Geotrypetes seraphini (Gaboon caecilian): 117357451
Help
Entry
117357451 CDS
T09159
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117357451 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117357451 (TAF5L)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117357451 (TAF5L)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117357451 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
117357451 (TAF5L)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117357451 (TAF5L)
STAGA complex
117357451 (TAF5L)
TFTC complex
117357451 (TAF5L)
SAGA complex
117357451 (TAF5L)
SLIK complex
117357451 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Ge1_WD40
Beta-prop_NWD2_C
WD_LRWD1
eIF2A
Nbas_N
Mala_s_1-like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
117357451
NCBI-ProteinID:
XP_033793953
UniProt:
A0A6P8R1W6
LinkDB
All DBs
Position
3:complement(281630699..281731889)
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRSEQIQMAVNCYLKRRQFMDTDGPLKQGLRLCQTTEEMAANLTVQAESGYANTVSS
APCQAEPQQYEAQFGRFRNFLSDSDSQYSREVMPLLYPLFVYLHLDMVQNGLKSAVDSFY
SRFHGMFLQNASQKDIIDQLQTTLTLQDILSNFKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNTVLCKVLTLHIHLDVQPVKRTDYQLYASGSTARNGGNSLEPSDVPTSILQNEAALS
MLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCVKIWSLRSR
KLQVEPPRVDVSRIRLACDVLDKEEEEDDHMGTEMKILRGHCGPVYCTRFLSDSSGLLSC
SEDMSIRYWNLSSFTNTVLYHGHAYPVWDLDISPCSLFFASASHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKSVRLWSTQQGTSVRLFTGHRGPVMSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELIGIYTGHLSNVLSAQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtacgttccgagcagattcagatggcagtgaactgctacctcaaacgtcga
cagtttatggacacagatggccccttgaagcaagggctacggttgtgccagactacggaa
gagatggcagccaatctgacagtgcaggctgaatctggatatgccaacacagtgtcttct
gctccttgccaggcagaaccgcaacagtatgaggcccaatttggaaggttccgaaatttt
ctttcagattcggattcccagtacagccgtgaagtaatgcccttgctatatcctcttttt
gtctacctccatctcgacatggtccagaatgggctcaagagcgcagtagacagtttttat
agtcgctttcatggcatgttcctgcagaatgccagccagaaggacatcatcgaccagcta
cagaccaccttgactctccaggacattctttccaattttaagctacgtgcattcctggat
aataagtatgtcattcgcctccaagaagacagctacaattatcttcttcgctacctccaa
agtgacaacaacacagttctgtgcaaagttcttaccttacatattcacctggatgtgcaa
cctgtcaaaagaacagactaccagttatatgccagcggcagcacagcacggaatggaggc
aacagcctggagccctcagatgtgcccacatccatactacaaaatgaggcggcactgagc
atgttgcaggacagcatcaagcgtgtgaaggatgggccaccatcactgaccaccatatgc
ttctatgctttttacaacacagagcagctgctgaatacagcagagatctcttcagacagc
aagctgctggctgctggctttgacaactcttgtgtgaagatctggagcctgagatctaga
aaactacaggtggagccacctcgggtggatgtttctcgtatccgtttggcttgtgatgtt
ctggacaaggaggaagaagaggatgaccacatgggaacagagatgaagatactgcgagga
cactgtggacctgtgtattgcactcgtttcttgtcagacagttcgggcctgttatcctgc
tctgaggacatgtccatcagatactggaatctaagcagcttcaccaacactgtgctgtac
catggacatgcctatccagtttgggatctggatattagtccctgcagcttgttttttgcc
agcgcctcccatgaccgcacagcaaggctctggtcatttgatcggacgtacccccttcgg
atatatgctggtcatctggcagatgtagactgtgttaaatttcaccctaactccaattac
cttgccacaggttccacagataagagtgtgcgcttgtggagcacccagcaaggaacctca
gtgcgtctctttactgggcatcgtggtcctgtgatgtcgctggccttctctcccaatggc
aagtacttggcttcagcaggtgaggaccaacggctcaaactatgggacttagcttcaggt
accctttataaggagctgaggggtcatacagacaacatcacaagccttacttttagccct
gatagcagtttgattgcctcagcatccatggacaactcagtgagggtttgggatattcga
aacacctattgcaacgcccctgcagatgggtcttccagtgaactgattgggatatatact
ggacatctgagtaatgtgctgagtgcacagtttatggcttgtaacctcttgctagtgact
ggaattgcacaagaaaatcaagaacattaa
DBGET
integrated database retrieval system
