Geotrypetes seraphini (Gaboon caecilian): 117357647
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Entry
117357647 CDS
T09159
Symbol
SIX2
Name
(RefSeq) homeobox protein SIX2 isoform X1
KO
K19472
homeobox protein SIX2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117357647 (SIX2)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117357647 (SIX2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
117357647
NCBI-ProteinID:
XP_033794416
UniProt:
A0A6P8R6Y6
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Position
3:385038034..385041767
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AA seq
289 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNSNSHNPLSSSMNGSKTVLGSSEDEKTPSGTPDHTSSSPVLLLST
NPGLQSLHGLGHPQGPSAIPVPSAESMHHHSLQDSILNPMSSNLVDLGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcttcctacttttggctttactcaagaacaagtggcctgtgtctgcgaagtc
ctccagcaagggggcaacatagaacggctgggacgtttcctctggtctttacccgcctgc
gagcacctccacaaaaacgaaagcgtcctgaaagccaaggccgtggtggccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgccccacaaccac
cccaaactgcagcagctctggctcaaagcgcactacgtggaggcggagaagctgcgcggg
cgccccctaggggcggtgggcaaatacagggtgcgcaggaaattccccttgcccaggtcc
atctgggacggcgaagagaccagctactgcttcaaggagaagagccggagcgtgctgcgc
gagtggtacgcccacaatccctacccgtcgccccgagagaagagggaattggccgaggcc
acgggactcaccaccacccaggtgagcaactggttcaagaaccggcggcagagggatcgc
gcagctgaggccaaagaaaggtacgaggagaacaatgagaactccaactccaacagccat
aatcctctgtcgtcttcgatgaatggaagcaaaaccgttttgggaagctcagaggatgag
aaaactccatcgggaaccccagaccacacgtcctccagtccggttttgctgctcagtacg
aacccggggctgcagtctctccacggcctggggcatcctcagggtcctagcgcgatccca
gttcccagcgcagaatccatgcaccatcacagcttgcaggactccatcctaaatcctatg
tcttccaacttggtcgatctcggttcttaa
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