Geotrypetes seraphini (Gaboon caecilian): 117356845
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Entry
117356845 CDS
T09159
Symbol
XPO5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117356845 (XPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117356845 (XPO5)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117356845 (XPO5)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117356845 (XPO5)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117356845 (XPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
117356845
NCBI-ProteinID:
XP_033792499
UniProt:
A0A6P8Q896
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All DBs
Position
3:complement(372248751..372398553)
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AA seq
1205 aa
AA seq
DB search
MSEEQVSSLCEQLVKAVTVMMDPSSSQRYRLEALKFCEEFKEKCPICVPCGLKLVEKTQT
AIVRHFGLQILEHVVKYRWNSMPRMEKVYLKNVVIWLISNGIQSILEEESHIKDVLARIV
VEMIKREWPQHWPDMMTELETLSKQGETQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQ
TLAQNMDKIFNFILLILQQSVNKYRRLKGDPGQESKVQANCRVAVAVLNTLAGYIDWVAM
VHITADQCKLLEMLCLLLNEVELQVEAAECLLIAVSRKGKLEDRKPLMVLFEDVAMHYIL
SAAQVANGEGLVEKHYVFLKRLCQVLCALGSQLCALVGLDYDVDVPANFGKYLDSFLDFT
IHPSQFLRSSTQITWGALFRHEVLSQDPLLKATVPKYLRACMTNLVKVGFPSKTDNASCV
YSRFDFDSDEDFNAFFNSFRAQQGEVVRMACRLDPKTGFQMAIEWLRFQLTAPVDVGTLN
SKTGEGLCSIFSPSFVQWDAMTFFSESVISQMFRTLNKEEIPVNDGIELLEQVLNFETKD
PLILSCVLTNVSALFPFVTYRPEYLPQVLSKLFASVTFEVIEESKAPRTRAVKNVRRHAC
SSIIKMCRDYPQLVLPNFEMLYKHVKQLLGNELLLTQMEKCALMEALVLISNQFKNYERQ
RAFLEELMTPVASLWLSDEMSRMLSSPEAFISYVGADKEINDPVLEDPSGLNRSRISFCV
YTILGVVKRARWPSDLEEAKAGGFVVGCTPCGNPIYRNPCTEQVLKLLDNLLALIRTHNN
LYMPEMVTKLAEPFSRALDMLEVEKNAILGLPQPLLELYDSPVYKTVLERMQGFFCTLYD
NCFHILGNAGPSMQQDFYTITSLADQLLNSSFISLNNIPDYRLRPMLRVFVKPLVLSCPP
EYYETLVCPILGPLITYLQLRLSQKWQIINQSSMLSDEDTADENPESQEMLEEQLVRLLT
REVMDLISVCCVSKKSTDHSTTGADGEDEEMMCTDVAPPSSAEMTELGKCLMKQEDVCMA
LLITSFTSLSWKDTLSCQRTTTHICWPLLKQVIAGILLSDAVTWFFISVLKGLQMHGQHD
GCMAALVHLAFHIYETLRPRYPELKAVMELIPDIQKESLEQFDSKLLNATLQKIADKKRK
EHFKRLISGCIGKPLGEQFRKEVHIRNLPSLFKKPKAPLDVEVDVEVVQLVENSEEGLLS
ALFEP
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggagcaggtgagctctttgtgcgagcagctggtgaaggcggtgactgtaatg
atggaccccagctcttctcagcgctaccgtttggaggctctcaagttttgtgaagagttt
aaggagaagtgcccaatttgtgtcccttgtgggctgaaattggtagagaaaacacaaact
gctattgtcagacactttggactccagatcctggaacatgttgtcaaatatcgttggaat
agcatgcctcgcatggagaaggtatacttgaagaatgtcgtcatctggctgatctccaac
ggaatccagtccattttagaagaggagagtcacatcaaggatgtccttgctcgcattgtt
gtggagatgattaagagggaatggccacaacattggcctgacatgatgacagagctggag
accctctccaagcaaggggagacacagacagagcttgtgatgttcattctactgaggctg
gcagaagatgtggtcactttccagacactgcccacacagcgcaggcgagacatccagcaa
actctggcacaaaatatggacaagatcttcaactttattctactcattcttcagcagagc
gtgaacaagtataggcgcctgaaaggtgaccctggtcaagagtctaaggtccaggctaac
tgtcgtgtggcggtggcagtgttgaacactttggctggctacattgactgggtagctatg
gtccatatcactgcagatcagtgcaagctgctggagatgttgtgccttctgcttaatgag
gtggagctacaggtggaagctgccgaatgtctgctgattgctgttagcaggaagggaaag
ctggaagacaggaagccgctgatggtcctgtttgaagatgtggccatgcattacatactc
tctgcagcacaggtggcaaatggagagggtcttgtggaaaagcattatgtgtttttgaag
agactttgtcaggtcctgtgtgctttgggcagccaactttgtgccttggtgggcttggat
tatgatgtggatgttcctgccaattttgggaagtatcttgattcctttcttgatttcaca
atacatcccagccagtttttgcgctcctccactcagatcacctggggagctctctttagg
catgaagtcctatcccaggatcctttgctgaaagccacagttccaaagtatctgcgtgcc
tgtatgaccaacctggtgaaggtaggctttccttctaaaacggacaatgccagctgtgtg
tattctcgctttgattttgacagcgatgaagacttcaatgccttcttcaactcgttccgt
gcccagcaaggggaagttgtaaggatggcgtgtcgtttggacccaaagacaggcttccag
atggctatagaatggctgaggttccaactgacagctcccgttgatgttggaactttgaac
tccaagactggagaaggtctttgttccatcttctccccttcctttgtgcagtgggatgcg
atgaccttcttttctgagagcgtcattagccagatgttccggactttgaataaagaggag
atccctgtgaatgatggcattgagctcctggagcaggtccttaactttgaaaccaaggat
ccactcattctgtcctgtgttctcaccaatgtttctgcactctttccatttgtcacctat
agacccgagtatctgccccaggtactctccaagctatttgcctcggtcacatttgaagtt
attgaggagagtaaggctcccagaactcgagctgtgaagaatgtcaggcgacatgcgtgt
tcttctatcattaagatgtgccgtgactatccgcagctggtcctgccaaactttgagatg
ctgtacaagcatgtgaagcagttgctgggtaatgaactactgctgactcagatggagaag
tgtgcactgatggaggcccttgtgctcatcagcaatcaatttaagaactatgaacgccag
cgtgctttcctagaggagctgatgactcccgtcgcctctctgtggctttcagatgaaatg
agcagaatgttgtctagccctgaagctttcatctcttatgttggtgcggataaagagatc
aatgacccagtgctggaagaccccagtggcttgaaccgttcaagaatcagcttttgcgtg
tacaccattctgggagttgtgaaacgggctcgttggcccagtgacctggaggaggctaag
gctggaggatttgtggtcggttgcacgccctgcggcaatccgatctaccgtaacccctgc
actgagcaggtgctgaaacttctcgacaacttgctcgctctcataaggactcataacaat
ttgtacatgccagagatggtgactaagctggctgagccgttctctcgagcactggatatg
ttggaagtggagaagaatgccatcttgggcctgcctcagcctcttttggagctttatgac
tctcctgtgtacaagactgtgctggaaaggatgcaaggcttcttctgcaccctctatgac
aactgtttccacatactggggaatgcggggccttctatgcagcaagatttctacaccatc
actagcctggcggatcagctgctcaactcctccttcatcagcctgaacaacatcccagac
tataggctgcgccccatgctacgtgtatttgtgaagccgctggtactctcctgtcctcca
gaatattatgaaacactagtctgcccaatcctaggtccactcatcacctacctacaactg
agactgtctcagaagtggcagattattaaccagagtagtatgttgagtgatgaagataca
gcagatgaaaacccagagtcccaggaaatgctagaagaacaacttgtccgtctgctgacc
cgggaagtcatggatcttatctcggtgtgctgtgtttctaagaagagtacagatcacagc
actaccggtgctgatggagaagatgaagaaatgatgtgtacagatgtggccccaccctct
tctgcagaaatgactgaattgggcaaatgtctaatgaaacaggaggatgtgtgtatggcc
ttgcttatcacctcatttacatctctttcctggaaagacacactatcctgtcaaagaacc
actacccacatatgctggccccttctcaagcaggtgattgcagggattctactgagtgat
gccgttacatggtttttcatcagtgttctgaaagggttacagatgcatgggcagcatgat
ggctgcatggcagctcttgttcacctagcattccacatctacgagaccctgcgccctcgc
tatccagagctgaaggcagtgatggagctgatcccagacattcagaaggaatcccttgag
cagtttgactccaagttgctgaacgcaacactgcaaaaaattgctgataaaaagaggaaa
gagcatttcaagcgtctcatctcaggctgcattgggaaaccccttggtgaacagttccgt
aaggaggtacacattcgcaatctgccatccctcttcaagaagccaaaggcaccactggat
gtggaggtggatgtggaggtggtgcagttggtggaaaacagtgaggaaggactactgtct
gctctgtttgagccatga
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