Geotrypetes seraphini (Gaboon caecilian): 117356402
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Entry
117356402 CDS
T09159
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117356402 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117356402 (HEATR1)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117356402 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
HEAT_EZ
Cnd1
RTP1_C1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
117356402
NCBI-ProteinID:
XP_033791447
UniProt:
A0A6P8PT69
LinkDB
All DBs
Position
3:complement(272835199..273528827)
Genome browser
AA seq
2153 aa
AA seq
DB search
MTSLAHQLKRLALPQNDPSLLIRKEAASLLFDCKEASDIDRDTFFAIGCTGLEELMGIEP
SFKAFQDTLFSHASKSLERSVQTKVANQQLDESIALFLTHLSPYFMLKPAQKCLEWLIYR
FHIHLYNQDSLIGCVLPYHETRIFVRVVQLLKIKDPTHKWNWLEPIQKPGVPLAHGTLVT
HSYKDLGFLDFICTLVTKAVKAFAEYPGSVPQLRVLFSFYASTIVATIDAAVKISDPLVA
KLLPYIQKGMKSSLVDYKAATYMIICQLAVKVVMEASLVQSFTSQICKTLTRKPSLLREG
LGCLVVLLQSQKMEGLDKKSFQHLCDLPDLVPTLQAMGVAYDITALLRYMLPGFIHSVVN
HSIEEADNDVFMRQLEAILTCIPLEKGLDQLLASTFLEQFLAYGTKNGADSEEMSMLRKR
LLPFIRLLERKYPAALDVVLEEGLNSVVGELGQDLFHQFLGLSTSGGKYQFLAESDTSLL
LSLNHPRPAIRCSAIQYLTEITQAGKEGFDESFVREALLVRLQDEDVDVILSALGALEVF
SEQISPKDKISSLLSLIQKLDLSSDERWYHVLEKVTDILMKIPTLTEDEEFSSQAVRKLL
PFLTITNRDSKSAELKLAIYLAKSGLCSLHPLLKGWPEALEKVLKNSKSARLLGAVNRRL
IQVLAGNIVSADPSVVSRMVADLLFVVADEHTGVRQKLTFFVVGHALVQVLTNSQLGENY
LKIALRSFSFLDRKLRSLMGHRTLEETPTDWLIDAVPKDPQPEKLLMEYILQLNAGQSAE
MLEMTLVAILLKDFVGALMPPESFSKGKQSWNPEILDEPSRDYLRLLVNLFDVIISGANE
GSNVGNFRQLLSVFFEGNVHLEEPEDLLGFLSILWTYNYSLSDLLGCTVSALLQTQALYI
GHVVLASQAPAKQKQLASASSPVVISVLANLRSPVREVRRGALGCLQSLGTVTESPFHPV
IQNLLQMTEEIIADPAFISQAFSSLFEDLETASKQKSSQRLAEALRQLLNCMQSPKCPSF
VAKVLMKVLQEVNGEAVLSQLLPTIGRLLERVKDEPMMILKDEAILLHLLLQKFHPRSAG
LLSKEPHSLELFITALQTMKALHHGLPTIQITALGQFTKQFFASIKEGKIQQKLLGVLFD
LLLNCKNPLCAQTVSSVFKGISVDAEQLSLELEPPEKAKSLSTVRQTRRQKSQQQRKLQD
LESTGEGGGSVNWQRVTLILELLQHKKKLLCPQLLVPTLFNLLSRCLEPAPEEQGSLEYT
KQLILSCLLNICQKLSPDGSRIPADVLDEERFNVELVVQCVRGSDVPQTNHHALMLLGTA
ATIFPDKVLHNIMPIFTFMGANIMRLDDMYSFHVISRTMLTVIPALIQADSGDSADTTDY
VENVVSKIIHVFVDAMPHVPEHRRVPILAQLVSTVGGERFLWILLVLLFEQHVTRTVTAV
SNGEKDVALEKDTELWILICCEFGVQDQLQSVIKILKYLMKLPENKDEDESEKLSRVRKA
KEKEPDKHLFNVASHSEKQLRHFKFLAISFLAQLLASCNFVGRVVEYEKAEELQDIEQRL
LEEVLCYLKTVADSVPENTEKPTAKFWRALLNKSYELLDKVNALLPTERFIPVIRGLMAS
QLPLVRRKAMELLNNKLQQHIKWQEDQIQLLLGLTGDLLSIVGRKADTEEEEQVINRQTA
LFSLKLLCRCFGASEQEVFVPVLSAAVELIRADGQEDKNMMGSALLCIAEVTSALKALAI
PQLPRLMPAILRTLKVRKELVSGEIYLLSAVTALQKVIETLPHFISPYLLDILLQIARLE
KVGLEMGPKSQLKLWIISLKSTLGTRIPSRIVLPTISKCYQQLVTSHRHCLGPLMDILKE
HIRNMDKQLLAFQQSELTAFFMKALDFRAEHSEDNLEDVGKTEGHIIDCLITMIMKLSEV
TFRPLFFRLFDWCKTEETSKDRLLTFYRLADQIADKLKGLFTLFAGHLVKPFAEHLNQLN
TMKTDKAFYESRNTEKSCLLLQFIFDCLHKIFLYDSQRFLSKERAEALMMPLVDQLENML
GEDDKFQERVTMYLIPCIAQFSVAMADDSLWKPLNYQILLKMRHASPKVRFAALLALTEL
AGKLRENYMILLPESIPFLAELMEDECEEVEHQCQKSIQQLEAILGESLQSYF
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgacttcattagcgcatcaattgaagcgtcttgccctccctcagaatgaccccagtctc
ctgattcgaaaggaagctgcatctctcctatttgactgtaaagaggcatcagatattgac
agagatactttctttgctattggatgtaccggcctggaggagcttatgggcattgaacca
tctttcaaagcctttcaggatacactcttcagccatgcgtccaaaagcctggagcgcagt
gtgcaaactaaagtggcaaaccaacagctagatgagagtattgctctatttctaacacac
ctctccccttactttatgctgaagcctgcacagaagtgcctagagtggctgatttacagg
tttcacatccacctgtacaatcaggatagtttgattggatgcgttttgccatatcatgaa
acaagaatatttgtaagagttgtccagctcctgaaaattaaagaccctactcataaatgg
aactggttggaacctattcagaaacctggtgttcccttggcccatggcactttagttaca
cacagctacaaagacctggggttcctggacttcatctgcactctagtgacaaaggctgtg
aaggcttttgcagagtaccctggcagtgtgccacaactaagggtccttttttccttttat
gcctccaccattgtggccaccatagatgcagcagtgaaaatctcagatcctctggttgcc
aaattgcttccctatatccagaagggtatgaagtcttcattggtggattataaggctgct
acatatatgataatctgtcagttagctgtgaaagtggttatggaggcatcccttgtgcag
tctttcacctcccagatctgcaagacactgaccagaaaaccctctcttcttagggaggga
ttgggctgtcttgtcgtgctcctacagagccagaaaatggaaggactagataaaaagtca
tttcagcacctgtgtgaccttccagacctggtccctactttgcaggcaatgggggtggca
tatgatatcacagctcttctgcggtacatgctacctggcttcattcattctgtggttaac
cactctattgaggaggctgataatgatgtgttcatgagacagctagaagccattcttact
tgcatacctctggagaagggcttagaccaattgttagccagtacgtttctggagcagttc
ctcgcctatggtacaaaaaatggggctgattctgaggaaatgtccatgttgaggaaacga
ctccttcctttcatcaggcttctcgagagaaagtatccagcagctttggatgtggttttg
gaggagggtctgaactctgttgtgggtgagctggggcaggacctcttccaccagttcctt
ggcctctctacaagtgggggaaaatatcagtttctggcagagtcagacacttctctcctg
ctgagcttgaaccatccacgtcctgcaatcaggtgctcagctatccagtacctaacagaa
atcacacaggcaggcaaggagggttttgatgagtcttttgttcgagaagctcttctggtt
cgtctccaggatgaggatgtggatgtgattctgtctgcacttggtgccttagaggttttt
agtgaacagattagtccaaaagacaagatttcaagtctgctgagcctcattcagaaattg
gatctctcttctgatgaaagatggtaccatgttctggagaaagtgacagacattttgatg
aaaattcccaccctgacagaggatgaggagttctccagtcaagcagtgagaaagctcttg
cctttcctgaccataaccaacagagattcaaaatctgctgagctgaaactagcaatctat
ctggccaagtctgggctttgcagtctacacccactgctcaaaggctggccagaagctctt
gagaaggtgctgaaaaacagtaagtcagcgaggctgctgggagcggtgaacaggaggttg
atccaggtgcttgctgggaacatagtctctgcagatccttcagtggtctctcgcatggtg
gcagatttgctgtttgtggttgcggatgaacatacgggtgtgaggcagaagttgaccttt
tttgtagttggccatgcactcgttcaagtattaaccaactctcaactcggtgagaattat
ctgaagattgctctgagaagcttcagctttttagacagaaaactaaggagccttatgggg
catagaactttggaggaaacacctacagattggcttatcgatgcagttcctaaggatccg
cagcctgaaaagctcttaatggaatatattttgcagctgaatgctggccagagtgcagag
atgctggaaatgactttagtagccattctgttgaaggattttgttggtgccctgatgcct
ccagaatctttttcaaaaggtaagcagagctggaacccagaaattctggatgagccatct
cgagactatctgcgcctacttgtgaacctatttgatgtcataatttctggagccaacgag
gggagcaatgtgggtaacttcaggcagctgttgagcgttttttttgaaggtaatgtacat
ctggaagaaccggaagatctgcttggattcctctccatcttgtggacatataactatagc
ctgtcagatctactgggctgcacagtgtctgccctcttgcagactcaagcactgtacatt
ggccatgtggtgcttgcatctcaggctccagcgaagcaaaagcagcttgcttctgcctcc
tctccagtagtaatttcagtgctggctaatctgcggagtcctgtgcgggaggtacgacgc
ggtgctcttggctgcctgcagtctctcggcacagtgacggagtctcctttccaccctgta
atacagaatctactacagatgactgaggaaatcatagcagatcctgctttcatcagccag
gcattcagcagtttatttgaggatctggaaacagcaagtaaacagaaatccagccagaga
ttagcagaggctttgcggcagctgctgaattgcatgcagtctcccaaatgtccttccttt
gtggcaaaggtcttgatgaaagtgcttcaagaggtgaacggtgaggctgtgctgtcccag
ttgctgcctacaataggtagactgctagagagagtcaaggatgagcccatgatgatactg
aaggatgaagctattctgctgcaccttctcctgcagaagtttcacccacgctcagcaggg
ctcctgagtaaggaacctcacagcctggagctattcatcacagcattacagaccatgaag
gcactccaccatgggctgccaaccatccaaatcacagcacttggccaattcaccaagcag
ttctttgcttccataaaagaaggaaagatacagcagaagcttctgggagtgctctttgac
ttactgttaaactgcaagaatcctctctgtgcacagacagtgagcagtgtcttcaaagga
atttcagttgatgctgaacagctgagcctggagctggagcctccagagaaggccaaaagt
ctttcaactgtccgacaaaccagaaggcagaaaagtcagcagcagagaaaactgcaggac
ctggagagtactggagagggaggaggcagtgtgaactggcagcgcgtgacccttattctg
gaacttcttcagcacaagaagaagctgctgtgccctcagctattggtgcctaccctcttc
aacctgctgtccaggtgtctagagcctgcgccagaagagcaggggagtctggagtacaca
aagcaattgattcttagttgtcttcttaacatttgtcagaaattatcacccgatgggagc
aggataccagcagatgtgctggatgaggaacgtttcaatgtggagctagtggtgcaatgt
gtgcgaggctcggatgtgcctcagaccaatcaccatgccctaatgctgcttggaactgca
gccaccatctttcctgacaaggtcctccacaacatcatgcccatctttactttcatgggg
gcgaacatcatgcgcctagatgacatgtacagtttccacgttatcagcaggaccatgctg
acagtcataccagccctcatccaggcagatagtggggactctgcagataccacagactat
gtggaaaatgtggtcagcaagatcatccatgtgtttgtggatgccatgcctcatgtgcct
gaacacaggcgtgtccccatcctggcacagcttgtgagtactgtgggaggagagcgcttc
ctgtggattctgttggtgttgctctttgaacagcatgtgacccggactgtgacagcagtg
agcaacggggaaaaggatgttgcattagaaaaggacacggagctctggatcttaatctgc
tgtgaatttggtgtccaagatcagcttcagagtgtcattaagattctgaaatatttgatg
aaactgccagagaataaagatgaagatgagtctgaaaagttgtcacgagtgcggaaggca
aaggagaaagaaccagacaagcatctttttaatgtggcatcgcactctgagaaacagctg
cgccacttcaagttcctggcgatctcctttctggcccagctgcttgcttcgtgcaacttt
gtgggaagggtggtggaatatgagaaagcagaagagctacaggacattgaacagagattg
ttagaagaagtactttgctacctaaagacagttgctgactccgtgccagaaaacacagag
aaaccaacagcaaaattctggagggctctgctcaacaagtcctatgagctcttagataag
gtaaatgccttgctgcctactgaaaggtttatccctgtgattcgaggattgatggccagc
cagctgcccttggtgcgaaggaaagcaatggagctcttgaacaataaactgcaacagcat
atcaaatggcaagaagatcaaattcagctgctcttaggactcactggagatctcttgtct
attgtgggtcgtaaggcagacacagaagaggaggaacaggtcatcaacagacagacagca
ctcttcagcctgaaactgctgtgccggtgctttggtgcatcagagcaggaagtgtttgtg
ccagtactgagtgcagctgtggagctgatcagagcagatggacaagaagacaagaacatg
atgggtagtgcactgctctgcatagcagaggttaccagtgcactgaaggcactggcaata
ccacagcttccaagattaatgccagccatccttcggactctgaaagttagaaaggagttg
gtttctggtgagatctaccttctaagtgctgtgacagccctgcagaaagtgattgagact
ttaccacacttcatcagcccttatctgctggatattctgctacagattgctcgtttagaa
aaggttgggcttgaaatgggtcctaaatcccagcttaaactatggataatatctctgaag
agcacactgggtaccaggataccttccagaattgtcttaccaaccatctcaaagtgttac
cagcagttggtgacttcacaccggcactgcctgggtcccctcatggacattctgaaagaa
catattagaaatatggataagcagctgcttgccttccagcagtcagaactgacagccttc
ttcatgaaagcccttgacttccgagctgagcattcagaggataatctggaagatgttgga
aaaacagagggccacatcattgactgtttaatcactatgatcatgaagctttctgaggtc
accttcagacctcttttcttcaggttgtttgactggtgcaagacagaagagacttcaaag
gacaggctgctgacattttatcgtctggctgatcaaatcgctgacaaactgaaagggctc
ttcacactctttgctggtcacctggtgaagcctttcgctgagcacctgaaccagctcaac
accatgaaaactgacaaagctttctatgagtccaggaatactgagaagagttgcctgttg
ctgcagtttatcttcgattgcctgcacaaaattttcctctatgatagccagcgtttttta
agcaaggagagagcggaggccttaatgatgccgttggtggatcagctggaaaacatgctt
ggagaggatgacaagttccaagagagagtaacgatgtacctaatcccttgtatagctcaa
ttttctgtagcaatggctgacgattccctttggaaaccgctaaactaccagattctgctg
aaaatgagacacgcttcaccgaaggttcgttttgctgcattacttgctttaacagaactg
gcagggaaactgagggagaactacatgatcctgttaccagaatctattccattcctagca
gagctcatggaagatgaatgtgaagaagtagaacaccagtgtcaaaagagcattcaacag
ctggaagctattcttggagaatcacttcagagctatttctga
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integrated database retrieval system
