Geotrypetes seraphini (Gaboon caecilian): 117356442
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Entry
117356442 CDS
T09159
Symbol
LRFN2
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117356442 (LRFN2)
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117356442 (LRFN2)
Cell adhesion molecules [BR:
gsh04515
]
Immunoglobulin superfamily
SALM family
117356442 (LRFN2)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117356442 (LRFN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
fn3
LRR_9
Ig_2
LRR_14
Ig_DSCAM-DSCAML_C
LRRCT
Ig_C17orf99
GP79
Motif
Other DBs
NCBI-GeneID:
117356442
NCBI-ProteinID:
XP_033791537
UniProt:
A0A6P8PTG2
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All DBs
Position
3:394807152..395178793
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AA seq
767 aa
AA seq
DB search
MERLLCGVLVFGMAVMVNACPKYCVCQNLSESLGTLCPSKGLLFVPADIDRRTVELRLGG
NFIITISRQDFANMSGLVDLTLSRNTISYIQPFSFIDLESLRSLHLDSNRLSSLGDDILR
GLINLQHLIINNNQLCSISDEAFEDFLQTLEDLDLSYNNLKSVPWDAVKQMVNLHQLSLD
HNLIYHISEGTFAELHKLARLDLTSNRLQKLPPDPIFARSQFSTPTAATPFSPPLSLSIG
GNPLHCNCELLWLRRLEREDDMETCASPSSLKGRYFWYVREEEFICEPPLITQHTHKLLV
LEGQTASLKCKAIGDPSPVIHWVAPDDRLIGNSSRTAVYDNGTLDILITTSKDYGTFTCI
AANAAGESTAVVELSIIQLPHLSNGTGRAAPPKSRLSDITSSSKLNKGEAKFPPERAVVV
SEVTTTSVLVKWSVSKAAPKVKMYQLQYNCSDDEVLIYRMIPASNKAFVVNNLVPGTAYD
LCVLAIWDDTATTLTATNIVGCAQFFTKDDYPQCQSMHSQFLGGTMILVIGGIIVTTLLV
FIVILMVRYKICNNSQGKLATVSNVYSQTNGSNAVQNGVPPQVNPKVVVRNELMEFNCGS
VPSSASSSPSTTNSQEGDNCSLHSNQSTLSNKWRPVSRSKHNIDRLMGAFASLELRCQRK
EDTLDSHNSATAQHSDKKPLLGHQESKFCSLLTLPLEGKTKRSHSFDMGDVATTQCCTYP
RKITNIWTKRSLSVNGMLLQYVDNTELEGSATRESYGSAEWVMESTV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattgctctgcggagtccttgtgtttggaatggcggtaatggtcaacgcatgt
ccaaagtactgtgtctgtcaaaacttgtctgaatcacttggcacactgtgcccttccaag
ggtctcctctttgtgcctgctgacatagatcgaaggacagttgaacttcgacttggggga
aacttcattataaccatcagcaggcaggattttgccaacatgagcggcctagttgacctc
acgttgtctagaaacactattagctacatccaacccttttcatttattgaccttgagagc
ctgcggtctttacacttagacagtaataggttatccagccttggggacgatattttaagg
ggcttgataaaccttcaacacttgatcataaataacaatcaattgtgcagtatctctgat
gaagcttttgaggattttctacagaccttggaagacttggacctttcgtataataatctc
aagagcgtcccgtgggatgctgtaaaacagatggtaaacttgcaccagcttagcttggac
cacaatctaatttaccatatctcggagggaacatttgcagaacttcataagctggcccga
ctggatttaacttccaatcggcttcagaagctccctccagatcccatatttgcaaggtcc
cagttctcaacacctacagcggcaaccccgttttccccacctctgtctctaagcattgga
gggaacccactgcactgtaactgtgagcttttatggttgcgaaggcttgagagagaagac
gacatggaaacctgtgcatccccttccagtttaaaaggaaggtatttttggtatgtccga
gaggaggaatttatttgcgagccacctttgatcacacaacatacccacaagttgctggta
ctagaaggtcaaactgcatcattaaaatgtaaagccattggggacccttcccctgtcata
cactgggtggctcccgatgatcgacttattgggaattcttcaaggacggctgtctacgat
aatggcactttggatattctcatcaccacttccaaggattatggcacctttacgtgcatt
gcagccaatgctgctggggagtcaacagcagtggtagaattatctatcatccagcttccc
catctcagcaatggcacgggccgagctgctccgcctaaatcgaggctttctgacatcacc
agctccagcaagctgaacaaaggcgaggccaagtttccccctgagagggctgttgttgtg
tccgaggtgacaactacctcagtgctggtcaagtggtcagtgagcaaggccgccccaaag
gttaaaatgtatcaactacagtataactgctctgatgacgaagttctcatttacaggatg
attccagcttcaaataaagccttcgtggtaaacaaccttgtacctggaacagcgtatgac
ctctgcgtcttggccatatgggatgacaccgcaacgaccctcactgccaccaacatcgtg
ggctgcgcccagttcttcaccaaagatgactatcctcagtgtcagtccatgcacagccag
ttcttgggaggaactatgattttagtcatcggggggatcattgttacgactctgttggtt
ttcatcgtcatcctgatggtgaggtataagatctgtaacaattcccaaggcaagttggcc
accgtcagcaatgtctattcacagacaaatgggagtaatgctgttcaaaatggagttccg
ccgcaagtcaacccaaaagtggtagtgaggaacgagctaatggaatttaattgtggctcc
gttccgagcagtgcctcctcttcccctagcaccacgaacagccaagagggtgataattgc
agcctccacagcaaccagagcactttgtccaacaagtggaggccagtctcaaggtctaaa
cataacattgatcgactcatgggagcttttgcctctttggaactgaggtgtcaaagaaaa
gaggacacacttgactcccataattcggccacagcccaacactcggacaaaaagcctcta
ctgggacatcaggagtccaaattctgtagtctcctgacattacctctagaaggtaaaaca
aaacgcagccattcctttgacatgggggacgttgccaccacacagtgctgtacttatcca
agaaagattacaaacatttggactaagaggagtctttcagttaatgggatgctgttgcag
tacgttgacaatacagagctagaaggaagtgcgactagagagagttacggaagtgcagag
tgggtaatggagagcactgtgtaa
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