Geotrypetes seraphini (Gaboon caecilian): 117355690
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Entry
117355690 CDS
T09159
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117355690 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117355690 (JARID2)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117355690 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
117355690 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Viral_env_E26
Motif
Other DBs
NCBI-GeneID:
117355690
NCBI-ProteinID:
XP_033790501
UniProt:
A0A6P8QVC6
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Position
2:complement(194654552..195186876)
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AA seq
1252 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKTAQKRQSDGINGSFKNPNG
LLVHVQSKGSGQSSENEKDDTSQGSSQANSVTSSDSEDGPIRKRPRLQAQRKFAQSQPNS
PSTTPIKLVEPLLPPPAAQISDISKRKPKTEDFLTFLCLRGSSALPSSMVYFGSSQDEED
VEEEDEETENVKSITNNTPSSCYSTPRKGKTHKNTPNGLVFNSSSKSSKERDSTHKHRSR
EATPGKERNSERAESRKEQTAAPNHHHPATNTNSSAKGLAANNHHTLHRSPQDLKKQVSK
VNGITRLSASSSNSASAKKMREVRTSPSKTAKYTATVTRGTVTYTKAKRELAKKTKLNHS
KPSSAINHTNSGKIESSNAKTRKQVLSLTAASKSSCATINCVQVNGKLSDKMCTREEGRQ
LREGLRNSKRRLEETNLVDKPQLPIKKTKVTSSLPEVRNRRTVAEKSVMNGHTKKEVPEK
TLERNRPKRATAGRNLPGKQAHDETENAACETLSTSHTDSLHKPHDSLGKQERVGKSEWP
VMVEIPVLQPSAKEFNDPLIYIESVRAQVEKYGMCRVIPPSDWRPECKLNEEMRFVTQIQ
HIHKLGRRWGPNVQRLACIKKHLKSQGICMDELPLIGGCELDLACFFQLINEMGGMQQVT
DLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSSEEHKKLEKEVLLEKETLEK
KKGPLEAHSDNAYKLLHSLPRFEPKNGLINGVVHKNGFRSKLKEMEIPLKTGRRRLFTQE
KESVVEEQEEEKGNFGELYKCVYKRAEVIGWRWKGMEIGTEDVRHFGGRSVSLTTFYRTA
RNIMNVCFNKDPAIAEIEQEYWRLVEKKNSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHG
WNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIW
YCIPAEEENKLDQVVHSLLQANGTPGLQMLESNVMISPEELCKEGIKVHRTVQQSGQFIV
CFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRHIAKPFSMEKLLYQIAAAE
AKKENGQSLGVVSSLLRELRDTELRQRQELFKAGLHSSARYGSHDMSVDGKKKPRKWLQL
ETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKHKSCRGLKLMYRYDEEQIISL
VNQICGKVNSRNGSSEDCISKATPKKGARKRATADVPSTRLSSSTSSRSSSS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaacataattcaaaagaaatatgatgacagtgatggg
attccatggtctgaagagagagtggttcgaaaggtgctttacctgtctcttaaggagttc
aagactgcacagaagagacagagtgatggcattaatgggagtttcaaaaatccaaatggg
ctccttgttcacgttcagtctaaaggatcaggacagtcatctgagaatgagaaggatgat
acgtcacaaggatcttcgcaggccaacagtgtgacctcttcagattcagaagatggccca
attagaaaaagaccaaggctgcaagcacaaaggaagtttgctcagtctcaacctaatagt
ccgagcacaaccccaataaagttggtggaaccattgttaccccctccagctgcccagata
tctgatatctccaaaaggaaaccgaaaacagaagatttccttacatttctctgcctaaga
ggttcttcagccctacccagctccatggtatattttggaagttctcaggatgaagaggat
gtcgaggaggaggatgaagagacagagaatgtgaaatcaatcacaaacaatactccatct
tcgtgctattcaacccccaggaaaggaaaaacacacaaaaatactcccaacggacttgtt
tttaatagctctagcaaatcttcaaaagagagagattctactcacaaacacagaagcaga
gaggccacacctgggaaagagcggaacagtgagagagctgagagtcgaaaggagcagact
gcagctccaaaccaccaccaccctgctacaaacacaaactcctcagcaaaagggctggct
gctaataaccaccatacccttcacagatctcctcaggacttaaagaaacaggtttctaaa
gtaaatggaattactcgactgtcagcttcaagttcaaattcagccagtgccaaaaagatg
agagaagtcagaacatcaccatccaaaactgcaaagtacacagcaacagtgaccagggga
actgtcacatacaccaaagccaagagagaactggcgaagaaaaccaaactgaaccatagc
aagcccagttctgccattaaccatacaaactcagggaaaatagaaagtagcaatgcaaaa
acccgcaaacaggtgctatccctcacagcagcgtctaagtccagttgtgctactattaac
tgtgtccaagtcaatggcaagttgagtgataaaatgtgcactagagaggaggggagacag
ctaagagaggggctaagaaattctaaaaggcgattggaagaaactaatcttgtagacaaa
ccacagctgcccatcaagaaaacaaaagtaacttctagcttgccagaggtgaggaacaga
aggactgtggcagaaaagtctgtaatgaatggacacacaaaaaaagaggtaccggaaaag
accttggaaaggaataggccgaagagggccacagcaggaaggaatttgccaggtaaacaa
gcacatgatgagacagaaaatgctgcctgtgaaaccctttctacctcacatacggactcc
ttacacaagccacatgactcactggggaaacaggaaagggtgggcaagtcagagtggcca
gtgatggttgagattcctgtcctccagcctagtgccaaggagttcaatgatccactgatc
tatattgagtcagtccgagctcaggttgagaagtatgggatgtgtagggttattccccct
tcggactggaggcctgagtgcaagctgaatgaagaaatgcgatttgtgacacaaattcag
cacatacacaaactgggcaggcgctggggacccaatgtacagcggcttgcctgcatcaag
aagcacctcaaatctcagggcatttgcatggacgagcttccactcataggaggctgcgag
ctagatttggcctgcttttttcaattgatcaatgaaatgggaggtatgcagcaagtaaca
gacctcaagaagtggaacaaactggcagacatgcttcgcatacccaaaactgcacaggac
agactggcaaagctacaagaggcctattgccagtacttgctttcctatgactccctctcc
tctgaggagcacaagaaactggagaaggaagtcctgctggagaaggagaccctggagaag
aaaaaaggtccacttgaagctcactctgacaatgcctacaagttgttgcattcactaccc
aggtttgaacccaaaaatggactcattaatggagtagttcacaaaaatggcttccggagc
aaactgaaagaaatggaaatcccattgaaaacaggtagacggcggctgttcactcaggaa
aaggaaagtgtggtggaggaacaggaggaggagaaaggaaactttggggaactttataag
tgcgtatacaaaagagctgaagtgattggttggaggtggaagggaatggagattggtact
gaagatgtcagacattttgggggaaggtctgtttctttaacaacgttttatcggacagca
aggaacataatgaatgtgtgcttcaataaggatcctgcaatagctgaaatagaacaagaa
tattggaggttagtggaaaagaaaaatagtcatgtagcagtgcattgtggaaaagtagat
accaacacccatgggagtggctttccagttgggaaatctgagccattttcgaggcatggg
tggaaccttactgtccttcctaataattcaggatccatcctgcgacatcttggtgctgta
cctggagtgacaattccttggctaaatattggcatggtcttttctacctcatgctggtct
cgagaccaaaatcaccttccatatattgactacttacacactggtgctgattgcatttgg
tattgcattcctgctgaggaagagaacaaactcgatcaagtggtacattcgctgctgcaa
gccaatggcactccagggctgcagatgcttgaaagtaatgttatgatctccccagaggag
ttgtgcaaagaggggatcaaggtgcatcgtactgtacagcaaagcggccagttcattgtc
tgctttccaggatcctttgtgtctaaagtatgttgcggctacagtgtttcagaaactgtg
cactttgctaccacccagtggacaagcatgggttttaagactgccaaggaaatgaagcgt
cgtcacatagccaagccattttccatggaaaaattactgtaccagattgcagcagcagaa
gcaaagaaggaaaatggtcagagtctgggtgttgtttcttcacttcttagagagctcagg
gatacagagctgaggcagcggcaagaactcttcaaagcaggtctgcattcttcagcccgc
tatggtagccatgatatgtcggtggatggaaagaaaaagcctcgaaagtggttgcagctg
gaaacgtcagagaggaggtgtcaggtttgccaacatctctgctacctatccatggtggta
caggagaatgagaatgttgtgttctgtctggaatgtgcgttgaggcacgtagagaaacac
aagtcttgtcgtgggctaaagctgatgtatcgctatgatgaggaacaaataatcagtcta
gttaatcagatctgtgggaaagtgaacagtagaaatggcagcagtgaggattgtatcagc
aaggcaacaccaaaaaaaggagctcgaaaaagggcaacagcagatgtgccatcaactaga
ctgtcatcttccacatcatccagaagttcatcatcatga
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