Geotrypetes seraphini (Gaboon caecilian): 117357833
Help
Entry
117357833 CDS
T09159
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04517
IgSF CAM signaling
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117357833 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117357833 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117357833 (SPTBN1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117357833 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
117357833 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
117357833
NCBI-ProteinID:
XP_033794883
UniProt:
A0A6P8QEB7
LinkDB
All DBs
Position
3:complement(373552903..374122032)
Genome browser
AA seq
2362 aa
AA seq
DB search
MTAIATDYDNIDIQQQYSDVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFTK
WVNSHLSRVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQF
LKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLW
CQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNVHYNLQNAFNLAE
QHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEK
MIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNL
EVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQ
LARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVEAVV
AVARELEAENYHDIKRITARKDNVIRLWEYLLELLKARRHRLELNLGLQKVFQEMLYIMD
WMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRAVNASAQKFATEGEGYK
PCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILS
SDDYGKDLTSVIRLLSKHKAFEDEMSGRCGHFQQTIREGEDMIAEEHFGSEKIRERIKDI
QKQWDNLAQLSAIRKTRLEDASSVHQFQADADDIDAWMLDILRIVSSSDVGHDEYSTQAL
VKKHKDVAEEIASYRQIIDSLHEQARSLPDEHAESPDVQGRLSGIEERYKEVAELARLRK
QALQDALALYKMFSEADACELWIDEKESWLNNMQIPEKLEDLEVVQHRFESLEPEMNNQA
SRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRELVDRRKDALNSALSIQNYHL
ECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEAKLTDLEKEAEKL
EAEHPDQAQAILARLSEINNVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQ
TAIASEDMPNTLAEAEKLLTQHENIKNEIDNYEDDYQKMRDMGEMVTQGQTDAQYMFLRQ
RLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTELPTTLE
AAEAAIKKQEDFMTTMDASEEKINAVVETGRRLESDGNINSDKIQEKVDSIDDRHKKNRE
SASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAE
LASNKEWLDKIEKEGKLLIAEKPETEAVVKEKLTSLHRMWEELESTTQTKAQRLFDANKA
ELFTQSCADLDKWLNGLENQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQSQ
VQALTQEGKDTDEVDGKRIIVEQRFMEMLAPLTERKTYLLASKEVHQFNRDVEDEILWVE
ERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQHRNDDIFERSQNILTDSSLNAEAI
KQRLVDLQHLWNLLIEETEKRHIRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKD
EQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAGL
KDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREF
ARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAA
SYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQL
QEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRITLVDTGDKFRFFSMVRDL
MLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHY
ASDEIKDKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLMGQEPYLSSR
EIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPPSP
ELSPKMSDETESPQQWAGIKEGEQISQNGLPSDHESPRVSDNIETNEMVNGAAEQRSSSK
ESSPIPSPTSDRKSKAGFQAQTAATLPAKTQDSTAQMEGILHRKHEWEAHNKKASSRSWH
NVYCVINTQEMGFYKDAKSAASGIPYHNEIPVGLKEAVCEVAVDYKKKKHVFKLKLSDGN
EYLFQAKDDEEMNLWIQAITNAISSDKNEVSASTQSTPASSRAQTLPATVTVTSESSPGK
REKDKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgattgcaacagattatgacaacattgacatccaacagcagtacagtgatgtt
aacaaccgttgggatgatgaatgggacaacgagaacagctctgcacggctgtttgagcgc
tctcggattaaagccttagcagatgaacgtgaggctgttcagaagaagacttttacgaag
tgggtcaattcccacctgtctcgtgtgtcctgcagaattacagacctgtatacagatctt
cgtgatgggaggatgcttatcaaactgctggaggtgctatcgggggagaggcttcccaaa
cccactaagggaagaatgcgcatccattgtttggagaacgttgacaaagccctccagttc
ctgaaagagcagcgggtacacttagagaacatggggtcccatgatattgtggatgggaat
cacaggctaacactgggtctaatctggacgatcattctgaggttccagattcaagatatt
agtgtggaaacagaagataataaggagaagaaatctgccaaggatgccttgcttttgtgg
tgccagatgaagacagctggttatcctaacgtcaacattcacaactttaccaccagctgg
agagatgggatggctttcaatgcacttatacacaaacaccggcctgacttaatagatttt
gataaattgaagaaatcaaatgtgcactacaatcttcagaatgcatttaaccttgcagag
caacatctcggccttactaagctgctggaccctgaagatatcagtgtggatcatcctgat
gaaaagtccattattacctatgtagtgacatattaccactacttttccaagatgaaagca
ttggctgtggaagggaagcgcataggaaaggtgcttgataatgctattgaaactgaaaaa
atgattgaaaaatatgaatctcttgcttctgatcttcttgagtggattgaacaaaccatc
ataatcttgaacaatcgcaaatttgctaactcactggttggtgtacagcagcagttacag
gcattcaacacttaccgtacagtggagaaacctcccaaatttacagaaaaaggaaacttg
gaagtcctgctctttaccatccagagtaaaatgagagctaataatcagaaagtgtacatg
ccgagggagggcaaactcatctcagatataaataaggcctgggaaagactggaaaaagct
gaacatgaaagagaactggcactgcgaactgagctcatacgacaagagaaactggaacaa
cttgctcgtcgatttgatcgcaaggcagctatgagggaaacgtggctcagtgagaatcaa
cggcttgtttctcaggacaactttggttttgaccttccagcagtggaagctgccactaaa
aagcatgaagccattgaaacagacattgcggcctatgaagaacgtgtagaagcagtggtt
gctgtggcaagagaacttgaggctgagaactatcatgacatcaaacgcattactgccagg
aaggacaatgtaatccgcctttgggaatacctgctagaattgttgaaggcacgccgacac
cggctggagctgaaccttgggctgcagaaagttttccaggagatgctgtacattatggat
tggatggatgaaatgaaggtgctgctcctgtctcaggattatggcaaacatctgctggga
gtggaggacctgttacaaaagcatgcgcttgtggaagcagacattgccattcaggcagag
agagtcagagcagtcaatgcctctgctcagaaatttgccacagaaggagaaggttacaaa
ccatgtgatccacaagttattcgggaccgtgtagctcatatggagttctgttaccaagaa
ttgtgtcagcttgcagcagaacgtcgtgcacgcttggaagagtctagacgtttgtggaag
ttcttctgggaaatggctgaagaagaaggttggatacgagaaaaagagcagatcctgtca
tctgatgactatgggaaggatttgacaagtgtaattcgcctcctgagtaagcataaagcc
tttgaagatgaaatgagtgggcgttgtggtcacttccagcagacaataagagaaggtgaa
gatatgattgccgaggagcactttgggtctgagaaaattagagagcgaattaaggatatt
caaaagcagtgggataatcttgcacaattatctgctattaggaagacacgcttagaagat
gcctccagtgtccaccagtttcaagctgatgctgatgatattgatgcctggatgttggac
atcctcagaattgtgtccagcagtgatgttggccatgatgaatattccactcaggccttg
gtcaagaaacataaagatgtggcagaagaaattgcaagctacaggcaaattattgattcc
cttcatgaacaggccaggtctcttccagatgaacatgctgaatccccagatgtgcagggc
agattgtctggaatagaggaaagatataaagaggttgctgaacttgcacggcttcgtaaa
caggctctgcaagatgctcttgctctttacaagatgttcagtgaagcagatgcttgtgaa
ttgtggattgatgagaaggaatcatggttgaacaatatgcagattccagagaaacttgaa
gacttagaagttgtacagcacagatttgaaagtttggaaccagagatgaacaatcaagcc
tctcgtgtggcagtggtgaaccagattgctcgacagctaattcatagtgggcatccaagt
gagaaggaaatcaaagcacagcaagacaagcttaacacaaggtggagtcagttcagagaa
ctggtggatagaaggaaggatgcacttaactctgccctgagtatccagaattaccatctt
gaatgtaatgaaaccaagtcatggattagagaaaagaccaaagtcattgaatctacacaa
gaactgggcaatgaccttgctggagtcatggctcttcagaggaagttaacaggcatggaa
cgagacctagcagctattgaagctaaactaactgatctggagaaggaggcagaaaagcta
gaagctgagcatcctgaccaagctcaggccatcctggcacggctttctgaaatcaataat
gtatgggaagaaatgaaaactactctcaagaatcgggaagagtcccttggggaggccagc
aaattgcaacaatttctgcgtgatctggatgacttccaatcttggttatctagaacccag
actgcaattgcttcagaagatatgccaaacaccctggctgaggctgaaaagttgctgact
caacacgagaacatcaagaatgaaattgataactatgaagatgattatcagaagatgagg
gacatgggggagatggtaacccaggggcaaactgatgcacagtatatgttcttacgtcag
cgtctgcaagccttggacactgggtggaatgagcttcacaagatgtgggagaacaggcag
agcctcctctctcagtcccatgcctaccagttgttcctcagagacactaagcaagcagaa
gcatttcttaataatcaggagtatgttttggcacacactgagttacctactaccttggaa
gcagcagaggcagctattaaaaagcaggaggacttcatgaccacaatggatgcaagtgag
gaaaagataaatgctgtagtagaaacagggagaaggctagaaagtgatggcaatataaat
tctgacaagatccaagaaaaagtggactctatagatgacagacacaaaaagaatcgagag
tcagccagtgagcttctgatgcgactgaaagacaaccgggatcttcagaagtttcttcag
gattgccaggagctgtccctctggattaatgagaaaatgcttacagctcaggacatgtcc
tatgatgaggccagaaacttgcacagcaaatggctgaagcaccaggcatttatggcagag
ctggcatccaacaaagaatggctggacaaaatagaaaaggagggaaagttgctgattgca
gagaagccagagactgaggctgtggtaaaagagaagctgacaagcctgcacagaatgtgg
gaagagcttgaatctactacacagaccaaggctcagcgtctttttgatgctaacaaggct
gaactttttacccagagctgtgcagatttggataaatggttgaatggcctggagaaccag
attcagtctgatgactatggaaaagatctcaccagcgtaaacatcctcctgaaaaagcaa
cagatgctggagaaccaaatggatgtacgtaaaaaagaggtggaagaactacagagccag
gtacaggctctgactcaagaagggaaggacacagatgaggttgacggcaagcgtattatt
gtggagcaaaggtttatggagatgctggcacctctgactgaaagaaagacttacctgttg
gcttccaaggaggtccatcagttcaacagagatgtagaagatgagattttatgggttgaa
gagagaatgcctcttgcaacatctactgaccatggtcacaatctccaaaccgttcaactt
ttaatcaagaaaaatcagactctgcagaaagaaatccagggccatcagcatcgaaatgat
gatatatttgagaggagccaaaatattcttacagacagcagcctaaatgctgaagctatc
aagcaaagacttgtggacctgcagcacctctggaacctgctaattgaggaaacagagaag
cgccacattagactggaagaatctcataaagcacagcaatattattttgatgcagcagag
gcagaagcttggatgagtgagcaggagctgtacatgatgtcagaagaaaaggccaaggat
gagcaaagtgctgtctctatgctgaagaagcatcagatcctggagcaagcagtggaagac
tatgctgaaactgtacaccagctctccaaaactagcagggctctggtggcagatggacac
ccagagagcgaacgcattagcatgcgtcagtcccaggtggataaactgtatgctggtctg
aaggatctgtctgaagagagaaggggcaaactggacgagagacaccgtctcttccagttg
aatcgtgaggtggatgacttggagcagtggattgctgagagggaagtggtggcaggatca
catgagctaggacaagattatgagcatgttacaatgctacaagagagattccgggaattt
gccagggacacagggaacattggacaggagcgtgtggacacagttaaccacatggcagat
gatctgatcaattcagggcattcagatgcagcaacaattgcagagtggaaggatggcctc
aatgaggcttgggctgatcttctggagctgattgatacgaggacgcagattctagctgcc
tcttatgaactgcacaagttttaccatgatgccaaggagatctttggccgcattcaggac
aaacacaagaagctgccagaagagctgggcagagaccaaaacacagtagaagcactacag
aggatgcacacaacctttgaacacgacattcaggccttgggaacccaggtaagacagctt
caggaagacgctgcacgtcttcaggctgcttatgcaggagataaagctgatgacatccag
aaacgggagaatgaggtcttggaagcctggaaagccttattagatgcatgtgagggacgc
agaataacgttggtggacacaggcgacaaattccgatttttcagtatggtgcgtgacctc
atgttatggatggaggacgtcatccgacagattgaggcacaggaaaagccaagggatgtt
tcatcagtggaattgctaatgaacaatcatcagggtattaaagctgaaattgatgctcgc
aatgacagttttacaacgtgcattgagctggggaaatctctgttggccaggaaacattat
gcatcagatgagatcaaagacaagttactacagctgacagagaagagaaaagaaatgatt
gataaatgggaagacagatgggaatggctcagactgattctggaggtacatcagttttcc
agggatgccagtgtggcagaagcctggctaatggggcaggagccatacctgtccagtcga
gagataggacagagtgtggatgaagtggagaaactgataaagagacatgaggcctttgag
aagtctgcagctacatgggatgaaaggttctctgcccttgaaagactgaccacattggag
ttgctggaagtacgcagacagcaggaggaagaagaaaggaagcgccagcctccttctcct
gaacttagcccaaagatgtcagatgagacagaatcaccacagcagtgggctggaataaag
gaaggagagcagatttcacagaatgggcttccttcagaccatgagtctccacgggtttca
gataacattgaaacaaatgaaatggtcaatggagctgcggagcagagatcaagttcaaaa
gagtctagtcccatcccttcaccaacttcagatcgcaagtccaaggcaggctttcaagcc
cagactgctgccactcttcctgctaagactcaggactcaacagctcagatggaaggcatt
ctacatcgcaaacatgagtgggaggcacacaacaagaaagcctcaagcaggtcctggcat
aatgtgtactgtgtgataaatacccaggagatgggcttctacaaagatgccaagagtgct
gcttctggtattccataccacaatgaaattcctgttggtctgaaggaggcagtttgtgaa
gtcgcagttgactacaagaagaaaaaacacgtcttcaaactcaaactcagcgatggtaat
gagtaccttttccaagccaaagatgatgaggaaatgaatctgtggatacaggcaattaca
aatgcaatctcttctgacaaaaacgaggtatccgcaagcacacaaagcaccccagcttcc
agccgtgcccagaccttgccagctactgtcacagtaaccagcgagtccagccctggcaaa
cgagaaaaagacaaagacaaagaaaaggacaaagaaaagaggttcagcctgtttggcaaa
aagaagtga
DBGET
integrated database retrieval system
