Geotrypetes seraphini (Gaboon caecilian): 117358262
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Entry
117358262 CDS
T09159
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00260
Glycine, serine and threonine metabolism
gsh00630
Glyoxylate and dicarboxylate metabolism
gsh00670
One carbon pool by folate
gsh01100
Metabolic pathways
gsh01200
Carbon metabolism
gsh01230
Biosynthesis of amino acids
gsh01240
Biosynthesis of cofactors
gsh04981
Folate transport and metabolism
Module
gsh_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117358262 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117358262 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
117358262 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
117358262 (SHMT2)
Enzymes [BR:
gsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
117358262 (SHMT2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
117358262
NCBI-ProteinID:
XP_033795864
UniProt:
A0A6P8QGZ0
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Position
3:complement(213814392..213862385)
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AA seq
497 aa
AA seq
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MLAPALRRLANSLRRCHPTKAHHGKMMIWARGLSKWTGQESMAESDPEMWTLVQQEKDRQ
CRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYAGTEIVDKIELLCQQRALDAF
DLDPSQWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRISATS
IFFESMPYKLNPVTGLIDYDQLEVTSRLFRPQLIIAGTSAYARLIDYKRMKQVCDEVKAV
LLADMAHISGLVAAKVISSPFEYADIVTSTTHKTLRGARAGLIFYRKGIKSVDKKTGKEI
PYNFEDRINFAVFPSIQGGPHNHAIAAVAVALKQVNSPSFKEYAQQVLQNAKCMAEALLK
KGYNLVSGGTDNHLVLVDLRPKGIDGARADRVLELVSITANKNTCPGDKSALVPGGLRLG
APALTSRGFQEADFEKVVDFIDEGIQIGLDVKRKTAKVQDFKRFLLEDQETVQRLTELRQ
RVENFARSFPMPGFQDH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgctagcaccggctctcaggcgcctggctaactccctgaggagatgtcacccaacgaag
gcccaccatggcaagatgatgatctgggccaggggcttgtccaagtggacggggcaggag
agcatggctgagagtgacccagaaatgtggaccctggtgcagcaagaaaaggaccggcaa
tgccggggtttggaactcattgcttcagagaacttctgcagccgtgctgccctggaggct
ctggggtcctgcctcaataacaaatactcagagggctacccaggaaagaggtactacgca
gggacagagatagtagacaagattgaactgctctgccagcagcgggccctggatgcgttt
gatctggacccatcacagtggggggtcaatgtgcagccgtactccggctcccctgccaac
tttgcagcttacactgccctgctgcagccccacgatcgtttgatgggcttggacctcccc
gacggtggacacctcactcatggttacatgtctgatgtcaagcggatctcggcgacgtcc
atcttctttgagtccatgccctataaacttaatccagtgaccgggttgattgattatgac
cagctggaagtgacatcccgcctctttcgaccacagctcatcattgctggcaccagtgcc
tatgcccgcctgattgactataaaaggatgaagcaggtgtgcgacgaggtaaaggcggtt
cttctcgcagatatggctcatattagtgggctggttgctgccaaggtcatctcctctcct
ttcgaatatgctgacatcgtaactagcactacacataagactttgaggggagcaagagct
ggtctgatattttatcgtaaaggcatcaaatcagtggacaaaaagactgggaaggagatt
ccatataactttgaagacagaatcaactttgccgtcttcccatccatccagggtgggccc
cacaatcatgccatcgctgctgtggctgtagccctaaagcaggttaattctccaagcttc
aaggagtacgcccagcaggtgctgcaaaatgcaaaatgcatggcagaagcactgctgaag
aaagggtacaacctagtctcaggaggaactgataatcacctggtccttgtggacctgagg
ccaaagggaattgatggagctcgggctgatcgagtcctggaattggtatccattactgcc
aataagaacacgtgtcctggagacaagagtgcccttgttcctggaggactgagactagga
gctccagcactcacatccaggggctttcaggaggcagactttgaaaaagtggtggacttc
attgacgagggcattcaaattggcttggatgtgaagaggaaaactgccaaagttcaggac
ttcaagcggttcctgctggaagaccaggagactgtgcagaggctcacggaactgcgccag
cgtgtggagaacttcgcccggtctttccccatgccaggatttcaggatcactaa
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