Geotrypetes seraphini (Gaboon caecilian): 117358255
Help
Entry
117358255 CDS
T09159
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117358255 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117358255 (SMARCA5)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117358255 (SMARCA5)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
117358255 (SMARCA5)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
117358255 (SMARCA5)
RSF complex
117358255 (SMARCA5)
WICH complex
117358255 (SMARCA5)
B-WICH complex
117358255 (SMARCA5)
NORC complex
117358255 (SMARCA5)
BRF complex
117358255 (SMARCA5)
NuRF complex (fruit fly)
117358255 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
ERCC3_RAD25_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
117358255
NCBI-ProteinID:
XP_033795850
UniProt:
A0A6P8QGY5
LinkDB
All DBs
Position
1:150526907..150963764
Genome browser
AA seq
1068 aa
AA seq
DB search
MSATGEQPPPEAAGTDDMDASAAGEVEEHGDSQGATRAGIAAEPAPSDAGPKVEAMDGEE
EVSDDDLSNKQTEINEVDCNYEEKMQTDRSNRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRLKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNICTRFEESPSYVKSGK
LRDYQIRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS
TLHNWMIEFKRWVPTLRAVYLIGDKDQRAAFIRDVLLPGEWDVCVTSYEILIKEKSVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF
NSAEDFDSWFDTKNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEIKIYVGLSKM
QREWYTKILMKDIDILNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLV
TNGGKMVVLNKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQ
ESINAYNMPNSTKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQT
KTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGAT
HVFASKESEITDEDINGILERGEKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY
REKQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILYYRKTIGYKVTLQKLSAAEVRVQVPRNPELPISVQTEKEEQLKIDEAEP
LNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSA
VFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGK
NYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLI
TLIERENLELEEKEKAEKKKRGPKPTSAQKRKIDGIPDCRGRRKKLKL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacaggagagcagccgccgccggaggctgccggcaccgatgacatggacgcc
agcgccgccggagaggtggaggagcacggggacagtcaaggagctacgagagcagggata
gcggcggaaccggcaccgtctgatgccggacccaaggtggaggcgatggacggtgaggaa
gaagtttctgatgatgacttgtcaaacaaacaaactgaaattaatgaagtggattgcaac
tatgaagaaaaaatgcaaacagacagatcaaataggtttgaatatctgttgaagcagaca
gagctgtttgcacatttcatccagccagctgctcagaagactccaacatcacctctaaaa
atgaaacctggccgtccgcgattaaagaaggatgaaaaacagaatcttctttcagttgga
gactaccggcatcgcagaacagagcaagaggaggatgaagagcttctcacagaaagttct
aagacaaccaacatctgcacacgatttgaggaatccccatcatatgtgaagtcgggtaaa
ctgagagattatcaaatccgaggcttgaactggcttatctccttgtatgagaatggtatc
aatggtatcctggctgatgagatgggtctaggaaagacactgcagaccatttctcttctt
ggctatatgaagcactacaggaacatccctggccctcacatggtgttggttcccaagtcg
acattacataactggatgattgaattcaaaagatgggtgccaacacttcgtgctgtttat
ctgattggtgacaaggaccaaagagctgctttcattcgtgatgtgttgttgccaggtgaa
tgggatgtttgtgtaacctcgtatgaaatacttatcaaagagaagtctgtatttaaaaag
tttaattggcgttatctagttatagatgaagcccaccggatcaaaaatgaaaaatcaaag
ttatcggaaattgtgagagaatttaagactacaaatcgtctgcttctcacaggaactcct
cttcaaaataacctgcatgagctctgggcactactcaactttctgctgccagatgttttc
aactcagctgaggactttgattcttggtttgataccaagaattgtcttggagatcaaaaa
ctagtggaacgtttgcatatggtgttacgacctttcctcctccgtcgtattaaggctgat
gtagaaaagagtttacctcccaagaaggaaatcaaaatctatgttggtctcagcaaaatg
caaagagaatggtataccaagatcttgatgaaagacatagatatattgaattcatcagga
aaaatggacaaaatgcgacttctgaatatcctgatgcagttgcggaaatgttgcaaccat
ccttatctgtttgatggtgctgaacctggtcccccatacacaactgatatgcacttagta
acaaatgggggaaaaatggtggtgttgaacaaactactacctaaactgaaggagcaaggc
tcgcgtgtgttgatattcagccagatgacaagagtgctggatatcttagaagattattgc
atgtggcgaaattatgaatattgcagactggatggacagactcctcatgaagaaagacaa
gaatcgatcaatgcatataatatgcctaacagcacgaagtttatatttatgctcagcaca
cgtgccggtggtcttggaataaaccttgcaacagctgacgttgtcattttgtatgattca
gattggaatccacaagttgatcttcaagcaatggatcgcgcacatagaattggccagaca
aaaactgtgagagttttcagatttatcacagacaacacagttgaagaaagaatagtggaa
cgtgctgaaatgaaacttcgtctggactcaatagttattcagcagggaagacttgttgac
caaaacttgaataaattgggaaaggatgaaatgctccagatgattcgacatggtgctaca
catgtatttgcttcaaaagaaagtgaaattacagatgaggacataaatggcatcttggaa
cgtggtgaaaaaaaaactgcagaaatgaatgaaaagctttcaaagatgggtgaaagttca
cttagaaatttcacaatggatacagagtccagtgtatataactttgaaggtgaagattat
agggagaaacaaaagatggccttcacagaatggattgaacctcccaagagagaacggaaa
gctaactatgctgttgatgcttattttagagaagcccttcgggtcagtgagcccaaagca
ccaaaggcacctcgacctccaaaacagccaaatgttcaggatttccagttttttcctccg
cgtctatttgagctacttgagaaagaaattctgtattacagaaaaactattggttacaag
gtgaccttgcaaaaactatctgctgctgaagtcagagtgcaggtacctcgcaatccagag
ctgccaatttcagtgcaaacagaaaaggaagagcagctgaaaattgatgaagctgagccc
ctcaatgatgaagaactagaagagaaggagaaacttcttacacagggatttacaaactgg
aataaaagagactttaatcaattcattaaagccaatgagaagtggggccgtgatgacata
gaaaacatagcacgagaagtagaaggcaaaacaccggaagaagtcatagagtattcagct
gtgttctgggagagatgcaatgaactccaggacatagagaagatcatggctcagattgaa
cgaggagaagccagaattcagagaaggattagtatcaaaaaagcacttgacacaaagatt
ggacgctacaaagcaccatttcaccaactgaggatctcctatggcacaaacaaaggcaag
aactatacagaagaggaagaccgcttccttatctgcatgcttcacaaactaggctttgat
aaggaaaatgtgtatgatgaactcaggcagtgcatccgcaactctccccagttcagattt
gattggttcctcaaatcaaggactgctatggagctgcagagaagatgtaacactttaatt
accctgattgaaagagaaaacttggaactggaagaaaaagaaaaggcagagaagaagaaa
agaggaccaaagcccacctcggcacagaagcgcaagattgatggaatccctgattgcaga
ggaaggcgaaaaaaattaaagctgtga
DBGET
integrated database retrieval system
