Geotrypetes seraphini (Gaboon caecilian): 117356403
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Entry
117356403 CDS
T09159
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117356403 (NPHP1)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117356403 (NPHP1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
Nop14
NOA36
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
117356403
NCBI-ProteinID:
XP_033791448
UniProt:
A0A6P8QV09
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Position
3:367121716..367240198
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AA seq
693 aa
AA seq
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MALKTKRGPLQNLQRSTDDLKKQFDGLLDTLNQQEALEPANRTAIYQRCLWLKKSVEENK
ETLQNLKKTDEPAPVGNYDQRKQDEEKRLVKLAKQLEKLTVVLERENVTRDYTEDQKAQE
VSQTEQESDGEEDEDDDDDDSDEEESGEEDEVGDEGEDEDESDEEAATAKEFITLGDFQS
QQEGDLTFKKGEILQILDKKADGWWIAENCKGNKGLVPKTYLQVYKMETLRQEISEEEVE
GMDETTGNSPRRKSSRTGSVSQLNSARKAMAEMSATDALMTIGAIPAGFRASTLFHHLEE
GKQYHASSFLQPDLTPSQLTFKDLVWDPEKNSIQARQTHFSLILTLWSCKMIPLPGTSIQ
VLSRHIRLCLFDGNKVLSNIHTVRATWQPKNSKTWTFSPRVAGLLPSLLDGDCFVRSGLP
SPEIGILFELGVTYIRSSIGEKGELSCGWAFLKLFDSNGAPIPTKTYELPLNGGTPYEKG
IEVDPSIVRRANIGVFHQMMTLRKQPRLLVKLRSSDSRRREMLNLLPETLIGSLCNVHLL
VFYRQILGDTLLKDRVSRQNADLICSPVLATFPRLMEQPDIMDALRSAWAEKESTLKRPE
KRDGEFLKSVFLQVYHDSAYPLLQSTFLREPKWAEDEVEASRWKMIADFLKQSREHEGAL
YYLLSPESIHEAFDVSEITYNILSEVKKAVASV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaagacaaagagaggtcctctccaaaatttgcagagatctaccgatgatctg
aaaaagcagtttgatggtttgcttgatactttgaatcaacaggaagctctcgaacccgct
aacaggactgcaatctatcagagatgtctctggctgaagaaatcagtggaagaaaataag
gagacacttcaaaacttgaagaaaacagatgaacctgcgcctgtgggtaattatgatcag
aggaaacaggatgaagaaaaacgtttggtaaaactagcaaagcagctggaaaagctaaca
gtggtattggaaagggaaaatgtgaccagagattacactgaagatcagaaggctcaggag
gtttctcaaacagaacaagaaagtgatggagaagaagatgaagatgatgatgatgatgat
agtgatgaagaagaaagtggagaagaagatgaagtgggagacgagggtgaagatgaggat
gaatctgatgaagaggcagcaactgctaaggaattcattacacttggtgatttccagtct
cagcaagaaggggatctcacatttaagaaaggtgaaatcttgcaaatactcgataaaaag
gccgatggttggtggatagctgaaaactgcaaaggaaataaaggccttgttcctaaaacc
tatcttcaggtttataaaatggaaacactgagacaagaaataagtgaggaagaagtggaa
ggaatggatgaaactacaggtaactcccctagaagaaaaagctccaggactggttctgtt
tctcagttgaattctgcaaggaaggccatggcagagatgagtgccactgatgctctgatg
actataggagctatacctgcaggattccgagcatcgaccctcttccaccatctagaggaa
ggaaagcaatatcatgcaagttcctttttgcaacctgacctcacgccttctcaactgact
tttaaagatctagtttgggaccctgaaaaaaacagtattcaagcaagacagactcatttt
tcactcatcttaactctgtggagctgtaaaatgattcccttgccaggcacaagcatacag
gtgctcagcagacatatccgcctttgcctatttgatggtaacaaggtgttaagtaatatt
catacagttcgcgctacatggcagcccaaaaattccaaaacatggactttttcaccacgg
gttgcaggacttctgcccagcttgcttgatggtgattgctttgtcaggtctggtttacca
tctccagaaattgggatattgtttgaacttggagttacttatattcgaagttcaattggt
gaaaaaggagaactaagctgtggctgggcatttttaaaactttttgactctaatggagca
ccgattcctaccaaaacgtatgaacttcctttgaatggtggcactccttatgaaaaagga
attgaagtggacccatcaattgtaagacgagcaaatattggagtctttcatcagatgatg
acacttaggaaacagcctcgacttttggtgaaactaaggtctagtgactcaagaagacgt
gaaatgctgaatctgcttcctgaaacattgattggcagtctatgcaatgtgcatctgttg
gtattttaccgacagattcttggtgatacacttctaaaagacagagtgagcagacaaaat
gcagacttaatctgtagccccgttctagcaacttttccaagactcatggagcagcctgat
attatggatgcactcaggagcgcatgggcagaaaaagaaagtacattgaagagaccagaa
aagagagacggagagttcctgaaatctgtgtttcttcaggtgtaccatgattctgcatac
cctcttctccagtcaaccttcctcagagaaccaaaatgggcagaagatgaagttgaagct
tctcgctggaaaatgattgcagacttcttgaaacaaagccgagaacatgaaggagctctc
tattatctgctctctccagaaagtattcatgaagcttttgatgtttcagagataacatat
aatattcttagtgaagtaaagaaagctgtggcctcagtataa
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