Geotrypetes seraphini (Gaboon caecilian): 117358719
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Entry
117358719 CDS
T09159
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410
Base excision repair
gsh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117358719 (POLL)
03450 Non-homologous end-joining
117358719 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117358719 (POLL)
Enzymes [BR:
gsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117358719 (POLL)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117358719 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
117358719 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
BRCT
BRCT_2
LIG3_BRCT
NTP_transf_2
HHH
YbjQ_2
Motif
Other DBs
NCBI-GeneID:
117358719
NCBI-ProteinID:
XP_033796180
UniProt:
A0A6P8QJV3
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All DBs
Position
4:289308692..289347155
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AA seq
575 aa
AA seq
DB search
MESRGILKAFRKVKRAREDTEKQDLPKKLKDNQEVQEEWLKPVTALIIQAGIGQARTDIF
QKQIIRNGGKLCSSPSSEITHIIVDDGMDCDRAFRILKIDKLSPKVQLVKSAWLSLCIKE
RKLLSTAGYTIFIPESRYLDEVDQVKKDQQILQNENVATEPTVEPLERAASVQQNVKHSE
QNSVEKPSTMQNFLDDEGSEDEDTRVTQGELDALISGHHLTPTVEKSSCASTVSAVSGKW
VCAQSSQSKNENQNHFITEKLKVLEKAYTLEGDKWRALGYSKAVTALKSYHKPVASFQEA
CKIPGIGKRMAEKIKEILESGHLRKLDYINESVPVIEMFSNIWGVGVKTAQLWYQQGFRS
LDDIRTKATLTNQQAIGLKYYDDFLDRMPREEAAEIEKTVTEMVHSVNPGLLSIACGSFR
RGKLTCGDVDILVTHPDGKSHQGIFGKIIDGLKQRGFLTDDLVKQEENGNQKKYMGVCCL
PGPERKHRRLDVIVVPYSEFACALMYFTGSAHFNRSMRAFAKTKGMSLSEHSLNKAVVRN
GKLKVSPGYPVPTLSEKDVFEVFELPYREPHERDW
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggagtctagagggattcttaaagcttttcggaaagtgaaaagagcaagagaggacaca
gaaaaacaggatctccccaaaaaactaaaagacaatcaagaagttcaagaagaatggctg
aaaccagtgactgcactcattattcaggctggcattggccaagcgaggacagacattttt
cagaaacagatcattcggaatgggggtaagctctgtagctcaccttcttctgaaattaca
cacatcatagtggatgacggaatggactgtgatcgagctttccgaatactgaagatagac
aagctttcaccaaaggtgcaacttgtgaaatctgcttggctgagtttgtgtatcaaagaa
agaaagctattgagcaccgctggctacactatcttcatcccagaaagcaggtacctagat
gaggtagatcaggtgaagaaagaccagcaaatcttgcaaaatgagaatgttgcaaccgaa
ccaacagtagaacccctggaaagagctgcctcagtacaacagaatgtgaaacactccgaa
caaaattcagtagagaagccttctacaatgcagaattttttagatgatgaaggaagtgaa
gatgaagataccagagtcactcagggagagctggatgctctgatctcaggacatcatctt
accccaactgtagaaaaatctagttgtgcctccacagtgtctgctgtctctgggaagtgg
gtttgtgctcagtcctcccaaagcaagaatgaaaatcagaatcacttcattacagaaaag
ttgaaagtcttggaaaaagcttacacacttgagggagacaaatggagagcacttggttac
tcgaaagcagttaccgcacttaaaagctaccataaacctgttgcttctttccaggaagca
tgtaaaattccaggaattgggaaacgaatggctgagaaaattaaagagatcctggagagt
gggcacttgcgcaaacttgactacatcaatgagagtgtacccgtgatagagatgttttca
aatatatggggagttggtgttaagacagcccagttgtggtaccaacagggttttcggagt
ttggatgatatccgcactaaggctactttaaccaaccaacaagccattggattaaaatat
tatgatgacttcttggaccgcatgccacgagaggaggctgcagaaatagaaaaaactgtc
acagagatggttcactctgtcaatcctgggttgctgtctatagcatgtggctccttcaga
cgtggaaagctcacttgtggtgatgttgatattctggttacccaccctgatggaaaatca
caccaaggcatttttggcaaaataatcgatggcctcaaacaaagaggtttccttaccgat
gatctggtcaagcaggaagaaaatggcaaccagaagaaatatatgggagtttgctgcctc
cctgggccagaacgaaagcataggcgactcgatgtgattgttgtgccctatagtgaattt
gcatgtgcactgatgtacttcactggttctgctcacttcaatcgttctatgcgggctttt
gcaaaaacaaagggtatgagtttatcggagcattctttgaacaaggctgtggtgcgcaat
ggaaagctgaaggtcagcccaggttatccagttcctaccttgtcagagaaagatgttttt
gaggtgtttgagttgccgtacagggaacctcatgaaagagactggtga
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