Geotrypetes seraphini (Gaboon caecilian): 117356430
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Entry
117356430 CDS
T09159
Symbol
TRAPPC12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117356430 (TRAPPC12)
Membrane trafficking [BR:
gsh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117356430 (TRAPPC12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_6
TPR_8
TPR_17
ARM_TT21_2nd
TPR_16
Coatomer_E
RPN7
TPR_MalT
HEAT_Nup120
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
117356430
NCBI-ProteinID:
XP_033791508
UniProt:
A0A6P8Q5H4
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All DBs
Position
3:81965069..82202947
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AA seq
800 aa
AA seq
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METTKVITEQNERKTSAEDTGEIMNVTRECAFQDEDKVEKEEFIFHEETIDLDGDALESE
ENVTISDNSNNFLDKLNEQMMESVLISDSPNNSEDDVGELGCLQDIVEEMDAREDYRCEQ
VTGEKDSNILNNNKADMENTPEDDLHSPSEKLSLKEEEISEPTIDEQNVENETAINTQAE
DVSKSKPEQASVPYVSKPSPKDESIPVCTIFSQVSSQSPLLIHDGFEPQMVKSPSFGSGI
ETPGKPPPQIVQPSPSLSKFFADNGSTHSPASDFFDSFTTSSNFISVSNPNAGTAGLEKN
VTVPNKAVGGSQDCTSPKFFVGNSESCGVRRSAAALEIPQSPKPFSQMQTVFAGNDDPFA
TALNMSDLDRRHDAWLPSEETQAILISLSTQQYSTIFIDKDKLTMPGLKFDNIQGDAVRD
LMLRFLGEQAAQKRQVLTANSVEQSLEGLKQLISSKNWRAAVDLSGRLLTAHGQGCGKSG
QPTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFELFRNLDQPDLYYEYYLHVYPGRKGSM
VPFSMRVLHAELPQYVGNPQESLDRLHNMKTVCTKILDHLEKGLAEDGSMINITQSNRQA
SVQLWRSRLGRVMYSMANCLLMMKDFVLAVDAYRTVINYCPDQEPQLLSGIGRIFLQIGD
IKTAEKYFQKVEKVTQNLDGHQHKITVLMNRAFLSLGQNNFSEAHKSYTEILTMDPTNAV
ANNNAAVCLLYLGKLKDSLRQLEGLVQQDPKHYLHESVLFNLTTMYELESSRSMQKKQAL
LEAVAVKEGDSFNTQCLKLV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaccaaagtcatcactgaacagaatgaaaggaagacctcagcagaagatacg
ggtgagataatgaacgtgacaagagagtgtgcattccaagatgaagataaggtagaaaaa
gaagaatttatttttcatgaggaaaccatagaccttgatggagatgcattggagtcagaa
gaaaatgtgaccatctcagataattcaaataacttcctagataagcttaatgaacagatg
atggaaagtgtcttaatttcagattctcccaataacagtgaagatgatgtaggtgagcta
gggtgcctgcaagatattgtagaagaaatggatgccagagaggattacaggtgtgaacaa
gtgactggtgaaaaggacagtaacattctaaataacaacaaagctgacatggaaaataca
ccagaagatgatctccactcaccttccgaaaagctgtctttgaaggaagaggagatatca
gaaccaactatcgacgagcaaaacgtggaaaatgaaacagctattaatacacaagcagaa
gatgtatccaaaagtaaacctgaacaagcatcggtaccctatgttagcaagccatcccca
aaggatgagtccatcccagtatgtaccatctttagccaggttagttctcaatcaccgctg
ttgattcatgatggatttgaacctcaaatggttaaatctcccagttttggaagtggaatt
gaaactccaggaaaacctcctccacagattgttcaaccaagtcctagtctaagcaaattt
tttgctgacaatggaagcacacattcaccagcttcagatttttttgattcatttacaacc
tcgtccaactttatttctgtgagtaatccaaatgctggcactgcaggtctggaaaaaaat
gtcaccgttcctaacaaggcagtaggtggctctcaggattgcaccagccccaagtttttt
gtggggaacagtgagtcatgtggtgtccgaaggtctgcagcagcactcgagatacctcag
tctccaaagccattttctcagatgcagactgtttttgctggaaatgatgatccctttgcc
acagctctgaacatgagtgacctagacagaagacatgatgcatggcttccttctgaggaa
acacaagctattttaatttctttatcaacacagcaatacagcactatctttatagacaag
gataagctcaccatgccaggattaaaatttgacaacatacagggagatgcggtgagagac
ctgatgcttcgcttcctgggtgagcaggctgcccagaaaagacaagtgctgactgccaac
tccgtagagcagtctttggagggattaaaacaattaataagcagcaaaaactggagggca
gcagttgatctgagtggacgtcttctgactgcccacggtcaaggctgtggcaagagcggg
caacctaccagtcacacaacagattctttgcaactctggtttgtgaggctagcactgctg
gtaaagctgggtcttttccaaaatgctgaaatggaatttgaactgtttaggaacctagat
cagcctgatctttactatgagtattacctccatgtgtaccctggtcggaaaggttccatg
gttccattttccatgcgcgttttgcatgctgaacttccacagtatgttggaaatcctcaa
gagtcccttgacaggctacacaacatgaagacagtctgcacaaagatactggatcatttg
gagaaaggcttagcagaagatggaagcatgattaatattacacagagtaaccggcaggcc
tctgttcagctgtggaggtcacgtctgggccgggtgatgtactccatggcaaactgtctg
ctaatgatgaaggactttgtccttgctgtggatgcatatcgcacagtcatcaattattgt
ccagaccaggagcctcagctgctgagtggcattggaaggatcttccttcagattggagac
ataaaaactgctgagaaatattttcaaaaagtggagaaggtgacacagaatcttgatggg
catcagcataaaatcacagttttaatgaacagggcatttctttctcttggacagaacaac
ttttcagaggctcacaagtcctacacagaaattcttacaatggacccaactaatgctgtg
gctaataacaatgctgctgtttgcctgctttacctgggcaaactcaaggattctttgcga
cagttagaaggactagttcagcaggaccccaagcactacctccacgaaagcgtccttttc
aatctgaccaccatgtacgagctggagtcctctcgcagtatgcaaaagaaacaggctctg
ctagaggccgttgctgtcaaagagggtgatagttttaacactcagtgtctgaagctggta
tag
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