Geotrypetes seraphini (Gaboon caecilian): 117356651
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Entry
117356651 CDS
T09159
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117356651 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117356651 (PEX6)
Membrane trafficking [BR:
gsh04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117356651 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
nSTAND3
AAA_33
AAA_25
RNA_helicase
TIP49
RuvB_N
IstB_IS21
AAA_7
AAA_18
DUF815
AAA_14
AAA_11
AAA_28
Mg_chelatase
PEX6_4th
NPHP3_N
Rad17
AAA_29
bpMoxR
PhoH
RsgA_GTPase
Parvo_NS1
Vps4_C
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117356651
NCBI-ProteinID:
XP_033792049
UniProt:
A0A6P8Q6X6
LinkDB
All DBs
Position
3:412817556..413186928
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AA seq
993 aa
AA seq
DB search
MAELVLLEPFPAELSPLTALLVAEPTAASGGPLVVALQAPGERGPRLLVSAVLRAAEPGS
RRGPELRVSRLFLRRWGLEAGQRVALGAVLRPPALGWALLGARGRRGLRFALSERLAAAL
RAGPVLARRGEPLALLDDDELLLLESRPALQGLLGPRTRLAVTELGAASPRGAAAALGPR
PLVSAFARPPGRAARLRAAAVDAAALLRDGRLREAGGGGRRDRAAAVWVSRRCLLSLGLF
HGEWVRLRAGRGLRDGAGPSHLAVLLAAAGESLSSAGEDRALLCHALCFNLCGELEPELE
LQIERYCGELFMEKNEMKESHSSLSIPPVAKELYIEIVASPTYNIKEDYSEHLYHYFQTP
RLVQLGDVLCVPTCELPELLDGISERHFRCPDIFFKVKKIIGLVQVKQCVGYLADTENTI
LYQVGSTNGYIPSFPSPSGHVFWSSLSPAGLSVTVEEVCSILHPHVQDGGCVLLSGGAIL
LSGPSGVGKTSVVRAACSRLCLHLYKVDCVNLCKDSNDATEAKLQSTFSQANLYRPCVLL
LRNIDLLGRVYDGFGEDPRIISALCQLLLQPSRSHSVLPVLVIGTTCRLIDVAPSVQTAF
MHDVKLEAPSEEQRNFLLRALMTSLPLSKDLNLAKLAKRTAGFVLGDLCALLSYTGRAAC
TRLQNACVATGMSDECEGGLLAAGYPMLSEDFELALNQLHEVHSQAVGAPKIPSVYWQDV
GGLQDVKREILDTVQLPLEHPELLSLGLRRSGLLLFGPPGTGKTLLAKAVATECAMTFLS
VKGPELINMYVGKSEENVREVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVS
QMLSELDGLHSSADVFVIGATNRPDLLDPALLRPGRFDKLLFVGLNDDRESQLRVLKAIT
RKFKLDPFVSLSSILEKCPQQLTGADLYALCSDAMMSAIKRKMVCLGQGMDTEKSELVLS
TEDFLQAAATLQPSLSEHDLLPYRLLQQNFAVR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtgctgctcgagccctttcccgccgagttgtctccgctgacggcgctg
ctggtggccgagccgacggcggcctcgggcgggccgctggtggtggcgcttcaggcgccg
ggggagcgcgggcctcggctgctggtgagcgccgtgctgcgggctgccgagccgggctcg
cgccggggcccggagctgcgggtctcgcgcctcttcctgcggcgctgggggctcgaggcc
gggcagcgggtggcgctgggcgccgtgctccgccctccggcgctgggctgggcgctgctg
ggcgcgcggggccggcgcggcctgcgcttcgccctgtccgagcggctggcggcggcgcta
cgggccgggccggtgctggcgcggcgcggggagccgctggcgctgctcgacgacgacgag
ctgctgctgctcgagagccgtccggcgctgcaggggctgctggggccgcggactcgcctg
gccgtcaccgagctgggcgccgcctcgccccggggggccgccgccgccctcgggccccgg
ccgctggtgtcggccttcgcgcggccgccgggccgggccgcgcgcctgagggcggcggcg
gtggacgcggcggcgctgctgcgggacgggcgcttgcgggaagcgggcggcggcgggcgg
cgggaccgggcggcggcggtgtgggtgagccggcgttgcctgctcagcctcggcctcttc
cacggcgagtgggtgcgcttgagggcggggcgggggctgcgggacggcgcggggccgagc
cacctggccgtgctgctggcggcggccggggagtcgctgagctcggcaggcgaggaccgg
gcgctgctgtgccacgcgctctgcttcaacctgtgcggggagctggagccggagctggag
ctgcagatcgagagatactgtggggagctttttatggaaaaaaatgagatgaaagaaagt
cattcttctttgtccatcccaccggttgccaaggaactatacatagagatagtggcctca
cctacatacaacatcaaagaggattacagtgaacatctgtaccactacttccaaactcca
agattggttcagcttggggatgtcttgtgtgttccgacttgtgagctgcctgagttactg
gatggaatttctgagagacatttcagatgtcctgatatcttctttaaagtgaaaaaaatt
attggacttgtacaagtgaagcagtgtgttggatacttggcagatacagaaaatactatc
ctctatcaggttggctccactaacggttacattccctccttcccatccccgagtggccat
gttttttggagcagtttgtctcctgctggactctctgtaacagtagaagaagtctgcagt
attctccatcctcatgtacaagatgggggatgtgtactactaagcgggggcgctattctc
ctgtctggacctagtggcgttgggaagacatctgttgtccgtgctgcttgcagccgcctc
tgtctccacctttataaggttgactgtgtaaacttgtgcaaagactcaaatgatgctaca
gaggcaaagctgcagtcgactttctcacaagctaatctatatcgtccatgtgttctgctc
ttgagaaatattgacttgcttgggcgtgtgtatgacggatttggagaagaccctagaatc
atatctgccctctgtcagctactattacagccaagcaggtcacacagtgttcttcctgtg
ctggtgattggaaccacatgcaggctcattgatgttgcacccagtgtacagactgctttc
atgcatgatgtgaaacttgaggcaccttcagaggaacagaggaatttccttctcagagca
ctgatgacatctcttccactgagtaaagacctgaacttggctaagctggcaaagagaaca
gcaggctttgtcttgggggatctttgtgctttgctttcttacactggtcgagctgcctgt
acccgtctccagaacgcctgtgtggcaactggaatgagtgatgagtgtgaaggaggcttg
ctggctgctggataccctatgctttctgaagattttgaacttgctctgaatcagctgcat
gaagtacattcgcaagcagtaggagcacccaagattccttcagtatactggcaagatgtt
ggaggactccaggacgtgaagagagagatactggacactgtgcagttacctctggagcac
cctgagctgttgtctttgggacttcgacgttctgggcttctgttgtttggcccccctggt
actggcaagaccctgttggcaaaagcagtggcaacagagtgtgctatgacttttctgagt
gtgaagggtccagaattaataaacatgtatgtgggaaagagtgaggaaaatgttcgtgaa
gtgtttgccagagccagggcagctgctccttgcattatattctttgatgaactggactct
ctggctccaaaccgtggcaggagtggagactcaggtggtgttatggacagagttgtgtca
cagatgctgtctgagcttgatggacttcattccagtgctgatgtttttgtcataggcgct
acaaacagacctgatctccttgacccagcactgcttcgacctggccggttcgataaattg
ctctttgtgggactaaatgatgatcgagaatcccaactccgcgtgctgaaggctatcaca
agaaagtttaaactggatccatttgtgagtctctcaagcatccttgaaaaatgccctcag
cagctgacaggggcagacctgtatgcactgtgttctgatgctatgatgtctgctattaag
agaaagatggtgtgcctaggacaagggatggacacagagaaatctgaacttgttctcagc
acagaggatttcttgcaagctgcagctacgcttcagccttctctttcagaacacgacttg
ctcccctacaggctcctgcagcagaattttgctgtacggtag
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