Geotrypetes seraphini (Gaboon caecilian): 117356887
Help
Entry
117356887 CDS
T09159
Symbol
TULP4
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117356887 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
Other domain-containing proteins
Tubby family proteins
117356887 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_WDR19_1st
SOCS_box
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
Beta-prop_EML
Beta-prop_LRRK2
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
117356887
NCBI-ProteinID:
XP_033792644
UniProt:
A0A6P8R1U4
LinkDB
All DBs
Position
3:complement(176034142..176213961)
Genome browser
AA seq
1559 aa
AA seq
DB search
MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRNTPQRTNFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYERRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPAAYPVPVQNTKPLLTVGFTSGDISLMNSYDDLSPVIIRSGLKDVVVQWCTQGDLLA
VAGMEKLNPLVELGSGSMLKSALIKFYNSRGEHVYTLETPVQRSIISICWGHRDSRLFLA
SGPALYVVRVEHRISSLQLLCQHTIASCLRDDREIGKLILPPRLCSYLTTAFITTIKPPI
PDPNNMRDFVSYPTAGNEGLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKMDEIYGSSLISTVIDSCNCSDSSDIELSDDWAAKKSPKLTRDSKSP
KLPRINMEARKSPKLSRAAQEISRSPRLPIRKTSIGSPSLTRREFPLEDITQQNYLAQVT
SNIWGTKFKIVGLAAFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDYINLPVFNP
NVFSEDEDDLPVTGASGVPESNPPCTVNIPIAPIHSSAQAMSPTQSMSLVQSLLATQNVQ
LDVLANQSVTGGPTNHAGDSAMQFPAPNRYANPGQVIFGGVEIGRVIQPPIPLSHQSQSA
AQMPVLDHGERDHEQLPKTKPARQVQQFTEGDAMVFSATPDIQMSKLNPPPPYPGTIPAP
PTSAPPPPPIPQPSLDLCLKKGDFSFFSVGPYQTPLGYERITTFDSSGNVEEVCRPRTQT
LRPQKKYTLQGPGSSATLRVSATEKKVQQPSTSATLNRLTIPRYSIPPGDPPPYPEIASH
LSQARGAAQRLDNSIIHATLRRNSREAALKMAQLMDNQRATLQHPPKPKTSVVAAPQYQQ
RVPTALYTCSQCSSNSNSVSSSTTPGINRSDAPAGNSSQHSSIIVHSASTSPLTSQSSYN
LLSPANNCRDRTDYINSAFTEDEALSHHSHTEKVMRQTSLTEASIGVKRPPPYQWDPMVN
EEIWIPQERTAQNSMPNPHKPPPPPQPPLMLNQSQHLDMSRVPFVSPKSSANPTATFQVN
YGVGLPYPGSYNIPSLQTVQNPCSPKEALAPTQFTQQEPTVMLQPSYPSNLSCCPLPPMY
PGSSTCSSLQLPPIALHPWNAYSACPPMQGTQVSMPPKPHLAVEKPFICPPSSELQGHMG
TEVMVETADNFQEVLSLTESPIPQRADKFVKKNRKLLDSRAEEGNVQAITEGKVKKEART
LSDFNSLISSPRLGREKKKVKNQKDQLKAKKLNKTNEFQDSSESEPELFISGDELMNQSQ
IGKKGWKTKRNMRTANELDEFRCRKANEKEDGRLGSQGFVYVMANKQPLWNEATQVYQLD
FGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgctgtggagcatgggcccgtgctctgcagcgattcaaacattttgtgcctc
tcttggaaaggcagagtccccaaaagtgaaaaagagaagccggtatgcaggaggcggtat
tatgaggaaggctggctggcaacaggaaatgggagaggagttgtaggagtaactttcacc
tccagccactgcagaagagatcgaaacaccccccaaaggaccaactttaatctccggggc
cacaacagtgaggtggtcttggtgagatggaatgaaccttttcaaaaactcgctacctgt
gatgcagatggtgggatctttgtatggattcaatatgaacgcagatggtccgtggagcta
gtgaatgatcgtggggcacaggtgagtgactttacatggagccatgatgggactcaagcc
cttatctcatacagggatggatttgtgcttgttggatcagtgagtggacagaggcattgg
tcatcagaaataaacttggaaagtcaaatcacctgtggaatatggacccctgatgatcaa
caggttctgtttggcactgctgatggtcaggtgattgtgatggactgtcatggccgaatg
ttggcacatgttctccttcatgagtcggatggaatcttgagtatgtcttggaactacccc
agctttctggtggaagacagtagtgaaagtgacacagactcagatgactattccccacca
caagatggtccagctgcatatcctgtcccagtgcagaataccaaaccactgcttacggtt
ggcttcacatcaggagacatcagtctaatgaacagctatgatgatctgtctcctgtcatc
attcgctcagggctgaaagatgttgttgtccagtggtgcactcagggagatctcctggct
gtagcaggaatggagaagctcaaccctctagtggaactgggcagtggctccatgctgaag
agtgcacttataaagttctacaacagtcgcggggagcacgtctacacactagaaacccct
gtgcagcgttccatcatatcaatttgctggggtcacagagactctcgcttgttcctggcc
tccggccctgcgctgtatgttgtcagagtggaacatcggatctccagcctgcagcttctc
tgccagcatacgatcgctagctgtttgcgggatgacagagaaattggcaagctcatcctg
cctcctcggctatgttcatacctcacaactgcttttataaccaccataaagcctcccatc
ccagaccccaacaacatgcgggattttgtcagctacccaacggcaggcaatgaaggcctg
cattgcactatgaagcgcacagaagatgatcctgaggtgggaggcccatgctatacactc
tacctagaataccttggaggactggtacctatcctgaaaggacgtcggatcagcaaactg
cgccccgaatttgtcatcatggatcccaaaacagatggaaaaatggatgagatctatggg
agtagcttgatctccacggtgattgacagctgcaactgttcagattcaagtgatatcgaa
ctgagtgatgactgggctgcaaagaaatctcctaaattaacaagagatagcaaatcaccc
aaactgcccagaattaacatggaagcaaggaaatctccaaaattgtctcgagctgcccaa
gagatatcacgatcacctcgattaccaatcaggaagacttctattggttcccccagcttg
actcgtagagaatttcccttggaagacatcactcagcagaattaccttgctcaggtcacc
tccaatatctggggaaccaaatttaagattgttggactggctgcttttcttccagctaac
cttggtgcagtgatctataaaaccagcttgctgcatctacagcctagacaaatgactatc
tatctcccagaggtgcgcaagatctctctagattacattaatttgccggtcttcaaccca
aatgtattcagtgaagatgaagatgatttacctgtaacaggagcatctggagttccagag
agcaaccccccttgtactgtgaacattcccattgctccaatccacagttcagcacaagct
atgtcacccactcagagcatgagtcttgtgcaatccttgttggccactcagaatgtgcag
ctggatgttttggctaatcagtctgtgactggagggcccacaaaccatgcaggagatagt
gccatgcagtttccagcccccaaccgatatgcaaacccaggacaagtcatatttggagga
gtagaaattgggcgtgtgatccaaccacccatacccttatcccaccagtcccaaagtgca
gcccagatgccagtgttggatcatggagaaagagatcatgagcagctgccaaagacaaaa
ccagcaaggcaggttcagcagttcacagagggtgatgccatggtatttagtgccacacca
gacatacagatgagcaagctgaacccacctcctccttaccctgggaccataccagctccc
cctacttctgctcctccaccccctccaatcccgcagccatctttggatctgtgcttgaaa
aagggagatttctcctttttttcagtaggaccttaccagactcctttgggctatgagagg
ataacaacctttgacagcagtgggaatgtggaagaggtgtgtaggccacgaacgcagaca
ctgcgcccccagaaaaaatatactttgcagggtcctggcagctctgccactctgagggtt
tctgcaacagaaaagaaagtccagcagcccagcaccagtgcgacactgaataggctcacc
attcctcgatactccataccacctggggacccaccaccttatcctgagattgccagccat
ttgtcccaggcccgaggtgctgcacagcgactggacaacagcatcattcatgccactctt
cggagaaacagtcgggaggcagcactcaaaatggctcagctgatggacaatcagagggcc
actttgcaacatccaccaaagcccaagaccagtgtggtggcagcaccacagtaccagcaa
agggtacccacagctttatacacctgcagccagtgtagcagtaacagcaacagtgtcagt
tcttctactacccctggtattaataggtcagacgcacctgcagggaacagttcacagcac
agcagtatcattgtgcactctgccagtacttcccctttaacctcccagtcctcatacaac
ctgctaagccctgccaataattgccgagaccggacagattatatcaattctgctttcaca
gaggatgaagcgctttcgcatcattctcacacagagaaggtgatgagacaaacatcactc
actgaggccagcataggtgtgaaacgtccacctccataccaatgggaccctatggtgaat
gaggagatctggattcctcaggaaaggacagctcaaaattcaatgcccaaccctcataag
ccaccaccaccaccgcaaccacctcttatgcttaatcagtcccagcatctggatatgtct
cgtgtgccatttgtttcccccaaatcatcagccaatcccactgccactttccaggtgaac
tatggcgtcgggcttccctatccagggagctacaacatcccttctcttcagacagtgcag
aacccttgctctcccaaagaagctttagctcctacacaatttacacagcaggagccaaca
gtcatgcttcagccaagctacccatccaacctctcctgttgtccattgccacccatgtat
ccaggaagtagcacctgctccagtttacagttgccacccatagccttgcacccatggaat
gcctacagcgcatgtccacctatgcagggtactcaagtctctatgcccccaaaaccacat
ttagctgtagagaaacctttcatctgtccaccttcatcagagctacaaggtcatatgggc
acagaggtgatggtggagacagcagacaattttcaggaagtcctatcattgacagagagc
cccatacctcagcgggcagataagtttgtgaagaaaaacaggaagctattggatagtcga
gcagaggaaggtaatgttcaagccatcactgagggtaaagtaaaaaaagaagcaagaacc
ctcagtgacttcaactctctaatctcaagcccaaggttgggaagggagaagaagaaagtt
aagaaccagaaggaccaactgaaggccaagaaactgaacaaaacaaatgagttccaagat
agttcagagagtgagccagagcttttcatcagtggggatgagctgatgaatcagagccag
attggtaagaaaggatggaagaccaaaagaaatatgaggacagccaatgaattggatgaa
tttcgatgccggaaagcaaatgaaaaggaagatgggcggctgggaagtcaaggatttgtg
tatgtgatggctaataagcaaccgttgtggaatgaggcaacacaagtgtatcagttggat
tttggaggtcgagtcacccaggagtcagcaaaaaatttccagattgaactggaagggcgt
caggtaatgcagtttggaaggattgatggcaatgcttacattttggactttcagtatccg
ttctctgcagtccaggcatttgccgttgctttggccaatgtaactcagcgcttgaagtga
DBGET
integrated database retrieval system
