Geotrypetes seraphini (Gaboon caecilian): 117357257
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Entry
117357257 CDS
T09159
Name
(RefSeq) laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04510
Focal adhesion
gsh04512
ECM-receptor interaction
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117357257
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117357257
09142 Cell motility
04820 Cytoskeleton in muscle cells
117357257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_I
Laminin_II
Laminin_B
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
117357257
NCBI-ProteinID:
XP_033793521
UniProt:
A0A6P8R4D9
LinkDB
All DBs
Position
3:233252242..233719076
Genome browser
AA seq
2269 aa
AA seq
DB search
MRRRACLCNVNGSLSETCNPQSGQCECKRNVVGRQCDECKPNCWWDSEKQVCVPCDCSPT
GSISLHCDMTGRCMCKPGFFGKRCDLSRQAYERKGASRTTQRIQVPPRRWSFTSTSGCPR
GAYKPSSLPETFGLQSSRGCVPCNCNSFGSKSFDCDESGQCLCQPGVMGKKCDRCAHGYF
RFEEGGCTPCNCPHVGNNCDPDTGRCVCPPNTIGERCDKCAPNSWGHSIVSGCKACDCSA
VGSLTSQCNPDTGCCFCRPNYSGDKCNECRLGFRNFPECIPCRCSLAGTDVQTCDLEMET
CSCAHLTGACSCKVNVEGVHCDRCKPGTYGLYVGNPLGCSSCYCFGLTSECSEANGLIRM
WLTLKPEQMILPLVDSRLQHRTTKGVIFQHPEIVANIELVRQDLRSEPFYWKLPEQFEGR
KLTAYGGKLKYAIYFEAREETGPSTYEPQVLIRGGLPTGHKIIVRHMAAPQIGQLTRHEI
EMTEHEWKYLGSVDGRSVTREDFMDVMYDIQYILIKASYGSIMRQSRISEISMEVAEEGT
VSAMSPRAYLIEKCECPLSYSGLSCEACSPGFYRSPVVTPVRRPGPSLGTCVPCQCHGHS
RFCDPDTSVCQACQHNTAGNHCERCAPGFYGIISGSPGDCRPCSCPLSIPSNNFSPTCAM
EGRNDYRCTACPPGYEGQYCERCSSGYTGNPRSPGGSCQEFCDDECTGLLLNDLDRLNQM
TMGVNLTGPLPPPYKLLLTYENVTQELKHLLSPQRTPERLLLLAQRNLDTLVPEMDELLN
RATKVNADGEQTGKDAERTYERAKSLGEFVKLTLQDAEAINEKSRRLNETLGIQDGALEK
SLQELQRDVDRMIIELRRKKLDRQGDIARDELKAAENLLQRVVKLFGEPGVKNEKLKNDM
RKKLEDHKNKLDSAHDLLKEALNKIREANYLSAINQKNMTALEAKKQAVEGGRKDIENTL
NEGFNILTKINQLVDDINTTGNDLKDINDSLEPLSKQIKTKIDDLSKELEERQLPEKVLQ
AENHAAQLNESSAILDKILAEAKNLSFNATVAFRAYSNIKDSIDKAENIAKEAKASANEA
IQLATGPQGSLKDGAKSSLQKSFRVLNEAKKLANDVKENGDNLNNMQNRLKNADEKNKGL
LKALNDTFGKLAAIPNDTAAKVQAVKDKARQANDTANDVLARIKDINQNLLGLRNNYTKL
EDDVAKANAIVKDPSQNKIIADADDTVKTLDDEASRLLDKLKPIKELQDNLAKNISQIKE
LINQARKQANSIKVSVSSGGDCIRTYRPDIKKGSYNTIILNVKTGSPDNLLFYLGSNRYT
DFLAIEMRKGKVNFLWDVGSGVGRVEYPDLNIDDQVWYRVEASRSGRNGTISVRAMEGPK
ASIVPGTYSAISLPGYNILDVDANALLFVGGLTEKLKKSDAVKTTTFSGCMGETFLDHKP
IGLWNYRDREGDCKGCTVSPQVTDSEGTVQFDGEGYALVGRPTRWNPNISTIMFKFKTFS
SSALLMYLATQDLKDFMSVELSDGRIKVSYDLGSGTASAISNKIHNDGKWKSFTLSRVQK
QANISIVDIDSNEEDSVGTTSTGSNFGLNLKADERIYFGGLPTVRNLSMKARPEVNLKKY
TGCLKDIEVSRTPYNLLSSSDYVGITKGCSLEKIHTVSFAKPGYLELPPISFDTGTEINL
SFSTRKESGIILFGTSGAPVPGRRKRRQIGQAYYAVFLIKGRLEVHLSTGLREARRIAIR
PETGEFHDGREHSIQIERTKGIFTVQVDEDKGETQRMSGDQSISVKKLFVGGITPDFHAP
FLRNIPSFEGCIWNLVINTVPMDFAQAASFENADIGHCPTQETSRPLPEEEDKEITAAEV
TPPAPPPSPTPAQPLDSLAIEVKSANITADFDSLTGPCVAEIAPVILKGGKQFGLSRNSH
LAIAFDDTKVKNRLTIEFEVRTEAESGLLFYMARINHADFATVQLKNGMAHFGYDLGHGN
TSTMVPQKINDGQWHQIRIFREKQRGILFVDGVSNSTTSPKKADILDVVGMLYVGGLPIN
YITRRIGPVLHSIDGCIRNFKMTEAPVDLDNPTSSFNVGSCFANAQKGTYFDGTGFAKAV
DNFKVGMDILVEFSFRTTRPHGVLLGISGQRMAGMGIELVDEKLLFHADNGVGRFSASYE
PDVPGSVCDGQWHEVTAQKIKSRLELTVDGKKVEGSSSNTLSISADTNDPVFIGGYPEGI
NQFALISSTRFRGCIRDLKLTKGTGKPQEINFSKALELKGVQPLTCPAN
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggcgagcatgtctgtgcaatgtgaatggctccttgtcagaaacctgcaaccct
cagtctggacaatgtgaatgcaagagaaatgttgtgggccggcagtgtgatgagtgcaag
cccaactgctggtgggactcagagaagcaggtgtgtgtgccctgtgactgcagtcccact
ggttccatttcactccactgtgacatgacggggagatgcatgtgtaagccaggattcttt
gggaagcgttgtgacctcagcaggcaagcatatgagcggaaaggggcctcgaggactaca
cagcgtattcaggtccctcctcgaagatggagcttcactagtacaagcgggtgccccagg
ggcgcttacaagccgagctctctgcctgaaacctttggcctccagtcatccagaggctgc
gttccttgcaactgtaactcctttggctcgaagtcatttgactgtgatgagagcggccag
tgcctgtgtcagcctggagtgatggggaagaaatgtgaccgctgtgctcatgggtatttc
cgctttgaagaaggaggatgcactccatgcaactgtccccatgttggcaacaactgcgac
ccagacacaggccgttgtgtttgccctcccaataccataggggaaagatgtgataaatgt
gctccaaattcctggggccacagcattgtcagtgggtgcaaggcttgtgattgcagtgct
gtagggtcactgacctcccagtgtaatccagatactggttgctgcttttgccgcccaaac
tactctggggacaaatgcaacgagtgtaggttgggattccggaatttcccagaatgcatt
ccctgtcgctgctcactggcggggaccgatgttcagacctgtgacctggaaatggagacg
tgctcatgcgctcatctgacaggagcctgcagctgcaaggtgaacgtggaaggggttcat
tgcgacaggtgcaaacctggcacgtatggcctgtacgttgggaatccacttggatgcagc
agctgctattgctttggcctgaccagtgagtgcagcgaggcaaacgggctgatccgtatg
tggttaaccttgaagcctgagcagatgattctaccacttgtggactctagactccagcat
agaactaccaaaggggtgatctttcagcatcctgagattgtagcgaatattgaactggtg
aggcaagatctacgctcagagcctttttattggaagcttccagaacaatttgagggacga
aagttaacagcttatggagggaagctgaaatatgcaatttactttgaagctcgagaagag
acaggcccatcgacctatgaacctcaggtgctcattagaggtggccttcccacaggtcat
aagattatagtgcggcatatggctgctcctcaaatcggccagctgaccaggcatgaaata
gagatgacagaacatgaatggaagtatttgggttccgtggatggaaggtctgtgacccgt
gaagacttcatggatgttatgtatgatatccaatatattcttatcaaagcttcatatggc
agtatcatgagacaaagcaggatctctgaaatctccatggaagttgctgaagaaggaaca
gtgtccgccatgagtccccgtgcttacttgattgagaaatgtgaatgccccctgtcttat
tccggcttgtcatgtgaggcttgttctcctgggttctatcgttcacctgttgtaacccct
gtaaggagacccggtccgtccctgggtacctgtgttccgtgtcaatgccatggacatagc
aggttctgtgaccctgacacctctgtctgtcaggcatgccaacacaacacagctggaaac
cactgtgaaagatgtgcccctggattctatgggattatcagtggatctcctggtgactgc
cggccctgttcttgccccctctccattcctagcaacaattttagccctacgtgtgccatg
gaaggaagaaatgattatcgctgtacagcttgcccacctggatatgaggggcagtattgt
gaaaggtgctcttctggctacactggtaacccgagaagtccgggaggttcttgccaggaa
ttttgtgatgacgaatgtacaggactccttctgaacgacctggatcgcctaaaccagatg
actatgggtgtcaatcttacaggtccacttccacctccttataaattacttctcacctat
gaaaatgtgacacaagaattgaagcatttattgtcacctcagcgaactccagagaggctt
cttctgctggcacaaagaaatcttgatacccttgtcccagagatggatgagcttttgaat
agggcaaccaaagtgaatgcagatggtgaacaaactggaaaggatgctgaaagaacctat
gagagggcaaaatctctgggagaatttgtcaagctcactctccaagatgcagaagccata
aatgaaaaatccaggagactgaatgaaactctgggaatccaagatggagctctagagaaa
agccttcaggagctgcagagagatgttgacaggatgattatagagctgaggagaaagaag
ctagacagacaaggagacatagcccgggatgagctgaaagctgcagaaaaccttctgcaa
agagtggtaaaactatttggagaacctggtgtgaaaaatgaaaaactgaagaacgacatg
aggaaaaaactggaagatcataaaaacaaactggacagtgcccacgacctattgaaagaa
gccctaaataaaataagagaagctaactacctttctgcaatcaatcagaaaaacatgact
gctctggaggcaaagaagcaagctgtagaaggtggcagaaaagacattgagaatacctta
aatgagggttttaacattctgaccaaaatcaaccaacttgtagatgacatcaacactact
ggaaatgatctgaaggacattaatgatagcttagaaccactgtctaagcaaattaaaact
aaaatagatgatctctccaaagaattagaagaaaggcagctcccagaaaaggtgttgcag
gctgaaaatcatgcagcccaactgaatgaatcatcagccatcctggataagatccttgcg
gaagctaaaaacctctccttcaatgccacagtagctttcagagcttacagtaacatcaag
gattcaattgataaggctgaaaatattgccaaggaagccaaggctagtgcaaatgaagcc
atccagctggcaacgggtccccaaggatcattaaaagatggagctaagagctctcttcag
aagagcttcagagttttgaatgaggccaagaagctggccaatgatgttaaagaaaatggc
gataacctaaacaacatgcagaacagattgaaaaatgctgatgaaaagaataaaggtctt
cttaaggctctgaatgacacttttggaaagctcgcagccattcccaatgatacagcagcg
aaggtgcaagcagtgaaagacaaagccaggcaagctaatgacaccgccaatgacgtcctt
gcaaggatcaaagacattaaccagaacctcctgggtctgaggaacaactacactaaactt
gaagacgatgtggcaaaggcaaacgccattgtgaaagatccatcccaaaacaaaatcatt
gcagatgctgatgacactgttaaaaccctggacgatgaagccagtcgcttgctggataaa
ttgaaaccaatcaaagaactccaggataacctggcgaaaaatatatcacagataaaagag
ctgataaatcaagcccgaaaacaggccaactctattaaagtttctgtgtcatcgggaggg
gactgtattcgcacttacaggcctgacatcaagaaaggcagctacaatactatcattctc
aatgtgaagacgggatcccctgataacctacttttctacttgggcagcaacagatatact
gacttcttagccatagagatgcgaaaaggcaaagtgaacttcttatgggatgtgggatct
ggtgttggacgtgtagaatatccagatttgaacattgatgaccaggtgtggtatcgagtt
gaagcctcgcggtctggaaggaatggcactatttcagtccgagctatggaaggtcctaaa
gctagcattgttccaggaacctacagtgcaatctctcttccgggctataatatccttgat
gtggacgcaaatgccctgctctttgttggtggcttgactgaaaaactgaagaaatctgat
gctgttaagaccaccacattctccggctgcatgggtgaaacgttcctggaccacaaaccg
ataggcttatggaattacagagacagagaaggagactgcaaaggatgcacagtcagcccg
caggttacagacagcgagggaactgttcagtttgacggagaaggctatgctttggtcggt
cgcccaacccgctggaatcctaatatctcaactattatgttcaagttcaagaccttttct
tccagtgctttgctaatgtaccttgctacgcaggacctgaaagatttcatgagtgttgag
ctgagtgatggtcgaataaaagtcagctatgatctgggctcaggcacagcttctgctatc
agcaataagatccacaatgatgggaaatggaaatcgttcactctatctagagttcaaaag
caagccaatatctcaatagtggatatagacagtaatgaagaggacagtgttggtacaaca
tccacgggcagcaactttggcctaaacttgaaagcagatgagagaatatattttggcggc
ttaccaacagtgagaaacttaagtatgaaagccagacctgaagtaaatttaaagaaatat
acaggatgcctaaaagatattgaagtttcacgaactccatacaacttattgagcagctcc
gactatgtggggataaccaagggttgttcattagagaaaatacacactgtgagttttgcc
aagcctgggtatttagagctgccaccaatttcatttgacactggcacggagatcaacctg
tccttcagcactagaaaggagtctggcatcattctgtttggcaccagcggggctccagtt
cctggaaggaggaagcgcaggcagattggacaggcttactatgcagtgttcctcatcaag
ggtcgactagaggtgcacctgtcaacaggcttgcgagaggctcgaagaatcgccatccga
cccgagacaggggagtttcatgatggtagagaacattccatccagatagaaagaacaaaa
ggaatatttactgtgcaagttgatgaagacaaaggagaaacacagaggatgtctggggac
cagtcaatctctgtaaagaagctctttgtgggaggtattacccccgacttccatgcacct
ttcctgaggaacataccctccttcgagggctgcatatggaatcttgtcattaacactgtc
cccatggactttgctcaggcggcatcctttgaaaatgcagacattggtcattgtcccact
caggaaacttccagacccctgcctgaggaggaagacaaagagattacagcagctgaagtt
accccacctgctcctccaccttctcctactccagcacaacctcttgattctcttgccatc
gaagtgaagagtgccaacattacagctgacttcgattctctgacgggaccttgtgttgct
gagatagcacctgttatattgaaaggtggcaagcagtttggtctctccaggaacagccat
cttgcaattgcatttgatgacaccaaagtaaaaaatcgtcttactattgagtttgaagtt
cgaacagaagcagagtcaggcttacttttctatatggcccggatcaaccatgctgacttt
gctaccgttcagctgaagaatggaatggctcactttggatatgatttgggccatgggaac
accagcacaatggtcccccaaaagatcaatgatggccagtggcaccagataaggatattt
agggaaaagcaaagaggcatcttgtttgtagatggagtgtcaaacagcaccaccagcccc
aagaaagccgacatcctggatgtggtgggaatgctttatgttggaggattgcccattaat
tatataactcgaagaattgggccggttcttcacagcatagatggctgcatcaggaatttt
aaaatgacagaggctcctgttgacctggataaccctacatccagcttcaatgttggctcc
tgttttgccaatgcacagaaaggaacctactttgatgggacaggatttgccaaagcagtt
gacaattttaaagttgggatggatatactagtggagttttcattccgcacaactcggcct
catggagttttactgggaatcagcggtcagaggatggcgggcatgggcattgagctggtg
gatgagaaacttctgttccatgcagataatggagtaggcaggttttcagccagctatgaa
ccagatgtccctggcagcgtgtgtgacggacagtggcatgaggttacagcacagaagatt
aaaagccgcttggaactgacagtagatggaaagaaagtggaaggcagcagttcaaatact
ctttctatctcagcagacaccaatgacccagtctttattggaggatatcccgaaggcatt
aatcaatttgcactgatcagtagtactcgttttagaggatgtattcgagacttgaagctt
actaaaggcacaggcaagcctcaagaaatcaacttcagcaaagccttggagctaaaggga
gtccaacctttaacatgtcctgcaaactaa
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integrated database retrieval system
