Geotrypetes seraphini (Gaboon caecilian): 117358090
Help
Entry
117358090 CDS
T09159
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117358090 (SOX11)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117358090 (SOX11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117358090
NCBI-ProteinID:
XP_033795469
UniProt:
A0A6P8QFU8
LinkDB
All DBs
Position
3:84284546..84289872
Genome browser
AA seq
368 aa
AA seq
DB search
MVQQAESSETDSNQPREATDTEEGEFMACSPVALDESDPDWCKTATGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDIEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKIDASAKQNSGQTPEKNPSTSSKSAKSSGKKCNKLKSSKPGVKVCNDYGEDFIFEN
LKANKTVKCVFMDEEDEEDEDDDELQIRIKQEEDEEQIGQYNVAKVPASPTLSSSESTEG
ASMYEDVRNASANSRLYYNFKNITKQSSAQSTISLASSRSVSTSSCEKTDDLMFDLSLNF
SQNPQASELGNSSSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEAN
FSDLVFTY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggctgaaagctcggaaacagacagtaatcagcctagagaagcaacagac
accgaagagggggagtttatggcttgcagtccggtagcccttgatgaaagcgacccagac
tggtgtaaaacagctactgggcacatcaaaagaccaatgaatgctttcatggtgtggtct
aaaattgaaagaagaaaaatcatggaacagtcaccggacatgcacaacgctgaaatctcc
aagaggctgggaaagcgctggaaaatgcttaaggacattgagaaaattcctttcattcgg
gaagctgagcgcctgcggctgaaacacatggcagattatcccgattacaaataccggcca
aggaaaaagcctaaaatcgatgcttctgccaaacagaattccggacaaacgccggagaaa
aatccaagcaccagcagcaagagtgccaagagctctgggaaaaaatgtaacaaactgaaa
tctagcaaacccggtgtaaaagtctgcaatgattatggggaagactttatttttgaaaac
cttaaagcgaataaaactgttaaatgtgtgtttatggacgaggaggatgaagaggacgaa
gacgacgacgaactgcagataaggataaagcaggaggaagacgaggagcaaattgggcaa
tacaatgtagctaaagtaccggctagtcccaccttaagctcttcagagtccacagaggga
gccagcatgtacgaagatgtcagaaatgcatctgctaatagcagactttactacaatttc
aaaaacatcaccaagcaaagctcggcgcagtccacaatttccttggcttcatcccgatcc
gtttctacctcatcctgtgaaaagacggacgatttgatgtttgatttgagcttaaatttc
tcacaaaatcctcaggcatccgagctgggaaactccagctcaggaaacctctctctctct
ctcgtggataaggatttggattccttcagcgagggcagtctgggctctcattttgaattt
ccagattactgtacgcccgaattgagtgaaatgatcgcaggggactggctagaagctaac
ttttcagacctggtgttcacttactga
DBGET
integrated database retrieval system
