Geotrypetes seraphini (Gaboon caecilian): 117356634
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Entry
117356634 CDS
T09159
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117356634 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117356634 (NVL)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117356634 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_14
AAA_2
TIP49
AAA_28
Mg_chelatase
AAA_33
RNA_helicase
nSTAND3
NPHP3_N
Vps4_C
ABC_tran
AAA_17
Viral_helicase1
AAA_18
NACHT
Rad17
AAA_3
TsaE
nSTAND_NTPase5
NB-ARC
IstB_IS21
Zeta_toxin
Parvo_NS1
Sigma54_activ_2
DUF815
Motif
Other DBs
NCBI-GeneID:
117356634
NCBI-ProteinID:
XP_033792015
UniProt:
A0A6P8Q8T2
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All DBs
Position
3:complement(361398730..361611313)
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AA seq
873 aa
AA seq
DB search
MPQAATRAANRTRHGSRNHSGRDHAMPTVHARYLNSNRCGDYVDIGVLAADLQRVYSAEY
GRRKRNAFRIQVEKVFNVICSEKENDLEALEEEHLAKRVRQRPKGFRNPESYTEDSSDSE
CYPEYPPTNHMNNSLMSLYRKGYSDSTLSTPSKSDLRNITAPTLSVAGSEAPNVPGKTLK
DTRTSEGGWFIDKTPSRTVPEGFLIDLCEDEKGESKKAEDFLDCSNLASERKNKSKLRKG
KRKKEPENVDEVIESSLLSKRGKTQATELQHSSVRFADVGGNDDTLKEVCKLLIHMRHPE
VYQHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRE
LFEQAVTGAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNLADTAQVLVIG
ATNRPDSLDPALRRAGRFDREICLGIPDEAARERILHTLCRKLKLPNPFDFHHLAHMTPG
YVGADLMALCREAALCAVNRVLIKLEQQTLSTEALTNNHRENGLKVEEPDIKPQRLTELL
AKDELQRLLELLKEPTPLLEEQLQKLCIEMEDFIVALSSVQPSAKREGFATVPDVTWADI
GALEQIREELTMAILAPVRNPEQFKALGLAAPAGVLLAGPPGCGKTLLAKAVANESGLNF
ISVKGPELLNMYVGESERAVRQVFQRASNSSPCVIFFDEIDALCPRRSGHESGASIRVVN
QLLTEMDGLETRRQVFIMGATNRPDIIDPAILRPGRLDKTLYVGLPPSADRYAILKTITK
DGTRPPLEDDVNLKEIAYDQRCDCYTGADLSALVREASISALRQEMAQQHAQKNKGEIKV
SQKHFKEAFMKVKPSVSKKDQMLYEQLQQSLSQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagccgccacacgtgccgcaaatagaacacggcacggaagcagaaatcacagc
ggcagggatcacgccatgccaactgtgcatgcgcggtacttgaacagcaatagatgtggt
gattatgtggatattggagttcttgcggcagatcttcaaagagtgtacagtgcagaatat
ggtcgaagaaaacgaaatgcctttaggatccaagtggaaaaagtgtttaacgtgatctgc
agtgaaaaagaaaatgatttagaagcattggaggaagaacatctggcaaagagagtgagg
cagaggcctaaggggttcaggaatccagaaagctacactgaagactcctccgatagtgaa
tgttatccagagtacccgccaacaaatcacatgaataattcattgatgtccttatatcgg
aaaggatattctgattctactttatctacaccttccaaaagtgacctaagaaatatcact
gcccctacattatcagtggctggcagtgaagcaccaaatgttccaggaaagaccttgaag
gatactaggacatctgaaggaggctggtttattgataaaaccccaagcaggacggtccca
gaaggtttcctaattgatttgtgtgaagatgaaaagggagaatccaagaaagcagaggac
tttttagactgttctaatttggcaagtgaaaggaaaaataagtccaagcttaggaaagga
aagaggaaaaaagaacctgaaaatgtggatgaagtaattgaatcatctctgctgagcaaa
agaggtaaaactcaagccactgagctgcagcactcctctgtgaggtttgcggatgttggt
ggcaatgatgacacattgaaggaagtgtgtaagctgctaatccatatgcgacacccggag
gtataccagcacctgggcgtggttcccccccgaggcttccttttacatggtcccccagga
tgtgggaagaccctgctggcacaggcaatcgctggggagcttgaactgccaatgctgaaa
gttgcagctacagagatggtgtcgggtgtgtcaggagaatcggagcagaagctgagagaa
ctctttgaacaagctgtgaccggtgctccgtgtatactcttcattgatgaaattgatgcc
atcactccaaaacgagaagtcgcttccaaggacatggaacggaggattgtggcacagcta
ctcacctgcatggacgacttgaataatctggctgacactgcccaggtcctcgtcattggt
gcaactaaccggccagactcactggacccagcgctgagacgtgctggcagatttgatcga
gaaatctgcttggggattcctgacgaagcagccagagaacgcattctacataccctgtgt
aggaaacttaagctccccaacccctttgatttccatcacttggcacatatgacaccaggt
tatgtgggtgctgacctgatggctctttgtcgagaggctgcgttatgtgctgtaaaccgg
gtgctgataaaactggaacagcaaacactgtccacagaagccctcactaacaaccatagg
gagaatggtctgaaagtagaagagcctgacataaagccacagagactaacagagttgctt
gctaaggatgagttgcagaggctattggagctgctgaaggagccgaccccattgttagag
gagcagctgcagaagctctgtatcgagatggaagatttcattgtagccctgtcatctgtg
cagccctctgccaagagagaaggttttgccactgtccctgatgtgacatgggctgacatt
ggagccttagagcagatccgagaggagctcaccatggcaatactggctcctgtgcggaac
ccagagcagttcaaagctcttggcctagcagcacctgctggtgttcttcttgctggaccc
cctggttgtggcaaaacgttgctggcaaaggctgtggcaaatgaatctggcctgaatttt
atctcagtcaaaggtcctgaattgctaaatatgtatgtaggtgagagcgagcgagctgtg
cgacaggtgttccagagagccagtaactcttccccctgtgtgatattctttgatgaaatt
gatgctttgtgccctcgcagatctggccatgagtcaggggccagtatccgtgtggtcaac
caattactaacagagatggatgggctggaaacgcgacggcaagtcttcatcatgggggcg
accaaccggccagatatcattgacccagcaatcttgcgtccaggccgactggataaaact
ctgtatgtgggattgccaccatctgcagaccgttatgccattttaaaaactatcactaaa
gatggtacccgaccccctctggaagatgatgttaatctaaaagaaattgcttatgaccag
cgctgtgattgttacacgggcgctgatctttctgctctggtacgtgaagcctcaataagt
gcactgaggcaagaaatggcacagcagcatgctcagaaaaataaaggagaaatcaaggtt
agccaaaagcacttcaaagaagcctttatgaaagtgaaaccatcagtatcaaaaaaggat
caaatgctgtatgaacagttgcagcagtcactgagccagtaa
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