Geotrypetes seraphini (Gaboon caecilian): 117356949
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Entry
117356949 CDS
T09159
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117356949 (LAMA4)
04518 Integrin signaling
117356949 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117356949 (LAMA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
ConA_2nd_BAM2
MBP2C
Motif
Other DBs
NCBI-GeneID:
117356949
NCBI-ProteinID:
XP_033792839
UniProt:
A0A6P8Q927
LinkDB
All DBs
Position
3:3258542..3434299
Genome browser
AA seq
1886 aa
AA seq
DB search
MAHSPPSSCFFLLLLVLDLFCSGSALSEGSGFPLDLWPGSDNDWVTRQRHGQPQREPIPK
RCSVGYFYSTSGRCLPCNCNGNSDRCLDGSGDCVECQHNTTGQHCERCPDGYIGDVSRGV
PRFCQLCPCPLPFSSNNFAVWCSRKTGIINCLCKENYAGTKCERCAPGYYGNPLLVGSTC
RKCDCSGNSDPNLIFEDCDEVTGQCRNCLDNTTGFKCDRCAPGYHGDARVAKNCTACQCK
PCGTEACDDITGQCRCKAGVTGLFCSHCEVGYYGYDSCTGCEKCRCGPASKDGNCDPGTQ
QCRCQPGASGLSCERCQSGFWNYGPSGCQRCNCGGGPCDSRTGECVAEDPDSPAATHCTL
FTCDKCIWDLIDDLRLSSTSMEESRVSLLSVSTGVAAHRRLNAVNATTFHLLMKLAEKQS
HLEQSSHEITTAETKVSSLQREVDAMQQKGDNITTQGLQIQQRTLESQKRARDATQLVNN
VWDSIQETMDKLQYYVSLDEVTPGDVLPKLAEAEEILREMRALELTYQENLAEEEAGKAK
ELFLRVLDDWQLVQNETLAFFPLIQENFDELSAKLGDLQDALHQALAHIDETQEKTLENA
NRLQEKEIQQEILMEEVETVNETMQMAKVILTESQLITDELNEVIKNASDFYAEIDGAKQ
KLLENHVNTSQYDGELLRQATEHAQALNRQVEKLHRILKSMDTNGLVGKALNASNVYENI
AGFVEEANKTAGLALSTAYRVSDAVEGIDTQINYHRERSDQLLEEAIDLQNTFNGSDDLG
VIGTRQWLSSILLRKNSLQNHLKSATNKLSIIDQGDTGKRLEQIKQLAEETLNSTTALTN
ITEPMSQNVNSWKENLRSPVYDKSAYNRVLGAAGDTVRNLTEVVPRVLSKLHTVEMKQPA
ANISASIQRIRELIAQTRSVASKVQVSMKFEGQSAVEVNSKVDLSELKAFSSMSLYMKLP
GKEVQQEDRFIMYLGSRKAGGDYLGLAIKSDNLVYLYNLGSEDVEIPLDSKPVSSWPAYF
SLIKIERVGRHGKVLLTLPSPSSTAEEKFIKKGEAPGNDSLLDLDPDDTVFYVGGVPEDF
QLPASLNLPGFHGCLELATLNDDVISLYNFRHIYNMDTEAASPCPRNKLVFTQSRASSYF
FDGSGYGAVRNLERRGRFSQVTRFDVEVRTPVDNALVLLMVNGSKFFSLEMQDGFLRLLY
DFGFSKGPVLLEDSLKKAQINDARSHEVSVIYHNYKKMILVVDRRHVKTVENDKMSMPFT
DIYIGGAPSDVLYSVRSHLAVGLNFKGCMKSFQFQKKDFNLLEEPGSLGLSYGCLEESLM
SRRAFFNGGSYIASSQKLSLSDAFEVGFSFRSLAASGLLLYHAEKPEDFTIVLEEGAVVL
FVMGTRVRSTGQHYNDGDNHFIVTHISPTRYELLVDEEDKNSEIRAKPMPTSTTAMKFYF
GGSPAGLSYANFTGCLSNAYFTRMDRDVDVEDFQRYVEKVNISLDDCPTESLPLNLLDKH
SQKSFKAKRRLNEGEVKWRNDPTCYFSSQLEAVENAHQYGGIGSSRQEFYHIPENFTERA
QLSLSLRTHSSSGMIFYVSDKEEQNFLTLFLAQGKLNFMFNMGPKKLKIRSQEKYTDGLW
HSVVFTRGRNVGRLIIDGLRVQEKIVPTSTFPWHVHGPLSLGGVAPGKASKHIQDSSIRS
FTGCLSNFQINGQTVSVASQTFGVTPCFEGPTEAGTYFSAEGGYVVLDESVTLGHKLELE
VRPRSRSGFLVHAHSLSGEYLSLYMKEGQVVVQINNSNRNLSTSVTPKQRLCDGQWHRIT
VIRDSNMVELMVDSEVSHTLGPAYTVNLTEPLFVGNVPESLLSTRFTAHDIYTGCIRNLK
TDHRIVSFSKAALVSGAVSISSCPAA
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggctcacagcccgcccagctcctgcttcttcctcttgctcttggtcttggacttgttc
tgctcaggcagtgctttgagcgaaggcagtgggttccctctggacctctggcctggcagc
gacaatgattgggtgacaagacagcgacacggacagccgcagcgagagcccatccctaag
agatgcagtgtgggctatttttattccacatctggcagatgtttgccctgtaattgcaat
ggaaattcagacaggtgcttggacggttccggagactgtgtggagtgccagcacaacaca
acaggacaacactgtgaaaggtgcccagatggttacattggcgacgtcagcagaggagtg
ccccggttctgccagctctgcccctgccctctgcccttcagctccaacaattttgccgtc
tggtgcagcaggaaaactggcattataaactgtctgtgcaaagagaactatgcaggaacc
aagtgtgaaaggtgtgctcccggttattatggaaaccccttactggtaggcagcacctgc
aggaagtgtgactgcagtggaaactcagaccctaacctgatctttgaggactgtgacgag
gtgactggacagtgccgcaactgcctggacaataccactggcttcaaatgtgaccgctgc
gcaccaggctaccacggtgatgccagagttgccaaaaactgcactgcatgtcaatgcaag
ccatgtgggactgaggcatgtgatgatatcactgggcagtgccgttgcaaagctggagtt
actggacttttctgcagccactgtgaggttggctattacggatatgactcctgcaccggc
tgtgaaaagtgtagatgtggtccagcttccaaagacgggaactgtgaccctggaacccag
cagtgtcggtgccagccaggggcaagcgggctgagctgtgagcgctgccagtctggcttc
tggaattatggaccttccggctgccagagatgtaattgcggaggaggaccttgtgacagt
cgtactggagaatgtgtagcggaagaccccgattccccagcagctacacactgcaccttg
ttcacttgtgataaatgcatttgggatctgatagatgacctcaggttatcgagtacatca
atggaggaatcacgagtctctctactgagtgtttccactggagttgctgcccacagacgc
ctgaacgcagtgaatgccaccaccttccaccttctgatgaaacttgcagagaaacagtct
cacctggaacagagcagtcatgagattacaacagcagagaccaaagtgagcagcttacag
agagaagtggacgccatgcagcaaaagggagacaacataaccactcaaggtttgcaaatc
cagcaacgaaccctagaaagccagaagcgagccagggatgccacacaactggtcaacaat
gtgtgggacagcatccaagagaccatggacaagttacagtactatgtgagcttagacgag
gtgacccccggggatgttctgcccaagttggctgaagctgaagagattcttagagaaatg
agagctcttgagctcacttatcaggagaaccttgcagaggaagaggctggaaaagccaaa
gagttgttccttcgtgtgctggatgattggcagctggtgcagaacgagactctggctttc
ttcccgctgattcaggagaactttgatgagctcagtgctaagctgggggatctgcaggat
gctctgcaccaggcactggctcacattgatgaaacgcaagagaagactctggaaaacgca
aacagactgcaggagaaagagattcaacaagaaattttgatggaagaagtagaaactgtt
aatgagaccatgcaaatggcgaaagtcatattgacggagtcgcagctgatcaccgatgaa
ctaaatgaagttataaagaatgcatccgacttttatgcagaaattgatggggcaaagcag
aagttgctggagaaccacgtgaacacgtcgcagtatgatggggaactgctccgacaagct
acagagcatgcacaggcgctgaacagacaagtggagaagctgcacagaatcctgaagagt
atggacacaaatggcctggttggcaaggcgttaaatgcgtccaacgtgtacgaaaatatc
gcaggctttgtggaggaggcaaacaagacagcaggattggccctgagcaccgcatacaga
gttagcgatgctgtagaaggaatcgacactcaaattaattatcacagagaaagaagtgac
cagctccttgaagaagccatagatctccaaaacaccttcaatggcagtgatgatctgggt
gtcattgggaccagacagtggctctcctcgatacttctcaggaagaattctctccagaat
cacctgaagagcgccaccaacaagctgagcataattgaccaaggtgacacaggaaagcgt
ttggagcagatcaagcaattggctgaggaaaccctgaacagcaccacagcgctgacaaac
atcacagagcccatgtcccagaatgtgaacagctggaaagagaatctaaggagtcctgta
tacgacaaatctgcttacaatcgtgtacttggcgcagctggagatacagtgaggaactta
acagaggttgttcctcgggtcctgagtaagcttcacaccgttgagatgaaacagccagca
gccaacatctcagccagcattcaacggatccgagagctgattgcacagaccagaagcgtg
gctagcaaggttcaagtttccatgaagtttgaaggtcagtcagcagttgaggtcaattcc
aaggttgatctttctgagctgaaggccttttcctccatgagcctctatatgaagctgccg
gggaaagaggtgcagcaggaggaccggtttatcatgtacctgggcagcaggaaagctgga
ggagattatttggggctagccattaagtctgacaatctggtttatctctataacctgggt
agtgaggatgtggagatccctctggactcaaagcctgtcagttcctggcctgcatatttc
agcctcatcaagattgaaagggtaggacggcatgggaaagtgctcctgacgctgccaagt
cccagcagtacggccgaagagaagttcatcaaaaaaggggaggcaccaggtaatgactcc
ctgctggacctggaccctgatgacaccgtcttctatgtggggggagttccagaagacttt
cagttgccggccagcctgaatctgcccggattccacggctgcctggaactagccaccctg
aatgacgatgtcataagtctctataacttcaggcacatctataatatggacacagaagca
gcatctccgtgtcccaggaacaagctggtgttcacacagagccgggcctcaagttacttt
tttgatggatccggatatggggctgtgaggaacctggagagaagagggcgcttcagccag
gtcacgcgctttgacgtggaggttcgaacccctgtagacaatgccttggtgctactgatg
gtgaatgggagtaagttcttcagtctggagatgcaggacggcttcctgcgcctgctctat
gactttggttttagtaaaggcccggtgcttctggaggattctctgaagaaggctcagatc
aacgatgcaagatctcatgaggtgtctgttatctaccacaactataagaagatgatcttg
gtggttgacagacgacacgtgaaaaccgttgagaatgacaagatgtctatgcccttcacg
gatatctatattgggggggcaccttccgatgtcttgtacagtgtccgctctcacttggct
gtgggtctcaactttaaaggctgtatgaagagtttccagttccagaagaaggattttaac
ctgctggaagagcctggaagcctggggctcagttatggctgcctggaggagtctctgatg
tctcgaagagccttcttcaatggagggagctacatagcttctagccagaaactctcactc
tccgatgcctttgaggtcggtttcagcttcaggagcctggctgccagtgggctactcttg
taccatgctgagaagcctgaagacttcaccattgtcttggaagagggtgccgtcgtcctc
tttgtgatgggcaccagagttcggtctacaggccagcactacaatgatggagacaatcat
ttcatcgtcactcacatctcaccgacacgatatgagctgcttgtggacgaggaggataag
aacagtgaaatcagggcaaaaccgatgcctacatctacgactgccatgaagttttacttt
ggtggctcacccgccggcctttcctacgctaacttcaccggatgcctcagtaatgcgtat
ttcaccaggatggacagagatgtggatgtggaagattttcagcgctatgtagagaaggtt
aacatttcgctcgatgactgccccacggagtctctaccacttaatctccttgacaaacat
agccagaaatcttttaaagcaaaaagacgccttaatgaaggggaagtgaaatggcgcaat
gaccccacctgctatttctccagccagctcgaggctgtggagaatgctcaccagtatgga
gggataggcagtagccgccaggaattctaccatattccagagaacttcactgagagggca
cagctttctctcagcctgagaacgcattcttccagcgggatgatcttctatgtctccgac
aaggaagagcagaacttcctgaccctctttctagctcaagggaagctgaatttcatgttt
aatatgggccccaagaagctgaaaatcagaagtcaggagaagtacacggatgggctatgg
catagtgtggtatttacacgaggaaggaacgtggggcgcctgataattgatggtctaaga
gtgcaggagaagatcgtccccacctccacctttccttggcacgtccatgggcccctttct
ttaggaggtgtggctccaggaaaagcctcgaagcacatccaggattcctccatacgcagc
ttcactggctgcctaagcaacttccagattaatgggcagactgtttccgtagcatctcag
accttcggcgtcaccccttgttttgaaggccctaccgaggcgggaacatacttttcagca
gagggaggatatgtggttctggatgaatctgttactctgggtcacaagttggaattggaa
gttcgcccccgcagcagatcagggttcttggtgcatgcgcatagcttgagtggcgagtac
ctgagtttgtacatgaaggaaggacaggttgtcgtccagataaataattccaataggaat
ctctcaacctctgtcacaccaaagcaaagactgtgtgatgggcagtggcaccgaattaca
gtgatcagggactccaacatggtggagctgatggtggattcagaggtgagccacacgcta
ggtccagcatacaccgtgaacctgacagagcctctatttgttggcaatgtgccagagtcg
ctgttgtcaaccagattcacagcacacgacatctacactggctgtattcgcaacttaaag
actgaccataggattgtgagtttcagcaaggcagcactagtgagtggagcagtaagcatc
tcttcttgccctgcagcctaa
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