Geotrypetes seraphini (Gaboon caecilian): 117356944
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Entry
117356944 CDS
T09159
Symbol
LAMA2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117356944 (LAMA2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117356944 (LAMA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117356944 (LAMA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
117356944
NCBI-ProteinID:
XP_033792812
UniProt:
A0A6P8PXQ9
LinkDB
All DBs
Position
3:232029504..233233733
Genome browser
AA seq
3234 aa
AA seq
DB search
MARKTFLLLLLLVLVCQGSRAQQRGLFPALLNLATNALITTNATCGENGPEMYCKLVEHV
PGLPVRNPQCRICDQSSSNPNMRHPITNAIDGKNYWWQSPSIQNGMKYHFITITLDLQQV
FQIAYIIIKAANSPRPGNWILERSLDGINFKPWQYYAITDSECLTRYNILPRTGPPSYSK
DDEVICSSYYSRIHPLENGEIHTSLINGRPSADDPSSTLLEFTSARYIRLRLQRIRTLNA
DLMMFAHNDPKEIDPIVTRRYYYSIKDISVGGMCICYGHARACPWNPRTNKSTCECEHNT
CGGSCDRCCPGFNQKPWQAGTFLTKYECEACNCHGKTTECYYDQNIADKKLSLNIHGEYI
GGGVCINCSSNTVGVNCETCVDGYFRPKGVSPEDPYPCRPCNCNLIGSFHDVCIKDNKQS
NVEGKIPGSCPCKPGFGGERCDRCALGYTGFPHCAYCNCSVMGSLNDDPCVKPCICKENV
EGENCDRCKHGFFNLNQNNQEGCEKCFCSGVSSICVGSHWNYNPVIEMSGWYVTDLEGLV
RVPPRKDTFDGPQQLNIRNSDARVVLPPVYYWSAPSSYLGNKLSAAGGQLTFTVSYDITG
QEDEVQTILHADVIIEGNGLRISTAEEGINLQPFEEQVETIVLSPELFTIHGTTYPVSKK
DFMTVLTNVKRLLIRATYSSEKEAIYRLSSVSLGVADAQSASSGKPATAVEICQCPPGFS
GTSCEKKDQAIASPNLTPANKTKSCLPWHRRVNGTLIGGICEPCRCFGHADACDDNTGAC
LNCKHRTFGPYCDRCLPGFYGNPTEGTAEDCRPCACPLNSPSNNFSPTCHLDQSRGLICD
ECPLGYTGQRCERCAEGYFGQPLVPGGSCQPCQCNNNLDISVPGSCDASTGACLKCKPGT
AGQHCEKCAEKYFGDALNARNCRPCLCNVNGSLSETCNPQSGQCECKRNVVGRQCDECKP
NCWWDSEKQVCVPCDCSPTGSISLHCDMTGRCMCKPGFFGKRCDLSRQAYERKGASRTTQ
RIQVPPRRWSFTSTSGCPRGAYKPSSLPETFGLQSSRGCVPCNCNSFGSKSFDCDESGQC
LCQPGVMGKKCDRCAHGYFRFEEGGCTPCNCPHVGNNCDPDTGRCVCPPNTIGERCDKCA
PNSWGHSIVSGCKACDCSAVGSLTSQCNPDTGCCFCRPNYSGDKCNECRLGFRNFPECIP
CRCSLAGTDVQTCDLEMETCSCAHLTGACSCKVNVEGVHCDRCKPGTYGLYVGNPLGCSS
CYCFGLTSECSEANGLIRMWLTLKPEQMILPLVDSRLQHRTTKGVIFQHPEIVANIELVR
QDLRSEPFYWKLPEQFEGRKLTAYGGKLKYAIYFEAREETGPSTYEPQVLIRGGLPTGHK
IIVRHMAAPQIGQLTRHEIEMTEHEWKYLGSVDGRSVTREDFMDVMYDIQYILIKASYGS
IMRQSRISEISMEVAEEGTVSAMSPRAYLIEKCECPLSYSGLSCEACSPGFYRSPVVTPV
RRPGPSLGTCVPCQCHGHSRFCDPDTSVCQACQHNTAGNHCERCAPGFYGIISGFPGDCR
PCSCPLSIPSNNFSPTCAMEGRNDYRCTACPPGYEGQYCERCSSGYTGNPRSPGGSCQEC
ECDPYGSLPVPCDPVTGQCSCKPGATGRNCAGCTARFAREGAKCVFCDDECTGLLLNDLD
RLNQMTMGVNLTGPLPPPYKLLLTYENVTQELKHLLSPQRTPERLLLLAQRNLDTLVPEM
DELLNRATKVNADGEQTGKDAERTYERAKSLGEFVKLTLQDAEAINEKSRRLNETLGIQD
GALEKSLQELQRDVDRMIIELRRKKLDRQGDIARDELKAAENLLQRVVKLFGEPGVKNEK
LKNDMRKKLEDHKNKLDSAHDLLKEALNKIREANYLSAINQKNMTALEAKKQAVEGGRKD
IENTLNEGFNILTKINQLVDDINTTGNDLKDINDSLEPLSKQIKTKIDDLSKELEERQLP
EKVLQAENHAAQLNESSAILDKILAEAKNLSFNATVAFRAYSNIKDSIDKAENIAKEAKA
SANEAIQLATGPQGSLKDGAKSSLQKSFRVLNEAKKLANDVKENGDNLNNMQNRLKNADE
KNKGLLKALNDTFGKLAAIPNDTAAKVQAVKDKARQANDTANDVLARIKDINQNLLGLRN
NYTKLEDDVAKANAIVKDPSQNKIIADADDTVKTLDDEASRLLDKLKPIKELQDNLAKNI
SQIKELINQARKQANSIKVSVSSGGDCIRTYRPDIKKGSYNTIILNVKTGSPDNLLFYLG
SNRYTDFLAIEMRKGKVNFLWDVGSGVGRVEYPDLNIDDQVWYRVEASRSGRNGTVSVRA
MEGPKASIVPGTYSAISLPGYNILDVDANALLFVGGLTEKLKKSDAVKTTTFSGCMGETF
LDHKPIGLWNYRDREGDCKGCTVSPQVTDSEGTVQFDGEGYALVGRPTRWNPNISTIMFK
FKTFSSSALLMYLATQDLKDFMSVELSDGRIKVSYDLGSGTASAISNKIHNDGKWKSFTL
SRVQKQANISIVDIDSNEEDSVGTTSTGSNFGLNLKADERIYFGGLPTVRNLSMKARPEV
NLKKYTGCLKDIEVSRTPYNLLSSSDYVGITKGCSLEKIHTVSFAKPGYVELPPISFDTG
TEINLSFSTRKESGIILFGTSGAPVPGRRKRRQIGQAYYAVFLIKGRLEVHLSTGLREAR
RIAIRPETGEFHDGREHSIQIERTKGIFTVQVDEDKGETQRMSGDQSISVKKLFVGGITP
DFHAPFLRNIPSFEGCIWNLVINTVPMDFAQAASFENADIGHCPTQETSRPLPEDEDKEV
TAAEVTPPAPPPSPTPAQPLDSLAIEVKSANITADFDSLTGPCVAEIAPVILKGGKQFGL
SRNSHLAIAFDDTKVKNRLTIEFEVRTEAESGLLFYMARINHADFATVQLKNGMAHFGYD
LGHGNTSTMVPQKINDGQWHQIRIFREKQRGILFVDGVSNSTTSPKKADILDVVGMLYVG
GLPINYITRRIGPVLHSIDGCIRNFKMTEAPVDLDNPTSSFNVGSCFANAQKGTYFDGTG
FAKAVDNFKVGMDILVEFSFRTTRPHGVLLGISGQRMAGMGIELVDEKLLFHADNGVGRF
SASYEPDVPGSVCDGQWHEVTAQKIKSRLELTVDGKKVEGSSSNTLSISADTNDPVFIGG
YPEGIKQFALISSTRFRGCIRDLKLTKGTGKPQEINFSKALELKGVQPLTCPAN
NT seq
9705 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaaacttttttgctccttttacttctggtgttggtatgccagggcagcaga
gcccagcagagaggcttgtttcctgcactgctgaacctggccaccaatgctctcattaca
accaacgcaacatgtggtgaaaatggccctgaaatgtattgcaagctggtggaacatgtc
ccagggctgcctgtgagaaacccccagtgtcgcatctgtgatcagagcagcagcaatcca
aacatgcgccatccaataacaaatgcgattgatgggaagaactactggtggcaaagtcca
agtatccagaatgggatgaagtatcattttatcaccatcacacttgatctccaacaggtg
ttccagattgcatatattatcattaaagctgcaaactcccctcgacctggcaactggatt
ttggagcgctcactggatggcatcaacttcaaaccctggcaatactatgctatcactgac
tctgaatgcctgacccgctacaatatcttaccacgaactggccctccatcctattccaag
gatgacgaggtcatctgcagctcatactattcaaggatccacccgctggaaaatggagag
attcacacctcactgattaatggaagacccagtgctgacgatccttcatcaacattactg
gaattcacctctgctcgctatattcgtttgaggctccagagaattcgaacactgaatgct
gatctgatgatgtttgctcataatgatcccaaagagattgacccaattgttacaagaagg
tattactattccataaaggatatttctgttggtggcatgtgtatctgctatggtcatgca
agggcctgtccatggaatccaagaacaaacaaatctacctgtgagtgtgagcataataca
tgtgggggaagctgtgatcgttgctgccctggtttcaatcaaaagccttggcaagctggg
acatttctgactaaatatgaatgtgaagcatgcaattgtcatgggaagactacagaatgt
tattatgaccagaatattgcagacaagaagctaagtttgaatatccatggagagtacatc
ggaggcggtgtgtgtattaattgttccagcaacacagtgggagtgaactgtgagacctgt
gtagatggctactttcgtccaaaaggggtttcaccagaggatccttatccatgtaggcct
tgtaattgtaatctaattggctcgttccatgatgtgtgtatcaaggataacaagcagtca
aatgtagaaggcaagatccctggttcctgtccgtgtaagcctggctttggaggagaaaga
tgtgacaggtgtgccttgggttacacaggctttcctcactgtgcctactgtaattgcagc
gtgatgggcagcttgaatgatgatccttgtgtgaagccctgtatttgcaaggagaacgtc
gaaggagaaaattgtgatcgttgtaaacatggattcttcaacttgaaccaaaacaaccag
gaaggctgtgagaagtgtttctgttcaggggtctccagcatctgtgtaggctctcactgg
aactacaacccagttatagagatgagtggctggtatgtgactgacttagaaggtcttgtc
agagttccaccccggaaggacacctttgatggcccccagcaacttaatatcagaaactca
gatgccagagtagtcctgccaccagtctactactggagtgcacccagttcttatttgggc
aacaaattgagcgcagccggaggacaactgacttttaccgtctcctatgacatcacggga
caggaggatgaagttcaaaccatactacatgctgatgttattatagagggtaatggcttg
aggataagcactgcagaagaggggattaacctacagccatttgaggaacaggttgaaaca
attgtactgagtccggaattattcactattcatggaaccacctatccagtcagcaaaaag
gatttcatgacagttctgacaaatgtgaagaggcttcttatacgggccacctacagcagt
gagaaagaagctatctacaggttaagctctgtcagccttggagtcgctgatgcacaatct
gcatccagtggaaaaccagccacagctgtcgaaatttgtcagtgtcctcccggattcagc
ggcacttcctgtgaaaagaaggatcaagctattgcttctcctaatcttacacctgccaat
aaaactaagtcttgcctgccttggcataggcgagttaatggaacccttattggtggaatc
tgtgaaccatgccgttgctttggtcatgctgatgcctgtgatgacaatactggagcttgc
ctgaactgcaagcaccgtacatttggtccatactgtgatcgatgtctccctggtttctat
ggcaatcctacagaggggaccgccgaggactgtcggccctgtgcctgcccattaaatagt
ccatcaaacaactttagcccgacatgccacctggatcaaagtcgtgggttgatatgcgac
gaatgtcctcttggctacacggggcaacgctgtgaaaggtgtgcagaaggttattttgga
caacctttggtgccaggtggctcatgccagccatgccagtgcaacaataatcttgacatc
tccgttcctggcagctgcgatgcctcaactggagcttgcctaaaatgtaaaccaggcaca
gcaggccagcattgtgagaagtgcgctgagaaatattttggggatgcactcaatgccagg
aactgccgaccatgtctgtgcaatgtgaatggctccttgtcagaaacctgcaaccctcag
tctggacaatgtgaatgcaagagaaatgttgtgggccggcagtgtgatgagtgcaagccc
aactgctggtgggactcagagaagcaggtgtgtgtgccctgtgactgcagtcccactggt
tccatttcactccactgtgacatgacggggagatgcatgtgtaagccaggattctttggg
aagcgttgtgacctcagcaggcaagcatatgagcggaaaggggcctcgaggactacacag
cgtattcaggtccctcctcgaagatggagcttcactagtacaagcgggtgccccaggggc
gcttacaagccgagctctctgcctgaaacctttggcctccagtcatccagaggctgcgtt
ccttgcaactgtaactcctttggctcgaagtcatttgactgtgatgagagcggccagtgc
ctgtgtcagcctggagtgatggggaagaaatgtgaccgctgtgctcatgggtatttccgc
tttgaagaaggaggatgcactccatgcaactgtccccatgttggcaacaactgcgaccca
gacacaggccgttgtgtttgccctcccaataccataggggaaagatgtgataaatgtgct
ccaaattcctggggccacagcattgtcagtgggtgcaaggcttgtgattgcagtgctgta
gggtcactgacctcccagtgtaatccagatactggttgctgcttttgccgcccaaactac
tctggggacaaatgcaacgagtgtaggttgggattccggaatttcccagaatgcattccc
tgtcgctgctcactggcggggaccgatgttcagacctgtgacctggaaatggagacgtgc
tcatgcgctcatctgacaggagcctgcagctgcaaggtgaacgtggaaggggttcattgc
gacaggtgcaaacctggcacgtatggcctgtacgttgggaatccacttggatgcagcagc
tgctattgctttggcctgaccagtgagtgcagcgaggcaaacgggctgatccgtatgtgg
ttaaccttgaagcctgagcagatgattctaccacttgtggactctagactccagcataga
actaccaaaggggtgatctttcagcatcctgagattgtagcaaatattgaactggtgagg
caagatctacgctcagagcctttttattggaagcttccagaacaatttgagggacgaaag
ttaacagcttatggagggaagctgaaatatgcaatttactttgaagctcgagaagagaca
ggcccatcgacctatgaacctcaggtgctcattagaggtggccttcccacaggtcataag
attatagtgcggcatatggctgctcctcaaatcggccagctgaccaggcatgaaatagag
atgacagaacatgaatggaagtatttgggttccgtggatggaaggtctgtgacccgtgaa
gacttcatggatgttatgtatgatatccaatatattcttatcaaagcttcatatggcagt
atcatgagacaaagcaggatctctgaaatctccatggaagttgctgaagaaggaacagtg
tccgccatgagtccccgtgcttacttgattgagaaatgtgaatgccccctgtcttattcc
ggcttgtcatgtgaggcttgttctcctgggttctatcgttcacctgttgtaacccctgta
aggagacccggtccgtccctgggtacctgtgttccgtgtcaatgccatggacatagcagg
ttctgtgaccctgacacctctgtctgtcaggcatgccaacacaacacagctggaaaccac
tgtgaaagatgtgcccctggattctatgggattatcagtggatttcctggtgactgccgg
ccctgttcttgccccctttccattcctagcaacaattttagccctacgtgtgccatggaa
ggaagaaatgattatcgctgtacagcttgcccacctggatatgaggggcagtattgtgaa
aggtgctcttctggctacactggtaacccgagaagtccgggaggttcttgccaggaatgt
gagtgtgatccgtatggttcactgccagtcccgtgtgatccagtcacagggcagtgcagt
tgcaaacctggagcaacgggtcggaattgtgctggttgcacggcgcggtttgcacgggag
ggtgcaaagtgtgttttttgtgatgacgaatgtacaggactccttctgaacgacctggat
cgcctaaaccagatgactatgggtgtcaatcttacaggtccacttccacctccttataaa
ttacttctcacctatgaaaatgtgacacaagaactgaagcatttattgtcacctcagcga
actccagagaggcttcttctgctggcacaaagaaatcttgatacccttgtcccagagatg
gatgagcttttgaatagggcaaccaaagtgaatgcagatggtgaacaaactggaaaggat
gctgaaagaacctatgagagggcaaaatctctgggagaatttgtcaagctcactctccaa
gatgcagaagccataaatgaaaaatccaggagactgaatgaaactctgggaatccaagat
ggagctctagagaaaagccttcaggagctgcagagagatgttgacaggatgattatagag
ctgaggcgaaagaagctagacagacaaggagacatagcccgggatgagctgaaagctgca
gaaaaccttctgcaaagagtggtaaaactatttggagaacctggtgtgaaaaatgaaaaa
ctgaagaacgacatgaggaaaaaactggaagatcataaaaacaaactggacagtgcccac
gacctattgaaagaagccctaaataaaataagagaagctaactacctttctgcaatcaat
cagaaaaacatgactgctctggaggcaaagaagcaagctgtagaaggtggcagaaaagac
attgagaataccttaaatgagggttttaacattctgaccaaaatcaaccaacttgtagat
gacatcaacactactggaaatgatctgaaggacattaatgatagcttagaaccactgtct
aagcaaattaaaactaaaatagatgatctctccaaagaattagaagaaaggcagctccca
gaaaaggtgttgcaggctgaaaatcatgcagcccaactgaatgaatcatcagccatcctg
gataagatccttgcggaagctaaaaacctctccttcaatgccacagtagctttcagagct
tacagtaacatcaaggattcaattgataaggctgaaaatattgccaaggaagccaaggct
agtgcaaatgaagccatccagctggcaacgggtccccaaggatcattaaaagatggagct
aagagctctcttcagaagagcttcagagttttgaatgaggccaagaagctggccaatgat
gttaaagaaaatggcgataacctaaacaacatgcagaacagattgaaaaatgctgatgaa
aagaataaaggtcttcttaaggctctgaatgacacttttggaaagctcgcagccattccc
aatgatacagcagcgaaggtgcaagcagtgaaagacaaagccaggcaagctaatgacacc
gccaatgatgtccttgcaaggatcaaagacattaaccagaacctcctgggtctgaggaac
aactacactaaacttgaagacgatgtggcaaaggcaaacgccattgtgaaagatccatcc
caaaacaaaatcattgcagatgctgatgacactgttaaaaccctggacgatgaagccagt
cgcttgctggataaattgaaaccaatcaaagaactccaggataacctggcgaaaaatata
tcacagataaaagagctgataaatcaagcccgaaaacaggccaactctattaaagtttct
gtgtcatcgggaggggactgtattcgcacttacaggcctgacatcaagaaaggcagctac
aatactatcattctcaatgtgaagacgggatcccctgataacctacttttctacttgggc
agcaacagatatactgacttcttagccatagagatgcgaaaaggcaaagtgaacttctta
tgggatgtgggatctggtgttggacgtgtagaatatccagatttgaacattgatgaccag
gtgtggtatcgagttgaagcctcgcggtctggaaggaatggcactgtttcagtccgagct
atggagggtcctaaagctagcattgttccaggaacctacagtgcaatctctcttccgggc
tataatatccttgatgtggacgcaaatgccctgctctttgttggtggcttgactgaaaaa
ctgaagaaatctgatgctgttaagaccaccacattctccggctgcatgggtgaaacgttc
ctggaccacaaaccgataggcttatggaattacagagacagagaaggagactgcaaagga
tgcacagtcagcccgcaggttacagacagcgagggaactgttcagtttgacggagaaggc
tatgctttggtcggtcgcccaacccgctggaatcctaatatctcaactattatgttcaag
ttcaagaccttttcttccagtgctttgctaatgtaccttgctacgcaggacctgaaagat
ttcatgagtgttgagctgagtgatggtcgaataaaagtcagctatgatctgggctcaggc
acagcttctgctatcagcaataagatccacaatgatgggaaatggaaatcgttcactcta
tctagagttcaaaagcaagccaatatctcaatagtggatatagacagtaatgaagaggac
agtgttggtacaacatccacgggcagcaactttggcctaaacttgaaagcagatgagaga
atatattttggcggcttaccaacagtgagaaacttaagtatgaaagccagacctgaagta
aatttaaagaaatatacaggatgcctaaaagatattgaagtttcacgaaccccatacaac
ttattgagcagctccgactatgtggggataaccaagggttgttcattagagaaaatacac
actgtgagttttgccaagcctgggtatgtcgagctgccaccaatttcatttgacactggc
acggagatcaacctgtccttcagcactagaaaggagtctggcatcattctttttggcacc
agcggggctccagttcctggaaggaggaagcgcaggcagattggacaggcttactatgca
gtgttcctcatcaagggtcgactagaggtgcacctgtcaacaggcttgcgagaggctcga
agaatcgccatccgacccgagacaggggagtttcatgatggtagagaacattccatccag
atagaaagaacaaaaggaatatttactgtgcaagttgatgaagacaaaggagaaacacag
aggatgtctggggaccagtcaatctctgtaaagaagctctttgtgggaggtattaccccc
gacttccatgcacctttcctgaggaacataccctccttcgagggctgcatatggaatctt
gtcattaacactgtccccatggactttgctcaggcggcatcctttgaaaatgcagacatt
ggtcattgtcccactcaggaaacttccagacccctgcctgaggatgaagacaaagaggtt
acagcagctgaagttaccccacctgctcctccaccttctcctactccagcacaacctctt
gattctcttgccatcgaagtgaagagtgccaacattacagctgacttcgattctctgacg
ggaccttgtgttgctgagatagcacctgttatattgaaaggtggcaagcagtttggtctc
tccaggaacagccatcttgcaattgcatttgatgacaccaaagtaaaaaatcgtcttact
attgagtttgaagttcgaacagaagcagagtcaggcttacttttctatatggcccggatc
aaccatgctgactttgctaccgttcagctgaagaatggaatggctcactttggatatgat
ttgggccatgggaacaccagcacaatggtcccccaaaagatcaatgatggccagtggcac
cagataaggatatttagggaaaagcaaagaggcatcttgtttgtagatggagtgtcaaac
agcaccaccagccccaagaaagccgacatcctggatgtggtgggaatgctttatgttgga
ggattgcccattaattatataactcgaagaattgggccggttcttcacagcatagatggc
tgcatcaggaattttaaaatgacagaggctcctgttgacctggataaccctacatccagc
ttcaatgttggctcctgttttgccaatgcacagaaaggaacctactttgatgggacagga
tttgccaaagcagttgacaattttaaagttgggatggatatactagtggagttttcattc
cgcacaactcggcctcatggagttttactgggaatcagcggtcagaggatggcgggcatg
ggcattgagctggtggatgagaaacttctgttccatgcagataatggagtaggcaggttt
tcagccagctatgaaccagatgtccctggcagcgtgtgtgacggacagtggcatgaggtt
acagcacagaagattaaaagccgcttggaactgacagtagatggaaagaaagtggaaggc
agcagttcaaatactctttctatctcagcagacaccaatgacccagtctttattggagga
tatcccgagggcattaagcaatttgcactgatcagtagtactcgttttagaggatgtatt
cgagacttgaagcttactaaaggcacaggcaagcctcaagaaatcaacttcagcaaagcc
ttggagctaaagggagtccaacctttaacatgtcctgcaaactaa
DBGET
integrated database retrieval system
