Geotrypetes seraphini (Gaboon caecilian): 117355894
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Entry
117355894 CDS
T09159
Symbol
RNF125
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125
KO
K12170
E3 ubiquitin-protein ligase RNF125 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117355894 (RNF125)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117355894 (RNF125)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117355894 (RNF125)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117355894 (RNF125)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf_C2HC_14
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
TRAF3_RING
Prok-RING_4
Rad50_zn_hook
zf-RING_6
zf-Nse
zf-rbx1
zf-RING_10
zf-RING_4
Sina_RING
zf-UDP
U-box
DUF2024
zf-C2HC_2
DUF7575
DUF7501
C1_4
Motif
Other DBs
NCBI-GeneID:
117355894
NCBI-ProteinID:
XP_033790871
UniProt:
A0A6P8QWD6
LinkDB
All DBs
Position
2:complement(130067721..130094100)
Genome browser
AA seq
217 aa
AA seq
DB search
MGSLLSGEGRVPQLEPSFDCAVCLQVLHQPVRTRCGHVFCHDCIARSLSNSMNACPYCRT
HLSSEGTPASDIIKKMKTVYQNCEECAEKVCLSEMRDHFNICQLYIEKYGQLEELVKAAS
SASRYTCPYCHEEFDEDTLMEHCLTYHGAERRLVICPICRLMPGGDPSYMRSFLRHLHFR
HSDHYEDYIDINIVEEAFIERVLNLSLLHYVRHSNPI
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgttgctgagcggcgagggccgggtcccgcagctggagccctctttcgactgc
gccgtgtgcctgcaggtgctgcatcagcccgtcaggactcgctgcgggcatgtgttttgt
catgattgtatagcaagaagtttatcaaacagtatgaatgcatgcccttactgccggact
catctgtcttctgagggaacacctgcttctgacataatcaagaaaatgaaaactgtgtac
caaaactgtgaagagtgtgcagaaaaggtctgtctgagcgaaatgagagaccattttaac
atttgccaactatacattgaaaaatatggacagctggaagaacttgtgaaagcagcatcg
agtgcttccagatatacttgcccatattgccatgaggagtttgatgaagatactttaatg
gagcactgtcttacctaccatggtgcagaaaggagattagtgatctgcccaatctgtcgc
cttatgcctggtggagacccatcctatatgaggagctttctaagacacctgcatttcaga
cattcagaccattatgaggattacatagacatcaacatagtggaggaagcatttattgaa
agagtgttaaacctgtcacttttacactacgtgagacattcaaaccctatataa
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integrated database retrieval system
