KEGG   Geotrypetes seraphini (Gaboon caecilian): 117356775
Entry
117356775         CDS       T09159                                 
Symbol
XPO1
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008  Ribosome biogenesis in eukaryotes
gsh03013  Nucleocytoplasmic transport
gsh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117356775 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    117356775 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117356775 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117356775 (XPO1)
   03009 Ribosome biogenesis [BR:gsh03009]
    117356775 (XPO1)
   03016 Transfer RNA biogenesis [BR:gsh03016]
    117356775 (XPO1)
   03036 Chromosome and associated proteins [BR:gsh03036]
    117356775 (XPO1)
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     117356775 (XPO1)
Ribosome biogenesis [BR:gsh03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    117356775 (XPO1)
  Pre-60S particles
    117356775 (XPO1)
Transfer RNA biogenesis [BR:gsh03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117356775 (XPO1)
Chromosome and associated proteins [BR:gsh03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117356775 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 117356775
NCBI-ProteinID: XP_033792328
UniProt: A0A6P8Q7Q0
LinkDB
Position
3:complement(336896016..337451235)
AA seq 1071 aa
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILETVIKSRWKILPRNQCEGIKKYVVGLIIKTSSDATCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEVFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVNRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCEILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKINA
PLNPGNPLNNQLFVQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggatttcagc
cagaagcttgatatcaatcttttggacaacgtcgttaattgtctgtaccatggagaaggg
gcacagcaaagaatggcacaagaggtattgactcacttaaaggagcatcctgatgcatgg
acacgtgttgatacaattttggagttctcacagaatatgaacaccaaatattatggacta
caaatattggaaactgtgataaaatcaagatggaagattttaccaagaaaccagtgtgaa
ggaataaaaaaatatgttgtgggcttaattattaaaacttcatctgatgcaacatgtgtt
gagaaagagaaggtatatatagggaagctgaatatgattctcgtccagatactgaaacaa
gagtggccaaagcattggccaacctttattagtgacattgttggggcaagcaggacaagt
gaaagtctttgtcagaacaacatggtaattcttaaactattgagtgaagaggtgtttgat
ttctccagtgggcagataactcaagtaaaggctaaacatttaaaagacagtatgtgtaat
gagttttcacaaattttccagctctgtcaatttgtgatggaaaattcccaaaatgctcct
cttgttcacgcaacattggaaactttgctgagatttcttaattggattccactgggatac
atctttgagactaaactaatcagtacattaatatataagtttttaaatgttcccatgttt
cgaaatgtctctctgaagtgcctcactgagatagcgggtgtgagtgtaagccagtatgaa
gagcagtttgtgacattgttcacattgaccatgatgcagctaaaacagatgcttccttta
aatacaaatattcgtcttgcatattcaaatgggaaggatgatgaacagaacttcattcag
aatctcagcttgtttctttgcacctttctgaaggaacacggtcagcttatagaaaagagg
ctaaatttgagagaaactttaatggaggcccttcattatatgttacttgtgtctgaagtg
gaagaaactgaagtttttaagatatgtcttgaatactggaatcatttggctgctgagtta
tacagagagagtccattttcaacatcggcttccccattgctttctggaagtcaacatttt
gatgttcctcccaggagacaactttatttgccagttctgtctaaggtccgtttattaatg
gttagtcgaatggcaaaaccagaagaagtactggttgtggaaaatgatcaaggagaagtg
gttcgagagttcatgaaggatacagattccattaacttgtacaaaaatatgagggaaaca
ctggtttatctcactcatctggattatgcggacactgaaagaataatgacagaaaagctt
cataatcaagttaatggaacagaatggtcatggaaaaatttgaatacgctgtgctgggct
ataggctcaatcagtggagctatgcacgaggaagacgagaagagatttcttgttactgtt
ataaaggatcttttgggactctgtgaacaaaaacgaggaaaagataataaagcaattatt
gcttcaaatatcatgtatattgtaggtcaatacccaaggtttttgagagctcactggaag
tttttgaagacagtagtcaacaagctgtttgagttcatgcatgaaacacacgatggtgtt
caagacatggcttgtgatacattcataaaaatagctcagaaatgccgcagacattttgtt
caggttcaagtgggagaggtgatgccatttatagatgaaattctgaataacattaacact
atcatttgtgaccttcagccacagcaggttcacacattttatgaggctgtgggttacatg
attggtgcacagacagaccagaccgttcaagaacatttaatagaaaaatatatgttgctt
cccaaccaagtatgggatagtataattcaacaggcaacaaaaaatgttgatatccttaag
gatcctgaaacagtcaagcaacttggcagcattttgaaaacaaatgtaagagcctgcaaa
gctgttggccaccctttcgtaattcagttgggaaggatatatttagatatgctgaatgtg
tacaagtgcctaagtgaaaacatttcggctgctattcaagctaacggtgaaatggttaca
aaacaacctttgatcagaagtatgagaacagttaaaagggaaacactgaaactaatttct
ggttgggtgaacagatctaatgatcctcagatggtggctgaaaactttgttcctcctcta
ctggatgctgttcttattgattaccagagaaatgtacctgctgcaagagaaccagaagtt
cttagtacaatggctattattgttaacaaattgggaggacatattacagctgaaatacct
cagatatttgatgctgtgtttgaatgcacattaaatatgataaataaggactttgaagaa
tatcctgaacacagaacaaactttttcttgctacttcaggctgtaaattcacactgtttt
ccagcatttctggccattccccctgcacagttcaagcttgttttggattcaattatttgg
gctttcaaacatactatgagaaatgttgcagacacaggacttcaaatactttatacttta
ctacaaaatgttgcacaagaagaagctgctgcacagagtttctatcaaacctatttctgt
gaaattcttcagcacatcttttctgttgtaacagatacctcacacactgctggtttgaca
atgcacgcctcaatccttgcatacatgtttaacttagtggaagaaggaaaaataaatgca
ccattaaaccctggaaatccacttaataatcaattatttgttcaagattatgtggctaat
cttcttaaatctgcctttcctcatctgcaagatgctcaggttaagctgtttgtcacagga
cttttcagtttgaaccaggatattccagctttcaaagaacatcttcgggattttcttgta
cagatcaaggaatttgcaggtgaagatacatctgacctatttttggaagaaagagaaaca
gcccttcgacaagctcaggaggagaaacataaacttcaaatgtctgtccctggcatcctt
aatcctcatgaaattcctgaagaaatgtgtgattaa

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