Geotrypetes seraphini (Gaboon caecilian): 117357038
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Entry
117357038 CDS
T09159
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gsh03012
]
117357038 (DHX57)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117357038 (DHX57)
Translation factors [BR:
gsh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117357038 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
zf-CCCH_4
HA2_N
RWD
Torus
zf_CCCH_4
zf-CCCH
nSTAND3
zf-CCCH_2
AAA_22
AAA_19
ResIII
AAA_14
Viral_helicase1
T2SSE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
117357038
NCBI-ProteinID:
XP_033793056
UniProt:
A0A6P8R313
LinkDB
All DBs
Position
3:369590791..369716276
Genome browser
AA seq
1384 aa
AA seq
DB search
MNDPGRRKGKPNKGDGKRGRGGRGGGRGRPTKPRGGGGGGGGGGGGGSRKGSNKTWDDGD
DIYFSNKPQTSFRSNFGSKQDRRPRRIRQTSMPLQTIHMTSENQERVKELLRELHGQEVE
AATEEAGSEGDEEYDELDYRCDEEHYWSTHADVSEVMENASSESPECVMPEAEISPFAVG
KLSRYGFDKERCLTVLKICDGDVGTSLECLLQQCFSETHKKKIRALEASANVSLEECMER
RQEEAFVLSSICGDKFIERIPNRVWTIGLELEYLTNKLRKFQKKDSAKEQTKEISRDICR
FFLQGSCRYGSRCKFRHDVPKATQNLKDDSHLRVSEDGCCLYELEIRFPEGNKYPCQAPL
IAFHSIDENLPLACRLNIAEFLYGKALIAAEICEPVVYSLLACLEDEDEILKLLGNTHHK
YSVPVPQLISTASVSRSGTATYKPSVSEKTFSPTLPAEVQKKLKPEEEFENYVGNNIESE
AVTKENESYASFKKNLSRKYSWQPKAFCIENTKICKNFQSKQSSRRYQAMLEERQKLPAW
QARESILDLLRQHQVIVVSGMTGCGKTTQIPQFILDASLKGPSSQVSNIICTQPRRISAI
SVAERVAQERTEKVGLTVGYQIRLESMKSSATRLLYCTTGVLLRRLEGDTCLQGVTHIIV
DEVHERTEESDFLLLVLKNVIIQRPDLCVVLMSATLNAELFSHYFNTAPVVNIPGQTFPV
DQFFLEDAIALTGYVIEDGSPYARSAKQCMREAAGGSARGRSYQDMLEDLGEEMRSSLHF
QDSRDAKDSIPDQQLNFKQLMARYKECNKSVIKTMSVMDMDKINLELIEALLEWIVNGDH
SYPQGAILVFLPGMAEIKMLYEQLQSNAFFSNRGNKRCIIYPLHSSLSSEEQQAVFQKAP
NGITKIIISTNIAETSVTIDDIVYVIDSGKMREKRYDPRKEMESLEDTWVSRANALQRKG
RAGRVASGVCFHLFTSHHYQMQLVEQQLPEIKRVPLEQLCLRIKMIEMFAEKSLEWILLQ
LIEPPRADSLQASKLRLHDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGAIFRCLDP
ALTIAASLAFKSPFVCPWEKREEANNKKLEFAIANSDHLAILQAYKEWSLAAKKGSRASY
SYCRENFLSGRVLQEIASLKRQFTELLSDIGFVKERLRAKDIEKRWSYGGDGVLNATGEE
ANLNAENIKLISSILCAALYPNVVQVKVPEENYHQTSTGAIKMLPKAEELRFVTKNDGYI
HIHPSSVNFQVRHFESPYLVYHEKVKTSRVFVRDCSMVSVYPLVLFSGGQVNIELRSGEF
VISLDNGWIRFAAASYQVAELVKELRCELDQLLQDKIKNPMMDLCTCPRGSRIIAMIVKL
VSTQ
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatccagggagaagaaaaggaaaaccaaacaagggagatgggaaaagaggcaga
ggaggtagaggaggaggaagaggacgaccaactaaacctcgaggaggaggaggaggagga
ggaggtggaggtggaggtggaagtagaaaaggttcaaacaagacttgggatgatggagat
gacatttacttctctaacaaaccacaaacttcattcagatccaactttggtagcaaacaa
gacagacgacccaggcgtatccgtcagactagtatgcctctgcagactatacacatgact
tcagagaatcaggaaagagtgaaagaacttctcagagaactccatggacaagaggttgag
gctgcaacagaagaggctggatcagaaggagatgaggaatatgatgaactagattaccgt
tgtgatgaggagcattactggtctactcatgcagatgtttcagaagtaatggaaaatgca
tcatcggagtctccagagtgtgtcatgccagaagctgaaatttctccatttgctgtaggg
aaattgtccaggtatggctttgataaggaacgctgcctaactgttctgaagatatgtgat
ggtgatgttggaacatctttggaatgtttactgcagcagtgcttttcagaaacgcacaag
aaaaagataagagcattggaggcttctgcaaatgtcagtttggaagagtgcatggaacgc
aggcaagaagaagcttttgtacttagttcaatttgtggagacaaattcattgaaagaatt
ccaaacagagtttggaccattggcttggagcttgaatatctaacaaataaactgaggaag
ttccaaaagaaggatagtgccaaagaacagaccaaagagatctcaagggatatctgcaga
ttttttcttcaagggagctgtaggtatggctcaagatgtaaatttaggcatgacgttcca
aaagcaacacagaacctgaaagatgattctcaccttcgagttagtgaagatggatgttgt
ttgtatgaacttgaaattcgattcccagagggtaacaagtacccatgccaagcaccactt
attgcatttcactctattgatgagaacctgcctcttgcttgccgtctgaacattgctgag
tttctctatggaaaggctttgattgcagcagagatatgtgaacctgttgtctattcttta
ttagcctgcttggaggatgaagatgaaatacttaagttacttggtaatactcaccacaag
tatagtgttcctgttccacagctgatctcaacagcttcagtttccagatcagggacagca
acttataaaccatcagtttctgaaaaaacgtttagtccaactctaccagcagaagtccag
aagaagttaaagcctgaagaagagtttgaaaattatgttgggaataatatagagtctgaa
gctgtcacgaaagagaatgaaagctatgctagcttcaagaagaatctttcaagaaagtac
agttggcagccaaaagctttctgcatagagaataccaaaatctgcaagaattttcagtct
aagcagtcttccagaagataccaggcaatgctggaagagcgtcagaagctgcctgcatgg
caggcaagagaatccattctggacctactgagacaacaccaggtgattgttgtgagcggt
atgacaggctgtggcaagacaacccagatcccccagtttatcttggatgcttcactgaaa
ggtccttccagccaagtgtctaacatcatctgtacacagccccgcaggatctctgccatt
tctgtggctgagcgggtggctcaagagcgaacagaaaaggtggggctgacagtgggatac
cagatcaggcttgaaagcatgaagtcatctgctaccaggctgctttactgcactacaggt
gtcttgctacgaaggctggaaggagacacatgcctgcaaggagtaactcatattattgtt
gatgaagttcatgagagaacagaagaaagtgacttcttgttgctagttttgaagaatgta
ataatccagagaccagatctctgtgtagtacttatgagtgccaccctgaatgcagagctt
ttctcccattattttaacaccgctccagtagtaaatataccaggacagacgtttcctgtt
gatcagttcttcctggaagatgcaattgcacttactgggtatgtaattgaagatgggagc
ccatatgcacgctctgcaaagcaatgtatgcgggaagccgcaggagggtcagcaagaggc
aggagctatcaggacatgctggaagacttaggggaagagatgagatcttctctacatttc
caggacagtagggatgccaaggattccattccagatcagcagttaaatttcaaacagctc
atggcacggtataaagaatgtaacaagtctgtgataaaaacaatgagtgtgatggacatg
gacaagattaacctggaattgatagaggctttactggaatggatagttaatggggatcac
tcctacccacaaggtgctatattggtctttctgccaggaatggcagaaatcaaaatgctg
tatgagcagctgcagtcaaatgccttcttcagcaacagaggtaataagcggtgtatcatt
tatccactccactcctcgctgtctagtgaagaacagcaggctgtattccagaaagctcct
aatggaatcacaaagatcattatttctaccaacattgccgagacctctgttaccattgat
gacattgtctatgtgattgattctggaaaaatgagagaaaagaggtatgacccaagaaaa
gaaatggagagcttggaggatacctgggtctcccgggctaatgctctccagaggaaagga
cgagcagggcgtgtagcctcaggtgtgtgtttccatcttttcaccagtcatcattaccag
atgcaactggtagaacagcagctacctgaaataaagagagtacccttggaacagctgtgt
ctgaggattaagatgatagagatgtttgctgagaaaagtcttgaatggattttgttgcaa
ctaattgagcctccgagagcagattctctacaggcttccaagcttcgcctacatgacctg
ggggccttgacaccagatgaaaagctgactccgttgggttaccatttggcctctctgcct
gttgatgttagaattggcaaactaatgctctttggagccattttccgctgcctggatcct
gctctgactattgcagctagtctggccttcaagtccccatttgtatgtccatgggagaaa
agagaagaagcaaacaacaagaaactagaatttgcaattgcaaacagtgatcatttggct
attcttcaggcttacaaggaatggagccttgcagcaaagaaaggatcacgtgctagttac
agctactgcagagaaaacttcttatcagggagagttctacaagaaattgctagcttgaag
agacaatttacagaactactttcagatattgggtttgtaaaggaaaggttaagagccaaa
gatattgaaaagagatggtcatatggaggagatggtgtcctaaatgcaacaggagaagag
gcaaacttgaatgcagagaacatcaaattaatctcctcaatactatgtgctgctttgtat
cccaatgtggtccaggtgaaagtcccagaagaaaattatcaccaaaccagtacaggagca
ataaaaatgttaccaaaggccgaagagctgaggtttgtcaccaagaatgatggctacata
catattcatccttcctctgtgaactttcaggtcagacactttgagagcccatacttagtg
tatcatgaaaaagtaaagactagtcgtgtgtttgtacgggactgcagcatggtgtcagtc
taccccctggtgttgtttagcggaggacaggtgaatattgagctacgtagtggggagttt
gtcatttcactggacaatggatggatccgatttgcagcagcttcttatcaggtagcagag
ctggtgaaagaacttcgatgtgaacttgatcagctattacaagataaaattaagaaccca
atgatggatctgtgcacatgccctcgagggtctcgtattattgccatgattgtcaagctc
gtaagcacccagtaa
DBGET
integrated database retrieval system
