Geotrypetes seraphini (Gaboon caecilian): 117355691
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Entry
117355691 CDS
T09159
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117355691 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117355691 (MYO5B)
04131 Membrane trafficking [BR:
gsh04131
]
117355691 (MYO5B)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117355691 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117355691 (MYO5B)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117355691 (MYO5B)
mRNA cycle factors
P-body specific factors
117355691 (MYO5B)
Membrane trafficking [BR:
gsh04131
]
Others
Actin-binding proteins
Myosins
117355691 (MYO5B)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117355691 (MYO5B)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117355691 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Ac76
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117355691
NCBI-ProteinID:
XP_033790509
UniProt:
A0A6P8Q2T1
LinkDB
All DBs
Position
1:86712046..87402182
Genome browser
AA seq
1839 aa
AA seq
DB search
MSACELYTRYTRVWIPDPDEVWISAEIIKDYKEGDESLHLKLEDEKLYEYPLDSKTKQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
EDVICAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASSGLPEFKELMLTYAEDFFYTSQGGETAIDGVD
DADDFEKTRHAFTLLGVKEAHQMGIFKIIASILHLGNVEIHSERDGESSSISKRDEHLNH
FCKLLGVEHDQMEHWLCHRKLITTAETYIKTMSLQQAVNARNALAKHIYAQMFNWIVQHI
NKALHTTSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDRNWAQKLYDRHSSSHHFQK
PRMSNTSFIVSHFADKVEYQCDGFLEKNRDTVYEEQINILKASKYQLVADLFQEEKDTVR
PIPTSGKSKINIRSAKPALKTANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPND
EKLPFTFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKRDISQNDKK
LTCKSLLQDLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRV
KYRRMRQAAVVIQRYTRRHLARRLADFLRKTRAAIIFQKQYRMVRVHRIYQTIRKAALTI
QAFTRGMFTRRSYHELLLQHKAVILQKHLRRWMARRRFLLFRSAAVVVQCYFRRMKARRE
LKQLKIEARSAEHLKKLNIGMENKVVQLQRKIDEQSKDYKSLNEQLSMTILARTTEVEKL
QKELQQQQQSQQGGNQLASLQEEIEALRLELGRAHSERKILEDTHMREKQQLQKRVSDLE
EENVLLKHEKDDLNNRILCKSEDEFTQRTMKENLQMKKDLEEERSRHQNLVKEYSRLEQR
YDNLREEMTLIKQTPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDTMQQVEEFGLEKAA
MDMTVFLKLQKRVRELEHERRKLQTQLVKKEEQDNIKSQVIETNKQTASDQDTDLAYNNL
KRQELESENKKLKNELNELRKVIGDQATENGEEGYNLLLNQLKSANEELEVRKEEVLILR
TQIVNAAQQQEAGRNMETIASWPNSDKHVDQDDAIEAYHGVCETNRKTEDWGYLNEDGEL
GLAYQGLKQVARLLEAQLQAQSREHEEEVEILTTHIEALKEEAEKRQQVLLQALQLSPEA
QVEFGIQQEITRLTNENLDLKELVEKLEKNEKKLKKQLKIHMKKVQDLEASQEMVQVERR
QQEMTRQVTVQRKEKDFQGMLEYYKDDEPLLIRNLITDMKPQLVSATVPCLPAYILFMCI
RHADYVNDDQKVHSLLTSTINSVKKVLKKHNDDFQMTSFWLANTSRLLHCLKQYSGDEGF
MTKNTPKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGILQPMIVSAMLENESIQG
LSGMKPMGYRKRSSSMADSDNSYNLETVIRQLNVFNGIMCDHGLDPEIIQQVFKQLFYMI
NAVALNNLLLRKDVCSWSTGMQLRYNVSQLDEWLRGKNLHQSGAAQTMEPLIQAAQLLQL
KKKTEEDAEAICSLCTALTTQQIVKILNLYTPLNEFEERVTVAFIRNIQAQLQERNDPPQ
LLLDFKYMFPVLFPFTPSSITMDSIHIPASLNLEFLNNV
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctgcgagctctacacccggtatacacgggtctggattcccgaccccgatgag
gtttggatctcagcagaaatcattaaggattataaggagggagatgaaagcctgcacctg
aagctcgaagatgaaaagctctatgaatatcctcttgattccaaaaccaagcagttgcct
ttcttgcgtaaccctgacattctggtgggagagaatgacctgactgctctcagttacctc
cacgagcctgctgtcttacataatctgaaagttcgctttttggaatctaatcacatctat
acctattgtggtattgtacttgttgccattaatccatacgaacagttgccaatctacggg
gaagatgtaatctgtgcatacagtggccaaaatatgggagatatggatcctcacatcttt
gcggttgcagaagaggcttacaaacagatggccagagatgaaaagaaccagtccattatt
gtgagtggtgagtcgggagctggcaagacggtttctgccaaatatgccatgcgctacttt
gccactgttggtggctcagctagtgaaaccaatgtggaagagaaggtgctcgcttccagc
ccgattatggaggcgattggcaacgcgaaaacaaccagaaatgacaacagcagtcgcttt
gggaaatatattcagattggctttgacagaagatatcatatcattggtgccaacatgagg
acatatctgttggaaaaatcccgagttgtattccaggccgaagaggaacgtaactatcat
attttctatcaactctgtgcctcatccggtcttcctgagtttaaagagctgatgctgaca
tatgcagaggacttcttctatacttcacagggaggtgaaacagcgattgatggggtggat
gatgctgatgactttgagaagaccagacatgctttcacgcttcttggtgtaaaggaggct
catcagatgggtatttttaagattatcgcttccatcctgcatctcggaaatgtagaaatt
cattcggaacgtgatggagagtctagcagtatatcgaaacgggacgagcacctcaatcat
ttctgtaaattgctaggagtggagcacgaccagatggagcactggctgtgccatcggaag
ctcatcaccacagctgagacctacataaagaccatgtctttacagcaagcagtgaatgcc
aggaatgccctagccaagcacatctatgcacagatgttcaactggatcgttcagcatatc
aacaaagcccttcacactaccagcaaacagcattcattcattggggtccttgacatctat
gggtttgagacatttgaagtgaacagctttgagcagttttgtatcaactatgcaaacgaa
aagctgcagcaacagttcaactcgcatgtatttaagctggagcaagaggagtatatgaag
gagcaaatcccatggaccttgatagatttttatgacaaccaaccctgcatagatctcatc
gaagcaaaacttggaatcttggacctgctggatgaagagtgtaaggtccctaaaggcact
gatcggaactgggcccagaaattgtatgacaggcatagtagcagccatcactttcagaag
cccagaatgtctaacacctccttcattgtgagccattttgcagataaggtggaatatcag
tgtgatgggttcctagagaaaaacagagacactgtgtatgaagagcagatcaacatcctg
aaagcaagcaagtatcagctagtagcagacttgtttcaagaggaaaaagacactgtccgt
cctattcctacttctggaaaatcaaaaatcaacatccgttctgccaaaccagccttgaaa
accgccaataaggaacacaagaaaactgttggacatcagttccgtaactcgttacattta
cttatggagaccctgaatgcaacaacgccacattacgtccggtgtatcaagccaaatgat
gagaaactcccgtttacttttgatccaaagagagcagttcagcagctgagagcctgtggt
gtgttagaaacaatccgcatcagtgcagccggctatccttccaggtggacataccacgac
ttctttaaccgatatcgtgttctcatgaaaaagagggacatctcccaaaatgacaagaag
ctgacttgtaaatcgctgctccaggacctcatcaaggatcctgacaagttccagtttgga
cgtaccaagatctttttccgggcggggcaggtagcatacttggagaagctgcgagcagac
aagttccgtgctgccaccattatgatacaaaaaacagtgcgtggttggctgcagagagtg
aagtacagaaggatgagacaggctgccgtagtcatccagaggtacacgcgaagacatctg
gctcgcagattggccgactttctgcggaagacaagagctgccataatcttccagaaacaa
taccgcatggtacgggtccatcggatctaccagacgatccgcaaagcagccctcacaatc
caggcctttacaagaggcatgtttaccaggagaagttatcatgagcttctgctgcaacac
aaggctgtcatcctccagaagcacttgcggagatggatggctcggcgccggttcctcctc
ttccgcagtgccgctgtggttgtccaatgttacttcaggcgcatgaaagcaaggagagag
ctgaagcagctcaagattgaagctcggtctgctgagcacctgaagaagctgaacatcgga
atggagaacaaggtggtccagctgcagagaaagatagatgagcagagcaaagactataag
agcctgaatgagcaactgtccatgaccatcttggcacgtaccaccgaagtggaaaaattg
caaaaggagctacagcagcaacagcagagccagcagggagggaaccagctggccagccta
caggaggagattgaggccctccgacttgagcttggaagggctcatagcgaaaggaagatt
ctagaagatactcacatgagggagaagcagcagctacaaaagagggtatccgatctggaa
gaagagaatgttctcttaaagcatgaaaaagacgacctcaacaatagaatcctctgcaaa
tctgaagatgagtttacccaaagaactatgaaggaaaatctgcagatgaagaaggatctg
gaagaggagcgatcaaggcaccagaacctcgtgaaggagtactcaaggctggagcagaga
tacgacaacttgagggaggagatgacgctcataaagcaaaccccaggacacaggaggaac
ccatccaaccagagcagcctggaatctgactccaattatccttcaatctccacgtcagag
atcggggacactgaagataccatgcagcaagtagaggagtttggtttggagaaggccgcc
atggacatgaccgttttcttgaagctgcagaagagagtgcgggaactggagcacgaaagg
aggaagcttcagacacaactggtcaagaaggaagaacaagacaatataaaatctcaggtg
attgaaacaaacaaacaaactgcttccgaccaagatacagatctagcctacaacaatctt
aagaggcaggagctggaatcggaaaacaaaaaactgaaaaatgaactgaatgagctgagg
aaggtcattggcgaccaagccacggagaacggtgaggagggttataatttgctgctgaac
caactcaagtccgctaacgaagagctggaagtgcggaaggaggaagtgcttatcctgcgg
acacagattgtcaatgcagcccagcagcaagaggccggcaggaacatggaaaccatcgca
agctggccaaacagtgacaaacatgttgatcaggatgatgcgatcgaagcctaccatgga
gtctgtgaaacgaaccgcaagactgaggactgggggtacctgaatgaagacggggagctc
ggcctggcctaccaaggcttaaagcaagttgccagactcttggaggcccaactgcaggcc
cagagccgagagcacgaagaagaggtagagattctgacgacacatattgaggcattgaag
gaggaagcggagaagcggcagcaggtcctgctacaggctcttcagctgtcacccgaagcc
caagtggagtttggcatccagcaagaaataactcgactcacaaatgaaaatctggatctt
aaagagttagttgaaaaattggaaaagaatgagaagaagttgaagaaacagctgaagatt
cacatgaagaaagtgcaagatctagaagcatcccaagagatggttcaggtggaaaggcgg
cagcaggaaatgaccagacaggtgactgtgcagagaaaggagaaagacttccaagggatg
ctggagtactacaaagacgacgagccccttctcatccgaaacctaattacagacatgaaa
cctcagctggtgtctgccaccgtgccctgcctccccgcctacatccttttcatgtgcatc
aggcacgcggactacgtcaacgacgaccagaaggtgcactccctcctcacatcgaccatc
aacagcgttaagaaagtgctaaagaaacacaacgatgacttccaaatgacatctttctgg
ttggccaatacaagtcggctgttacattgtctgaaacagtacagcggtgatgagggcttt
atgactaagaacacacccaagcagaatgagcattgtctcaagaactttgacctcaccgag
tatcgccaggtcctgagtgacctctccattcagatatatcagcagctcataaagattgcc
gagggcatcctgcaacccatgatagtatcggcaatgctggagaatgagagtatccagggc
ttgtctgggatgaagcccatgggttacagaaagcgctcctccagcatggcggacagcgac
aactcttacaacctagagactgtaattcgccagctgaacgtcttcaacggcatcatgtgc
gaccatgggctggacccagagattatccagcaggtcttcaaacagctcttttacatgatc
aacgcggtggcactaaacaacctgctgctgaggaaggatgtctgctcctggagcacaggc
atgcagctcaggtataatgttagccagctggacgaatggctgcgtgggaagaatctacac
cagagtggggcggcacagaccatggagcctctgatccaggcggctcagctcctgcagctg
aagaaaaaaaccgaggaagatgctgaggcaatctgctccttatgtacagccctgaccacc
cagcagattgtgaagatacttaatctctacactccactgaatgagtttgaagaacgtgtg
acagtagctttcatacgaaatatccaagcacagttgcaagaacgaaatgacccaccacag
ctgctgctggatttcaaatacatgtttccagttctctttcccttcaccccatcttcaatc
accatggactccattcacatccctgcttctctcaacttggagtttctcaacaatgtatga
DBGET
integrated database retrieval system
