KEGG   Geotrypetes seraphini (Gaboon caecilian): 117357859
Entry
117357859         CDS       T09159                                 
Symbol
LARP1B
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsh03019]
    117357859 (LARP1B)
Messenger RNA biogenesis [BR:gsh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117357859 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La SGP Phage_XkdX
Other DBs
NCBI-GeneID: 117357859
NCBI-ProteinID: XP_033794942
UniProt: A0A6P8Q5A1
LinkDB
Position
1:135097613..135374719
AA seq 1026 aa
MSAQVGLPAGGPAANLPRSVRRCRPPGREEKEESPEEQEPAMPALSGDEPAQQEEGEQGK
KLLIEAPPPKVNPWTKKKNLWPDQNALNLSSQDSELHSSKIIKAGKPKQRKPGKASDFSD
ITNWPTPSEIANNECQNIINQQPKLQSRKERKDEKAERKESSEYKENRELQPSAGEYGSE
DEAQSTIQKKKVFKQRWVPLHLEDVRPDNQERPNSRSSSRAQSETNRSLQNNRRNDYARS
WRREKRDDLDEVSSVRSEGGHIRGNFRGRGRGRGRGRGRGRENLRMHYDYLYGYEEQYGE
RTAQAYPAEVNANMMYYYDDGTGVQMYTVDETLLKEYIKRQIEYYFSIENLERDFFLRRK
MDLHGFLPISLIASFHRVQALTTDASLISEALKDSTEVEIVDQKIRRKIEPEKWPIPGPP
PPDFSQTDFSRLVDCPEFVPGKAFSSHTESAPSSPRTGSQPNPKTSMELNSLQAMSKGLS
ASLPDLDSEPWIEVKKRHRTSPVKPKQESVPDSPPAPKQQSAPPAEEQEELDFLFDEEMP
QMEGRKNTFTDWSDDDSDYEIDDQDLNKILIVTQTPPHLRKHPGGDRTGNHVSRAKMTSE
LGKVINDGLYYYEQDLWTDGDENHYTSKQEVENFKKLNLISKEQFDNLTPEPQVGLNQEE
SAQELPQYLQELSSASMARSLPACVPEPSRIHPVRTPRTPRTPRLQDPNKTPRFYPVVKE
ARTLDVKTPRKRKTRHSSNPPLECHVGWVMDSRDHRPRTSSISSSNASPSEGVPLSGNYG
CTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFL
RDHFNKKMYEEFKQLAVEEAKENYRYGLECLFRFYSYGLEKKFRHEIFKDFQEETMKDFE
AGQLYGLEKFWAYLKYSQAKNQPVEPKLQTYLCSFKRLEDFRVDPPISEESGRKRHSSTS
AGEERGQRRLTSNSAAKVIHASKPTAAKQPQPQDPENPPKANAAQEKALDYSSAAVKPGG
GDIPEK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgtccgctcaggtgggcctgccagccggtggccccgccgcaaacctcccgcgttctgtg
cgccgctgccgccccccgggcagagaggagaaggaggagagcccagaggagcaggagccg
gccatgccggcgctcagcggcgatgagccggcccagcaggaggaaggggaacaaggcaag
aagctgctcatcgaggcccccccgcccaaagtcaacccctggaccaagaagaagaacttg
tggcccgaccagaacgccctgaacctaagcagccaggactcagaacttcacagttccaaa
attataaaagcaggaaaacctaaacagaggaagcctggcaaggctagcgactttagtgac
ataactaactggcctacaccaagtgaaatcgcaaataatgaatgtcaaaacatcataaat
caacaacctaaactgcagagcaggaaggaaaggaaggatgagaaagctgagaggaaagag
agcagcgagtacaaggagaaccgagagctacaaccaagtgcgggggaatacggcagtgag
gatgaggcacaatcaaccattcaaaagaaaaaagtcttcaagcagaggtgggtgccactt
catttagaagatgtaagaccagataaccaggagagaccgaattcccgcagtagctcccga
gcacagtcagaaaccaacaggtccctgcagaataacagacggaatgattatgcacgaagc
tggagacgtgagaagagagatgatcttgatgaggtgtccagtgtgagaagtgagggtggc
cacatccgaggaaacttccgagggagaggaagagggagaggaagaggtcgagggcgtgga
agagagaacttgcgaatgcactatgactacttgtatggttatgaagaacagtatggagag
agaactgcacaagcgtacccagcagaagtgaatgccaatatgatgtattactatgatgat
ggaactggtgtacagatgtatactgtggatgaaaccctgctgaaagaatacatcaagcgc
caaattgaatattatttcagtatagaaaacctggagagggacttctttctcagaagaaaa
atggatctgcatgggtttttgcccatttcactaattgccagcttccatcgggtacaggct
ttgactacagatgccagccttatttctgaggcattaaaggacagcacagaggtggaaata
gttgaccagaaaataagaagaaagattgaacctgagaagtggcccattcctggtcctcct
ccacctgacttctcccaaacggacttctctcggctcgttgactgcccggaatttgtacca
ggcaaagccttcagctcacacaccgaatctgcaccaagttctccaagaactggaagccag
ccaaatccaaagacgagtatggaattgaatagcctgcaggccatgtccaaaggattgtct
gctagtttgcctgatttggactctgaaccttggatagaagttaaaaagagacatcgtaca
tctccagtcaaaccaaagcaggagtctgtgcctgattctccaccagctccaaagcagcag
tcagcaccaccagcagaggaacaggaggagctcgattttctgtttgatgaagagatgcct
cagatggaaggccgtaagaacacctttacagactggtctgatgacgattcagactatgaa
atagatgatcaggatctgaacaaaattttgattgtaacacagacgcctccacatctgcga
aagcatcctggtggggatcgcactggtaaccatgtgtcccgagcaaagatgacttctgaa
cttgggaaagtcattaacgatggtctttactactatgagcaggacttgtggacggatggg
gatgagaaccattatacttccaagcaagaggtcgaaaacttcaagaagctgaatctcatc
agtaaagaacagtttgataacctgacaccagagcctcaagttgggctgaatcaggaagaa
tctgcacaagagctgcctcaatatctgcaagagttatcttcggcatcgatggcccgttct
ttgcctgcttgtgttccagaaccttcacgaattcatcctgtcagaacacccagaacacct
cgtacacctcgactacaagacccaaacaaaactccaaggttctaccctgttgttaaagaa
gctagaacacttgatgtaaagacaccaaggaaaaggaagacccggcacagttcaaatcca
cctttggaatgtcatgtcggttgggtaatggattctagagatcacagaccaagaacatcc
tccatcagcagttcaaatgcatccccctcagaaggtgttccactctcaggaaattatggc
tgtacccctaactcgctgcccaagttccagcatccttcccatgaactgctaaaggaaaat
gggttcacacaacaagtgtatcacaaatatcgtagacggtgcctaaatgagaggaaacgg
ttgggaatcggccagtcacaagaaatgaacacacttttccgtttctggtccttttttctt
agagatcattttaataagaaaatgtatgaggaatttaaacagcttgctgtggaagaagcc
aaagagaactacagatatgggttggagtgtctgttcagattttacagctatggtttagaa
aagaaatttcgccatgaaattttcaaggacttccaggaagaaacaatgaaagactttgaa
gctggccaactctatggactagaaaaattttgggcctacctgaaatattctcaagccaaa
aatcagccggtggaaccaaaactacagacttacctctgtagtttcaagagattggaggac
ttcagagttgatccccccatcagtgaagagtctggaagaaaaaggcattcttcaacttct
gcaggtgaggagaggggacagcgaagacttacctcaaactctgctgctaaggtcatacat
gcttcgaaacccactgctgccaaacagccacagcctcaagatccagaaaatcctcccaaa
gcgaatgctgcacaagagaaggccttggattatagcagcgctgctgtgaaacccggagga
ggcgacataccagagaaatag

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