Geotrypetes seraphini (Gaboon caecilian): 117357294
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Entry
117357294 CDS
T09159
Name
(RefSeq) sphingomyelin phosphodiesterase 3-like isoform X1
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00600
Sphingolipid metabolism
gsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117357294
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117357294
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
117357294
NCBI-ProteinID:
XP_033793559
UniProt:
A0A6P8QB26
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Position
1:123184609..123237327
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AA seq
567 aa
AA seq
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MHHSSSEVMALQESPFPNCFLHGLHSFSWALIFPCYWVLDRFLASLIETSVERKQRQRQR
CSLFPLKIFCSGIVFLMLLALSLPIAFIGFIFWVPLQALRRPFDYQRNPSHGMKKEWLTR
EQSKVFNFTSANLCFLPDGLARFSNLSHTQRRSIMVAKNIIQGATRNSSDLYTDIPNHQN
PHSLVYSATSFSSPETFQLEMDANSLQQMKAVNLPRKSGQCEEGSISADPSSVILNTSET
QNGVVLSLPDANSLSEMAQRSGNVPCNISSFFPLDVDFVCLQEVFDKRAATTLRSILSPY
FEHILYNVGVYGLLGCSDFKFFNSGLFLASRYPVLSAQYHHYPNGCGEDALAAKGLLCVK
VQLGEIQGQQLIGYLNCTHLHAPEADGHIRCAQLDFLIQWITQFQETNSQSSDIVAFDVL
CGDLNFDNCSSDDHLEQGHRIFDVYKDPCREGPRKEKDWAIGTLLRPGILYDNAVLTPEN
MKRTLEMEDRMQYIAAPINPDSSAGYPETGPLGSGRRIDYILYREETVSRTLVTDIKEFM
FITQLAGLTDHIPIGMQLSVSSPAGWD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcaccattcttcttctgaagtcatggctctccaagaatcgccattcccaaactgtttc
ctgcatggtctccatagcttttcctgggcccttatcttcccttgttactgggtcctggac
cgtttcctggcatccttaatagagacatcagtagaaaggaagcagagacagagacagcga
tgttccctcttccctttaaagatcttctgcagtggaattgtgttcctaatgctcttggct
ctgtccttgcccatcgctttcattggatttatcttttgggttcctctgcaagctttgcgc
aggccctttgattatcaacggaacccaagtcatggaatgaagaaagaatggttgacgcga
gagcagagcaaagtattcaacttcactagtgcgaatctctgctttctgccagatggtcta
gcaaggtttagtaacctcagccacacacagagaagatctattatggtagccaagaacatt
attcagggagccaccaggaatagcagtgatctctatacagacatacctaaccaccaaaat
cctcacagcctcgtgtacagtgccacaagcttcagctcaccagaaacatttcagctagaa
atggatgccaattcccttcaacaaatgaaggctgttaatcttcctagaaagagtggtcag
tgtgaggaagggtccatcagtgctgatccttcatcagtaatcctaaatacctcagaaaca
cagaatggagtagtgttgagtctgccagatgccaacagcctcagtgagatggctcaaagg
tcaggcaatgttccttgcaatatctcctcattcttccctttagatgtcgattttgtgtgc
ctccaagaagtctttgataagagagcagccaccacgctccggtctatcctcagcccatac
tttgaacacatcctgtacaatgttggcgtttacggactcttgggctgctctgatttcaaa
ttctttaacagtggactttttctggccagtcgttatcctgttctttcagcccagtaccat
cattaccccaatggatgtggggaagatgccctggctgccaaaggacttctctgtgtgaag
gttcagctgggagagatccagggacagcagctgataggatacttgaattgcactcatctg
catgccccagaagctgacggtcacatccgctgtgcacagctggattttctcatacagtgg
atcacccagttccaggaaacgaacagtcagagcagtgatattgtagcttttgatgtactt
tgcggagatctcaattttgataactgttcttccgatgaccatttggagcaaggccataga
atatttgatgtgtacaaagacccctgtcgtgaaggacctcggaaggagaaggactgggct
ataggtactctgctgagaccggggatactttatgacaatgctgttctgactccagaaaat
atgaaaaggactctggagatggaagatcgcatgcagtacatcgctgcacccattaatccc
gatagcagtgctggataccctgagacagggcccttagggtctgggcggaggattgattat
atcctgtacagagaggaaactgtatctaggactttagtgactgatattaaagaattcatg
tttatcacccagctggctggactgacggaccatatacccataggaatgcagctgtctgtg
tcttctcctgctggatgggactag
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