Geotrypetes seraphini (Gaboon caecilian): 117357583
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Entry
117357583 CDS
T09159
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117357583 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117357583 (SCN8A)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117357583 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Neur_chan_memb
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
117357583
NCBI-ProteinID:
XP_033794276
UniProt:
A0A6P8R6J4
LinkDB
All DBs
Position
3:203299800..203711729
Genome browser
AA seq
1928 aa
AA seq
DB search
MAAPLIAPPGPDSFKAFTRESLATIEKRIAEEKAKKPAKPDSSHRDDDDENKPKPNSDLE
AGRNLPFIYGDIPKQLVAEPIEDLDPFYLNQKTFIVVNKGKAIFRFSATPALYIISPFNL
LRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKQVEYTFTGIYTFESVVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVVWPIDINESYLINGSKGF
DWDEYIHDDRNFYFLHGALDPLLCGNGSDAGQCPEGYICMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TQEEAERKEAEFKAMLEQLKKQQEDAQAAAMATSAGTVSEDAAEDVGGGRMSHSSSEISK
FSSKSAKERRNRRRKRKQKELSEGEEKGDNEKTVESDDGMKRKGFRLPDNRLGRKFSIMN
QSLLSIPGSPFLSRHNSKSSIFSFKGRFRDLASENEFADDEHSTVEESEGRRDSLFVPGR
SNNRRSSYSGYSQGSRSSRIFPSLRRNVKRNSTVDCNGVVSLIGGPAANMPGGRLLPEPT
TEVEIRKKLSGSLLVSMDQLNASFGRKDRANSVLTVLTNTLVEELEESQRKCPPCWYKFS
NTYLIWECCPMWLRLKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFEHVLYV
GNLVFTGIFTAEMVLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLQGVEGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCK
INSECVLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLV
VSEDLEVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWIKLKVRTFVQK
YFKKKVADEVKPLDELYDKKANCIANHTGVDINRDMDYQKNGNGTTSGIGSSVEKYIIDE
DHMSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESDAEGSKEKMDGTSSSEGSTIDIKP
EAEEAPVEQPEEYLDPENCFTDGCVARFKCCTVNIEEGMGKSWWTLRKTCYLIVEHNWFE
TFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWLAYGFVKFFT
NAWCWLDFLIVAVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETAE
EMFLITDVNNETDCFNLIHQNFTEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAA
VDSRKVHEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPVNQLQGIVFDFITQQVFDISIMILICLNMVTMMVE
TDDQSKRVEDVLYWINVVFIVLFTSECVLKLFALRHYYFTIGWNIFDFVVVILSIVGLCL
SDLIEKYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIFSMFGMSNFAYVKKEGGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCD
MEKENPGSNVKGDCGNPSMGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESAEPLSE
DDFETFYEIWEKFDPDATQFIEYSKLSDFADALEHPLRVPKPNTIELIAMDLPMVSGGRI
HCLDILFAFTKRVLGESGELDMLRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAIII
QRAYRRHLAERGFVYRQPNKLENGGAHQDKKESTPSTASLPSYDSVTKPDQEKQVRERKP
RDVRESKC
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccccttattgcaccaccaggccctgacagcttcaaagccttcacccgtgag
tctctggctaccattgagaaacgtatcgctgaagaaaaggctaagaagccggcaaagcca
gacagcagtcatcgggatgatgatgatgagaataagccgaaacccaacagcgacctggaa
gcaggcaggaacttgccatttatctatggggatatcccgaaacaactggtggctgagccc
atcgaggacttggaccctttttatttaaatcagaaaacttttatagtagtaaacaaaggg
aaagcaatcttccggtttagtgccacgcccgccttgtatattataagtccctttaatctc
cttagaagaatagctattaagattttgatacattcagtattcagcatgatcattatgtgt
actattttgaccaattgtgtattcatgacttttagtaatcctccagactggtcgaagcag
gtggagtatacgttcactggaatttatacgtttgagtcggttgtgaaaatcatcgccaga
gggttctgtatagatggcttcactttcctgcgcgatccatggaactggttggacttcagc
gtcatcatgatggcatatgtgacagagttcgtggaccttgggaatgtctcagcactgaga
acatttagggttctccgagctttgaaaactatttctgtcattccaggtttgaagaccatt
gtcggcgccttaatccaatccgtgaagaagctctctgacgtgatgatcctgaccgtgttc
tgcctcagtgtctttgctctaattggcttgcagctcttcatgggaaacctgaggcaaaaa
tgtgtggtatggcccatcgacatcaatgaaagctatttaataaatggctccaaagggttt
gactgggacgagtacattcatgatgatcgaaacttctacttccttcatggtgcccttgat
cctttgctttgtggaaacggcagtgatgcaggtcaatgtccagagggttacatatgtatg
aaggcagggcggaacccaaactatggctacactagctttgactcttttggctgggccttc
cttgccttgtttcgtctcatgactcaggatttttgggaaaacttatatcagctaaccttg
cgagcagctggaaaaacctacatgatcttctttgtcctcgttatctttgtgggatcattc
tacctggtcaacctgatccttgctgtagtagctatggcttatgaagagcagaaccaggcc
actcaagaggaagctgagaggaaggaggcggagttcaaagccatgttggaacagttgaag
aaacagcaagaagatgcacaggctgctgccatggccacctcggctgggactgtgtcagag
gatgctgcagaagatgttgggggaggacggatgtcccacagctcctcagagatctccaag
ttcagttccaaaagtgccaaggagcggaggaaccgtcggaggaagaggaaacagaaagag
ctatctgaaggggaggagaaaggagacaatgagaagacagtggagtcagacgatgggatg
aagaggaaaggttttcggttgccagataacaggctgggaaggaagttctctatcatgaat
cagtctctgctgagcatccctgggtctccttttctctccagacacaacagcaaaagcagc
atcttcagtttcaagggccgcttccgggatctggcttcagagaatgaatttgcggacgat
gagcacagcacagtggaggaaagtgagggacgccgagactcgctttttgtgcccggccgg
tccaacaatcgacgcagcagctacagtggttacagccagggcagccgctcttctcgcatc
ttccccagcctgcgccgcaatgtgaaacgtaacagcactgtggattgcaacggcgtggtt
tcgctcatcggtggcccggccgccaatatgcctggagggcgtcttctgcctgagcctaca
acagaggtggagataaggaaaaaactctcaggatcactcttggtctccatggaccagtta
aacgcatccttcggaagaaaggaccgggccaacagcgtgctgacagttttgactaataca
ctggttgaagagcttgaagaatcacagaggaagtgccctccttgctggtacaagttttca
aacacctacttgatctgggagtgctgccctatgtggctgaggctgaaggagattgtgaac
atgattgtcatggatcccttcgtggacttggccatcaccatctgcattgttttgaacact
ctgttcatggctatggagcactatcccatgactgaacagtttgaacatgtgttgtacgtg
ggaaacctggttttcacagggatcttcacagctgaaatggtcttgaaactcatagccatg
gacccatactattatttccaagagggctggaatatctttgatggcttcattgtatccctc
agtttaatggaactgggcttacaaggtgtggaagggctttcggtgttgcggtccttccga
ctgttgagagtcttcaagctggcaaagtcctggccaacactgaacatgctcattaagatc
attgggaattccgtgggtgccttaggaaatctgacgctggtgttggccatcattgtcttc
atctttgctgtggtgggcatgcaactctttggcaagagctacaaggactgcgtgtgcaag
atcaatagcgagtgtgtactcccacgctggcacatgaatgacttcttccattccttcctc
attgtcttccgagtgctgtgtggcgagtggatagagaccatgtgggactgcatggaggtg
gcaggacaggccatgtgcttgatcgttttcatgatggtgatggtcatcggaaacctggtg
gtcagtgaagacttggaagtactgaacctcttcttggctttgctgctgagttccttcagt
gctgacaacctggctgcaacggatgatgatggcgaaatgaataatctccagatctctgta
attcggatcaagaagggcattgcctggatcaagctgaaagtccgtacctttgtccagaaa
tactttaagaagaaagtggcagatgaggtcaagccacttgatgagctctatgataagaag
gccaactgtatcgccaaccatactggggttgatatcaaccgggatatggactaccagaag
aacggcaatggcaccaccagtggcattggcagtagtgtggaaaagtatataattgacgag
gaccacatgtctttcatacataacccaaaccttactgttcgagtcccaattgctgttggt
gagtctgactttgagaacctcaatacagaggacttcagcagcgagtccgacgccgagggc
agcaaagagaaaatggatggtaccagctcttcggagggaagcactattgatatcaagcca
gaagctgaggaagctcctgtggagcagccagaagagtaccttgaccctgaaaattgcttc
actgatggctgcgtggcacgctttaagtgctgcaccgtcaacatagaagaagggatgggc
aaatcttggtggaccctgcggaagacctgctacctaatagtggagcacaactggtttgaa
accttcatcattttcatgatcctgcttagcagtggtgccttggcatttgaagatatttat
attgagcagcgaaagactatcaggactatactagaatatgcagacaaggtgtttacctac
attttcatcctggagatgctgctgaagtggctggcatatggatttgtcaagttcttcacc
aacgcctggtgctggctggattttctcattgtggctgtggtagtgaacgccttggttgga
gccattccttccatcatgaatgtattgttggtctgtctcatcttctggttgatattcagc
atcatgggtgttaacctttttgccggcaagtactactactgcttcaacgaaactgctgag
gagatgtttctaatcactgatgtcaacaatgagactgattgcttcaacctcatccatcag
aatttcacggaggtccggtggaaaaatgtcaagatcaactttgacaatgtaggggctggc
tatcttgccctgctccaggttgctacctttaagggctggatggacatcatgtatgcagca
gtagactccagaaaggtccatgaacaaccgaaatatgaagataacatctacatgtacatt
tactttgtcattttcattatcttcggctccttctttaccctcaatctgttcattggcgtc
atcattgacaacttcaatcaacaaaagaaaaagtttggaggacaagatatcttcatgacc
gaagaacagaagaagtactataacgccatgaaaaaattaggttccaagaaaccccagaaa
ccaattcccaggcctgttaatcagttgcaaggaatcgtgtttgacttcatcacccaacag
gttttcgacatcagcatcatgatcctcatctgtctcaatatggtcaccatgatggtggag
acggatgaccaaagtaaacgtgtggaagatgtcctctattggattaatgtggtgttcata
gtcctcttcacttcagagtgtgtgctaaagctctttgcgctcaggcattattacttcacc
attggatggaacatttttgactttgtggttgtgattctttctattgtaggtctgtgcttg
tccgatctcattgagaaatactttgtgtcacctacgctgttccgagtcattcgcttggcc
cgcattggtcgtgtcctgcgtcttatcaagggagccaaaggaatccgcaccctgcttttt
gccttaatgatgtccttgcctgccttattcaacattggcctgctgctcttcctggtcatg
tttatcttctccatgtttgggatgtccaactttgcctatgtgaagaaagagggtgggatt
gatgacatgttcaactttgaaaccttcggcaacagcatgatatgtctttttcagatcact
acatcagccggctgggatgggctgctactgcccatcctaaaccgaccgccagactgcgac
atggagaaggagaacccggggagcaatgtgaaaggtgattgtggcaatccctcgatgggc
atctttttctttgtcagctacatcattatctccttccttattgtggtaaacatgtatatt
gccataattctggagaactttagtgtggccacagaggagagtgctgagccactgagtgag
gacgactttgagacgttctatgagatctgggagaagtttgacccagatgctacccagttc
attgagtactccaagctctcagactttgcagatgccctggagcatccacttcgggtccct
aaacccaacactattgaactcattgccatggacctgcccatggtgagtggtggccgcatt
cattgcttggacattctctttgccttcaccaagcgtgtcttgggtgagagtggggagcta
gacatgctgcgccagcagatggaagagagatttgtggcgtccaacccttccaaagtgtcc
tacgaacctataaccaccaccctgcggcgcaagcaggaggaagtttcagccatcattatc
cagcgggcttacagacgccacctggctgagcggggctttgtgtacaggcagcccaacaag
ctagagaatggaggtgcccaccaagacaaaaaggagagcactccatctactgcctccctg
ccttcttatgatagcgtgaccaagcccgaccaggagaagcaggtgagggaaagaaagcct
agagatgtcagggaatccaagtgttaa
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