Geotrypetes seraphini (Gaboon caecilian): 117355908
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Entry
117355908 CDS
T09159
Symbol
CDH20
Name
(RefSeq) cadherin-20 isoform X1
KO
K06807
cadherin 20, type 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117355908 (CDH20)
Cell adhesion molecules [BR:
gsh04515
]
Cadherins
Major cadherins
117355908 (CDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
DUF202
Wzy_C
Motif
Other DBs
NCBI-GeneID:
117355908
NCBI-ProteinID:
XP_033790911
UniProt:
A0A6P8QWI1
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Position
2:complement(224203888..224485641)
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AA seq
930 aa
AA seq
DB search
MSSTGAGGQQPVKVKEQREGRSLETAGLRSRCLRSRTADAKRTWRSSWVTRFARGGGGRR
SLEGSDDDDDVRGRSCKREGKVVGEKEEEDTIIKRAVNSTLSSYHKSLSLVIFFFLIFRP
HTSSCDNIIIFKKMLWTVSRLQSGKSWFRLCFSLYSLMDLTATLSENPKPLSEASEDNLL
DTLFQHHRLKRSWVWNQFFVLEEYTGTDPLYVGKLHSDMDKGDGSIKYILSGDGAGTMFT
IDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLNG
PYAASVPEMSPVGTSIIQVIATDADDPTYGNSARVVYSILQGQPYFSVDSKTGIIRTALT
NMDREAREYYEVIIQAKDMSGLLGGLAGTTTVNITLSDVNDNPPRFLQKHYQMSILESAP
VSSTVGRVLAKDLDEGINAELKYSLVDGDGLDVFDIATDSKYQAGIITVRKPLNFETKRS
YTLKVEGANTQVEMRFLNLGPFRDTTTVHIGVEDVDEPPVFEASFYFVEVPEDVDIGTTI
QIVSARDPDVTNNSIRYSIDRSSDPGRFFYVDITTGALMTARPLDREDIAWHNITVLAME
MNNPIQIESVAITVKILDVNDNAPKFDKFYEAHVCENAKAGQLIDTVSAVDQDDPPEGQH
FYYSLAPEAENNPNFTLRDNQDNTAWILTRRSGYRQRSQNTFYLPILIADNGHPMLSSTG
TFTIQVCLCDNNGDQVSCSPEAYTLPISLSRGALLAILGCIFVLLVLVLFMLSMRRYRKQ
PYIINEDENVHENIVRYDDEGGGEEDTEAFNIAAMWNPREAQMLKTRQDIQPEIESLSRY
VPQTCMMHDNIHNYVLARLYEADIDFYTPPFDSLQTYMFEGDGSVAQSLSSLQSVSTDSD
QSYDYLTDWGPHFKKLAEMYGASDDNGALS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccggcgcgggcggacagcagccagtgaaagtgaaagagcagagggagggg
aggtccctggaaacggcagggctgcggagccgctgtcttcgctcccgaacggcagacgca
aagagaacctggcgctccagctgggtgacacgctttgctcggggagggggaggacgccgc
tctttggaaggtagcgatgatgatgatgatgtgaggggaagatcgtgcaaaagagaagga
aaggtggtcggagagaaggaagaagaggataccatcatcaaaagagctgtcaattcaact
ctctcttcctatcataaaagcttaagccttgtcatttttttttttttaatatttagaccc
cataccagttcctgtgataatattataatatttaaaaaaatgttgtggactgtaagtagg
ctccagagtggaaagagctggtttagactttgcttctctctgtattccttgatggatctg
acagccacactgtctgaaaatcccaaacctctctccgaagcctcagaagacaacctgctg
gatactctgtttcagcatcacaggctaaagcgaagttgggtatggaaccagttctttgtt
ctagaggaatacacaggcacggatcctttatacgttggcaagcttcattcagatatggat
aagggagatggatcaatcaaatacattctgtctggtgatggggctggcaccatgtttaca
atcgacgacaccactggtgacattcatgctattcagagactcgatcgagaagaaaggtct
cagtataccttaagggcccaggccctagacagaagaactggtagaccaatggaaccagag
tcggagttcatcatcaaaatccaagacatcaatgacaacgagcccaagttccttaacggc
ccctatgctgcttcagtgccagaaatgtcaccagttggtacctccattattcaagtaata
gcaacggatgccgatgaccctacctatgggaacagtgccagggtagtgtacagtattctt
caaggacagccgtatttctcagtggactcaaaaacaggcataattagaactgcactaaca
aacatggacagagaagcaagagaatactatgaagtgattatccaggccaaagatatgagt
ggtctgctgggaggattagctgggaccactactgtcaacatcaccctgagtgatgtcaat
gacaatccacccaggtttcttcaaaaacattatcagatgagcatattggaatcagctcca
gtcagctctactgtgggaagagtcctcgccaaggacttagatgaagggatcaatgctgag
ctgaaatacagccttgtcgatggagatggactggatgtctttgacatagcaactgatagt
aaataccaagctggtatcatcacggttagaaagcccttgaactttgagaccaagagaagc
tacactttgaaagtagaaggagccaacacacaggtggaaatgcgtttcttgaacctaggc
cctttccgggatacaacaactgtacacatcggcgtggaagatgtggatgaacccccggtg
tttgaggctagcttttattttgtggaagtgcctgaagatgtggacattggaacgacaata
cagatcgtgtctgccagggatcctgatgtgacaaacaattcaatcaggtattcaattgat
agaagcagtgatcctggacgatttttttatgttgacatcacaacaggagctctgatgacc
gcaaggcccctggacagagaagatatcgcctggcacaacattactgtgctagccatggaa
atgaataatcccatccagatagaaagcgttgctatcacagtgaaaatcctggatgtcaat
gacaatgctccaaagtttgacaaattctatgaagctcatgtctgtgaaaatgcaaaagct
ggacagctgattgacacagtgagtgctgtagaccaggacgacccaccagagggtcagcac
ttctactatagcctggctcctgaggcagaaaacaacccaaacttcactctaagggacaat
caagacaatacagcttggattttaactagaagatctggctatagacagcgttcgcagaac
accttctacctgcctatcctgattgctgataatgggcatcccatgctgagtagcactggg
acattcaccattcaggtgtgtctctgcgacaacaatggagaccaggtgtcctgcagccct
gaggcatacacactgccaatcagcctaagcagaggggcgctgcttgctatcctgggctgc
atctttgtcttgttagtgctggtactatttatgctatccatgaggagataccgaaaacaa
ccctatataattaatgaggacgaaaatgtacatgagaacattgttagatatgatgatgaa
ggcggtggggaagaagacactgaggcctttaacatcgctgccatgtggaaccctcgggaa
gcacaaatgctaaaaacgaggcaagatatacaacctgaaattgaaagcctctccagatat
gtgcctcagacatgtatgatgcacgacaatattcataactatgtactggccagactctac
gaggcagatattgacttctacacacctccctttgactctctgcagacatatatgtttgag
ggagatgggtctgtggcccagtctctcagttcactgcaatcagtcagtacagactcagac
cagagctatgattacctcactgactgggggccccactttaaaaagctggctgaaatgtac
ggagcctcggatgacaatggagctttatcataa
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