Geotrypetes seraphini (Gaboon caecilian): 117356849
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Entry
117356849 CDS
T09159
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117356849 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117356849 (HNRNPA1)
03041 Spliceosome [BR:
gsh03041
]
117356849 (HNRNPA1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117356849 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
117356849 (HNRNPA1)
Spliceosome [BR:
gsh03041
]
Common components
Common spliceosomal components
hnRNP proteins
117356849 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117356849
NCBI-ProteinID:
XP_033792518
UniProt:
A0A6P8QY11
LinkDB
All DBs
Position
3:188624658..188672031
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AA seq
384 aa
AA seq
DB search
MSESPKEPEQLRKLFIGGLSFETTDESLRGHFEQWGVLTDCVVMRDPNTKRSRGFGFVTY
STVEEVDACMNARPHRVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLR
DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALS
KQEMASASSSQRGRGGSFGGRGGSFGSNDNFGRGGSFGGRGGGGGGFSGGRGGGGGGGGG
YGSGDGYNGFSNEGGYGGSPPYSGGNRGYGGGQGGYGGNQSGGFSGTGGGYDNYNNGAGG
GGGGFAGTSSFGGSGNYNDFGNYNSQSSSNFGPMKGGGGGGGGNFGSGNRSGPYGGTGGA
SGGGGFGGSSGSGGSSSYGSGRRF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtcaccgaaagagcctgaacagctgcgtaagctcttcattggcgggttgagt
tttgagactacagacgaaagtcttcgtggccattttgaacaatggggtgtgcttacagat
tgtgtggtaatgagagatccaaacacaaaacgctcaagagggtttggatttgttacttat
tctacagtggaagaagttgatgcttgtatgaatgctaggccacacagagttgatggaaga
gtggttgaaccaaagcgagcagtttccagagaggactcccaaagacctggggcacatctg
acagttaagaaaatttttgttggaggaattaaggaagacacagaagaacatcacttgaga
gattactttgaacaatatggaaaaattgaagtgattgaaatcatgacagaccgtggtagc
gggaaaaaaagagggtttgcctttgtcacatttgatgaccatgattctgtggataaaata
gttattcagaaataccatacagtgaacggccacaactgtgaagtaagaaaagcactctca
aagcaggaaatggcaagtgcctcttctagtcaaagaggtcgtggtggttcttttggcggt
cgaggagggagttttggtagtaatgataacttcggtcgtggtggaagctttggtggccgt
ggtggtggaggaggaggattcagtggtggtcgtggtggtggtggtggtggtggtggtggt
tatggcagtggagatggctacaatggatttagcaatgaggggggatatggaggaagccca
ccatattctggcggcaacagaggttatggaggtggacaaggtggctatggagggaaccag
agtggtggtttcagtggcactggcggcggctatgacaattacaacaatggagctggcggt
ggtgggggcggctttgctggcactagtagctttggaggtagcggaaattataatgacttt
gggaactataacagtcaatcatcttctaactttggtcccatgaaaggaggaggaggagga
ggcggaggaaactttggaagtggaaatagatctgggccatatggtggcactggtggtgct
agtggaggtggtggttttggtggatcaagtggaagtggtggaagcagcagttatggaagt
ggaagaagattctaa
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