Geotrypetes seraphini (Gaboon caecilian): 117357072
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Entry
117357072 CDS
T09159
Symbol
SMC6
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117357072 (SMC6)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117357072 (SMC6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
ACBP4_C
AAA_29
AAA_21
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-GeneID:
117357072
NCBI-ProteinID:
XP_033793150
UniProt:
A0A6P8QBJ6
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Position
3:complement(99965994..100261134)
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AA seq
1102 aa
AA seq
DB search
MGKRKDESPTAAAVEHKRARQMAEELENDAAEGRHSQAYSDINSNSQNSQANTAEVGIIE
SISLKNFMCHAMLGPFQFGPNVNFVVGNNGSGKSAVLTALIVGLGGKATATNRGSSLKGF
VKYGQSSADVSITLRNRGEDAFKPEVYGDSIIVQQHITQEGARTYKLKSKTGQSVSSKKE
ELIAILDHFNIQVDNPVSVLTQEMSKHFLHSKNEGDKYKFFMKATQLEQMKEDYSYIMET
KARTHDQIKQGIERLEELKQQCLEKERRFQSIACLTEMKDQLENLKHQMAWAVVNELEKQ
LSPIRDQLNVEESRTVKFDQKVDEWQGRVNEAEEKFKEIQDRLEKVNEEARALKPQCISL
KSDMLATKREYNEAEVFCNRHRTELKRLERDDQQLRMRIEELRKSVDHVSETEKQERLNK
IAELKEQLKMLLDKVRTTVEQTEQFQQAIYKYKEEHSRLKIEERDVQSTLENHKKHLRGL
KESKTDRLKRFGEQMPNFLHAINTAFREGRFKKKPIGPLGACIRLKDAQLALAVECCFKS
LLHAFCCDNHQDERVLQFLMSKFFPPMKRPQIIVSEYRDQVYDVRRRAVFHPTYPSVLNA
LEIEDPVVTNSLIDTRGIETVLLIKNNQEARRVMQEQRPPQNCREAFTGEGDQVFVNRYY
SSDSNSPKYLSWDVEAEISVLEKEIENKTAQLSTFEQRLLSIESDTRQNEEHYRQYQQRS
KQIQTKIQSIRMNITDLENVEEQQPVDISTLEDEAQENKNKMESVKNDLSKARDKMDKWK
SLVMKTEQKYDEIKIKISKVTEEADPVKDELNKLDRDFDNCKRHKNHYEEKQREHLEKIK
TKKEELTTKEREVEEKIGKARQIYPERIEVKRTARSLDTEINRLREKINSEQDRHGNREE
IIRQYHEAKETYQDIESKVKNLKKFIKLLDEIMTQRYKTYQQFRRYLTVRCKVYFDSLLA
QRAYSGKINFDHKNETLSITVQPGEGNKAALNDMRSLSGGERSFSTVCFVLSLWSIAESP
FRCLDEFDVYMDMVNRRISMDMMLKMADSQRFRQFILLTPQNMSSLPSSSLIRILRMQDP
ERGQTTLPFLPQSRDEENENSS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaggaaggatgagagtcccactgcagcagctgtggagcacaaacgagcaaga
cagatggctgaggagctggagaatgatgctgcagaagggagacattcacaggcttattct
gacatcaactctaattcccaaaattctcaagcaaatacagctgaagttgggattattgaa
agcatttctctgaaaaacttcatgtgccacgctatgcttgggccctttcagtttggacca
aatgtgaactttgtggttgggaacaatggaagtgggaaaagtgcagtattaacagctctt
attgtgggccttggtgggaaggctactgcaacaaatcgtggttcttctttgaaaggattt
gtgaagtatggtcagtcctctgcagatgtttctattacattacgaaaccgaggtgaagat
gcatttaaacccgaggtttatggtgattctattattgtacagcagcatattactcaggag
ggtgctcgtacttacaaactgaaaagcaaaacgggtcagtcagtttcttcaaaaaaagaa
gagcttattgcaattcttgatcatttcaatatacaggtggataatccagtttctgtttta
acccaagagatgagtaagcactttttgcactctaaaaatgaaggtgataaatataagttt
tttatgaaagcaacacagcttgaacagatgaaagaagattattcctatattatggaaacc
aaagcaaggacacatgatcagataaagcaaggtatagagcgtcttgaagaactgaagcag
caatgtttggaaaaagagagacgcttccaaagcattgcatgtttaactgaaatgaaagat
caactagaaaaccttaaacatcaaatggcttgggcagtggttaatgagcttgagaaacag
cttagcccaatcagagaccagcttaatgttgaggaaagccgtactgtgaagtttgatcaa
aaagtagatgaatggcagggtagggtaaatgaagcagaagaaaagttcaaagaaattcaa
gatagattggagaaggtaaatgaggaagcacgagccctgaaaccccagtgcatttctttg
aaatcagatatgctggcaacaaaaagagaatacaatgaagctgaggtcttttgtaaccga
caccgaactgaattaaaacgactagaacgagatgatcagcagcttcgcatgcgaattgag
gaactgagaaaaagtgttgatcatgtttctgaaacagaaaagcaggaaaggctaaataaa
attgccgagctgaaggagcagttgaaaatgctgcttgacaaagtgagaactactgttgag
caaactgagcagtttcagcaagcaatatataagtataaggaggaacacagcaggcttaag
atagaggaacgtgatgtacagtctacactggaaaaccataaaaaacacctaagaggactg
aaggagagtaagacagacaggctaaaaagatttggagagcagatgcctaattttcttcat
gcaattaatacagctttcagagaaggacgttttaaaaaaaaaccaattggtcctttagga
gcctgtattcgtctgaaagatgcacaacttgctttggctgtggaatgttgttttaaaagt
ctacttcatgctttttgttgtgataaccatcaagacgaaagagtgcttcagtttctgatg
tccaagttttttccacccatgaaaagaccccagattattgtcagtgaatatcgagatcaa
gtctatgatgtacggcgtagagcagtgtttcatccaacgtacccatctgttcttaatgct
ttagaaatagaagaccctgtggttacaaattctttaattgacacgagaggaattgagacg
gtcctgcttattaaaaacaatcaagaagctcgcagagtcatgcaggaacaaagacccccc
caaaattgcagggaagcctttacaggtgaaggagatcaggtgtttgtaaaccgttattat
tcatctgacagtaacagtcccaaatatctcagttgggatgtggaagcagaaataagcgtc
ttggagaaagaaattgaaaacaagacagcacaattgtctacatttgagcagcgtttgctt
tctatcgaaagtgataccagacaaaatgaggaacactacagacagtatcagcagagaagc
aagcaaatacagacaaaaatacagagtatacgtatgaatataacagaccttgagaatgta
gaagaacaacagccagtggatatctctacattggaagatgaagctcaagagaataaaaac
aagatggagtccgttaagaatgacttatcaaaggccagagataaaatggataaatggaaa
agtttggtaatgaagactgaacaaaagtatgatgaaattaaaattaaaatcagtaaggtg
actgaggaagcagatccagtaaaggatgagctgaacaaattggacagggactttgacaac
tgtaaacgccataaaaatcattatgaagagaagcagagggagcacttggagaaaataaaa
acaaaaaaggaggaattaactactaaggaaagggaggtggaggaaaaaattggaaaggcc
aggcaaatctatccagaacgaatagaagtcaagagaactgctaggagtcttgacacagaa
attaatagattacgggaaaaaattaattcagaacaggatcgtcatggaaaccgtgaagaa
attataaggcaatatcatgaagcaaaggaaacttatcaggatatagagagtaaagtaaag
aatctcaaaaagttcattaagttgctggatgaaataatgacccaaagatacaagacatat
cagcagttcagaaggtaccttactgtacgctgcaaggtctactttgatagtttattagct
caacgagcttattctggaaaaataaactttgaccacaagaatgaaacactttctataaca
gtccagcctggagagggaaacaaggctgctctgaacgatatgaggtccttatctggaggt
gaacgctctttctcaactgtttgtttcgtcctttccctgtggtccatcgctgaatctcct
ttcagatgtctggatgagtttgatgtttacatggatatggttaatagaagaatttcaatg
gatatgatgcttaagatggctgactctcagagattcagacaatttattttgcttacccca
caaaacatgagctccctgccttcaagtagccttatccgaatccttcgaatgcaagaccct
gagcgaggacaaacaacactgccttttctacctcaaagtcgagatgaagaaaatgaaaat
tcatcttga
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