Geotrypetes seraphini (Gaboon caecilian): 117356655
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Entry
117356655 CDS
T09159
Symbol
HNRNPU
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117356655 (HNRNPU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117356655 (HNRNPU)
Spliceosome [BR:
gsh03041
]
Common components
Common spliceosomal components
hnRNP proteins
117356655 (HNRNPU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
Zeta_toxin
AAA_18
Motif
Other DBs
NCBI-GeneID:
117356655
NCBI-ProteinID:
XP_033792064
UniProt:
A0A6P8Q6Z0
LinkDB
All DBs
Position
3:287621404..287766801
Genome browser
AA seq
803 aa
AA seq
DB search
MSSPLCVKKLKVSELKEELKKRRLSDKGLKADLMERLQAALDEEQAGRPGNGAGESVEGA
GGDSAEAGFEEEEETAAGEEEEEEEAAAGGGEQTDPGEEAATCAGENGSRPKAGAQKAVG
SGEETADQAMEDENGDDQGFQEGEEEEDEGIPMGEEDEDDDDVGDENKQRSGGSAAGKLG
DKRGLQKDRKAEAGGSSKSEGDGKGEQKAGEKKRGVKRPREDHGRGYFEYIEENKYSRAK
SPQPPVEEEDEHLDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRASYGVS
KGKVCFEMKVTEKIPVKHLYTKDIDIHEVRVGWSMSTSGMLLGEEPNSYGYSMKGIKVSN
CETEDYGEKFDENDVIACFANLEGDEIELSYAKNGQDLGVAFKITKETLADQALYPHVLC
HNCAVEFNFGQMAQPYFPVPEAYTFIQKIPLENRVRGPKGPEQKKECEVVMMVGLPGAGK
TTWVSKHAAENPGKYNILGTNTIMDKMMVAGFKKQMAETGKLNTLLQRAPQCLGKFIEIA
ARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPTDEEYKLRTQKKAEVEGKDLPE
HAVLKMKGNFTLPDAGECFDEIIYVELQKEEAQKLLEQYKEESKKALPPEKKLNTGSKKN
NKKSSKNQFNRGGGGGGSTSGHRGRGGGGYSMRGGNFRGGVPGNRGGYNRRGNMPQRGGG
SGGGAIGYPYPRGPVYPSRGGYANRGNYSRGGLPTRGNYNQNFRGRGNNRGYKNHSQGYS
QWQQQGQFWGQKPWNQQYHQGYY
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcccttgtgcgtaaaaaagctgaaagtgtccgagttgaaggaggagctcaaa
aaacggcgtctctccgacaaaggactgaaggccgatctcatggaaaggctacaggccgcg
ctcgacgaggagcaggctggacgacctggcaatggggccggggagtccgtggaaggcgcc
ggcggggattctgcggaggcgggctttgaagaagaagaggagaccgctgcgggtgaagaa
gaggaggaagaggaggccgctgctggtggcggagagcaaacggatccaggggaggaggcg
gcgacctgcgcgggagagaatgggtcccggcccaaggcgggagcccagaaggccgtgggc
agtggcgaggaaacggccgatcaggcgatggaggatgagaatggtgatgaccaaggtttt
caagagggcgaggaggaagaagacgagggtatccctatgggtgaagaggacgaggatgac
gacgacgtgggtgatgaaaacaagcagcgctcgggaggcagtgctgcgggaaagcttgga
gacaagagagggctgcagaaggaccgtaaagcggaggcaggaggcagctcgaaatctgaa
ggagatggaaagggtgaacagaaggcaggagagaagaaaaggggcgttaagagaccacgt
gaggatcatggccgtggctattttgaatatattgaagaaaataagtatagcagagccaaa
tctcctcaaccaccagttgaagaggaggatgagcacttggatgatacagtggtttgtctt
gatacttataactgcgatcttcacttcaaaatctcaagagatcgtttaagtgcatcttct
cttaccatggaaagctttgccttcctgtgggctggaggaagggcttcctacggggtttct
aaaggcaaagtctgctttgagatgaaggtcacagagaagataccagtcaaacatttgtac
acaaaagatatagatatccatgaggtgcgtgtgggctggtccatgagtaccagtggaatg
ctgctgggcgaggagccaaattcatacggttactctatgaaagggataaaagtaagcaac
tgtgaaactgaagactatggtgaaaaatttgatgaaaacgatgtcatcgcatgttttgct
aaccttgaaggtgatgaaattgaactttcctatgcaaagaacggacaagatctgggtgtt
gccttcaaaatcaccaaggagaccctggctgatcaggctctgtatccacacgtactctgc
cacaactgtgcagtggaatttaactttggtcagatggcacaaccatactttccagtacct
gaagcctacacgtttattcagaagattccactggagaatcgggtcagaggtccaaaggga
cctgagcagaagaaggaatgtgaggttgtgatgatggttggtttgcctggagcaggaaaa
acaacatgggtttccaaacatgcagcagagaatcctgggaagtacaatattcttggcaca
aataccatcatggacaaaatgatggtggctggtttcaagaagcagatggctgaaactgga
aaattgaacacactgctgcagagagccccacagtgtcttggcaaattcattgagattgct
gctcgcaagaaaaggaactttatcctggatcagactaatgtttctgcagctgctcagagg
agaaaaatgtgcctctttgcaggctttcagcgcaaggcagttgtggtgtgtccaacagat
gaagaatacaagttgcggacacaaaagaaggcagaagtggaagggaaagatcttcctgag
catgctgttcttaaaatgaaagggaacttcacgctgcctgatgcaggggaatgctttgat
gaaatcatttatgtggagctacagaaggaagaggcccaaaagctcttggagcagtacaag
gaggaaagcaaaaaggctcttcctccagaaaagaagctgaacactggctctaaaaaaaat
aataaaaaaagcagcaaaaatcagttcaatagaggaggtggtggcggcggcagcactagt
gggcacagaggtcgtggcggtggaggatatagcatgcgtggaggcaacttccgaggtgga
gttccagggaaccgtggtggatacaacaggcggggaaacatgccacagcgaggaggtgga
tctggtggtggtgcaattggctatccatatcctcgtggtcctgtttatccaagcaggggt
ggctatgccaaccgaggaaattacagtcgaggtggcttgcccaccagggggaactataac
cagaatttcagaggaaggggaaataatcgtggctacaaaaatcactctcagggctacagc
cagtggcagcagcagggtcaattttggggtcagaagccatggaaccagcagtatcaccaa
ggctattactga
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