Geotrypetes seraphini (Gaboon caecilian): 117358817
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Entry
117358817 CDS
T09159
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117358817 (LRBA)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Others
Others
117358817 (LRBA)
Endosome - Golgi transport
117358817 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117358817 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
SUKH_6
Motif
Other DBs
NCBI-GeneID:
117358817
NCBI-ProteinID:
XP_033796434
UniProt:
A0A6P8QIC5
LinkDB
All DBs
Position
1:complement(158227474..159529357)
Genome browser
AA seq
2869 aa
AA seq
DB search
MATDDKPVPVQSTGDAVGGEKATDGSSLALTPGVPIRGIRMKFAVLTGLLEVGEVSSRDI
VETVFNLLVGGQFDLEMNFIIQEGESIICMVELLDKCDVTCQAEIWSIFTAVLKKSIRNL
LICTEMGLIELVLKRIDKADSMIADLLVDMLGVLAGYSLTVRELKLFFSKLQGDKGQWPP
HAVKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNI
NVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKYDFKPQKWYMVSIV
HIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMAAVY
LFSEALNAAQIFAIYQLGPGYKGTFKFKAESDLFLPEHHKLLLYDGKLCSCIAFMYNPRA
TDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDH
RQYASDEVDASVCSTLLAFIMELLKNSIAMQEQMLSSKGFLVMGYSLEKSSKTHVTRTVL
ELCLAFAKYLSNLYNGIPLLKQLCDYILLNPAIWIHTPAKVQLTLYTYLSTDFIGTVNIY
NAVRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGLDGPRPTQKEILSLRAFLLMFIKQL
VMKDYGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNGLRVVY
KLLASRSEGIRVQGLKVLGYFLKHLAPKRKTEIMLGHGLFSLLVERLMLHANSFTMTTYN
VLFEILIEQICTQVVHKQHPDPDSSVKIQNPQMLKVIATLLRTSSPSPETMEVRRVFLSD
MIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYHAVKYE
WGGWRVWVDTLSITHSKVTFEMHKESLAQLFREYDGKRGEEVDQGASNQIRTISGVNREI
EVAISSTCLELKEAADTSDISESFDLKQGLQRTRTENGSNDEQSSCSAHEIKSNEVESGT
SLSGADGIHLEPTIIDEVVDSKCETTWVEATEIDINRNEEYGDEGTSDADSFTAIEISSE
VGTPEASEVPKEGTVKVIEDGENVDQKQEIDYLSPPNISESKQEQMTVEGELQEVSTEPM
HASQREPDSSAAEIPASVDFKGTVELPSLPSIATSEIKELVDDQHFDANGKEEVEEIQME
NKEITDVSGATATDSDLDSATNTADVLGGPEKRIAKLDVSSIASDTERLELKASTSQAAD
QPYKSLPEAARQQEPSGSEAASASNGQRRDSRSTMFHIPEFKWSQMHQRLLTDLLFSIET
DIQMWRSHSTKTVMDFVNSSDNVIFVHNTVHLLSQVMDSMIMACGGILPLLSAATSATHE
LENIEPTQGLSVETSITFLQRLISLVDVLIFASSLSFSEIEAEKNMSSGGILRQCLRLVC
AVAVRNCLECQHHLQMKLGGECATGQKAAQSLIGTGKSTTKGPIDIVVGVISPVRDFDRL
LQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRRPQHSQS
FRATENGSNTASPDLEGISPMAAPSEPGPAEDSESSSSIRRRDSGIGEEPVAVLGSSSDM
AAVAGPDGFSAGPDAVSEVLCALSSEVKMPPETISNSEIEQENKTTTSSLSSTKNVNVKD
ILRSLVNTPADGVAVEPTLLPPTFLGTLGDPALEQPIHFRSFDRSVIVAPKKSAVASSPA
AVNVATNAVSVVSSLDSAQAPNLDRDSPGSESSNAKLPAVPAVSSVPEDSTSNMSITERL
EHALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQ
EWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESL
CAQYSADKREEEKMCDHLIRAAKYRDHVTATQLVQKIINILTDKHGAWGSSALSRPREFW
RLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAMEHGQCENSVLPIAAAPDEDILLKGKQS
IKSQVLGNQNSEIEILAEGDDETLSSVEEKDLENLTGPVSLCTVAQLVAPSVVVKGTLSI
TSSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFTEIRAIFSRRYLLQNTALEIFMAN
RVAVMFNFPDQSMVKKVVHCLPRVGIGTNFGLPQTRRISLASPRQIFKASNMTQRWQHRE
ISNFEYLIFLNTLAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPVGALNPK
RAAFFSERHETWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTFFLNLQGGKFDHADRT
FSSISRAWRNCQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTIVSDVELPPWAKT
PEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLSSIA
DPVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQTPLMFTDQAQQDVIMVLKF
PSNSPVTHVAANTQPGLANPAVITVTANRLFAVNKWHNLPAHQGAMQDQPYQLPVEIDPL
IASNTGMHRRQITDLLDQSIQVHSQCFVITADNRFILVCGFWDKSFRVYSTDSGKLVQVI
FGHWDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKNNCIGDNPGSEFATPRAILT
GHDCEITCATVCAELGLVISGSKEGPCLIHSMNGDLLRTLEGPNNCRRPKLIQVSREGHC
VVYYEKGLFCVFSVNGKLQATMETEDNTRAIQLSRDGQYLLTGGDSGVIMVWQVCDLKHL
FAYPGCDAGIRSMAMSYDQRCIMTGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8610 nt
NT seq
+upstream
nt +downstream
nt
atggctactgatgataaaccagttcctgtgcagtcaacaggtgatgcggtagggggagag
aaagcgaccgacggtagttccctggccctcactccgggggttcctattcgaggcatcagg
atgaaattcgcggtcctaacggggctcctggaagttggagaggtgtccagtagagatatt
gtggaaactgtgtttaacctgcttgtagggggccaatttgatttggaaatgaatttcatc
attcaagagggagaaagcatcatatgtatggtggagttgttagacaagtgtgatgtcact
tgccaggcagaaatttggagtattttcactgctgtcctgaagaagagtattcgcaatctg
ctcatctgcactgagatgggactcattgagttagtgctcaaaaggattgataaagctgac
agcatgatagcagatctcttggttgatatgttgggagttcttgctggatacagtttgaca
gttcgtgagttaaagcttttcttcagcaagcttcaaggagataaagggcaatggcctcca
catgcggtaaagttattgtctgttctaaagcacatgcctcagaaatacgggccggatgct
ttcttcaactttccaggaaaaagtgctgcagctattgccttacctccaatagctaagtgg
ccttatcagaatggctttacgtttcatacctggttacgaatggacccagtaaacaacatc
aatgtggataaggataaaccttacttgtactgtttccgaacaaacaaaggtcttggctat
tctgctcactttgttggaggctgcctgattgtaacatcaataaagtcaaaggggaaaggc
tttcagcactgtgtaaagtacgatttcaagccacagaagtggtatatggtgtcaatagtg
cacatttataatcgttggaagaacagtgagcttcggtgttacgtcaatggtgaattggca
tcatatggcgagataacttggtttgtcaacacaagtgacacatttgacaaatgcttcttg
ggatcatctgaaacagcagatgctaatcgagtattttgtggtcagatggcagctgtgtat
ctgtttagtgaagctctgaatgctgctcagatctttgctatctaccagttgggtcctgga
tacaagggcacatttaaatttaaggcagaaagtgatctctttcttcctgaacatcacaaa
ctattgttgtatgatggcaaactttgtagttgtattgcgttcatgtacaacccaagggct
acagatgcacagctctgcctggaatcatcacccaaggataacccatctatttttgttcat
tcgccacatgcccttatgctgcaggatgtgaaggccgttctaacacattctatccagagt
gctatgcattccattggaggtgtgcaggtactatttcctctgtttgctcagttggatcac
aggcagtatgcatccgacgaagttgacgcctctgtttgttccactcttctggcctttata
atggagttgctgaagaattctattgctatgcaagagcagatgctttcttcgaagggcttc
cttgtgatgggatacagtcttgagaagtcttccaaaactcatgttactagaaccgtactg
gaactttgcctggcttttgctaaatacctgagtaatttgtacaatggaataccgttactc
aagcaactgtgtgactacattcttctgaaccctgcaatatggattcacaccccagccaag
gttcagttaacactgtacacttacttgtctactgacttcattggtactgtaaacatttac
aatgcggttcgccgggttgggacagtgctactggtgatgcacaccttgaagtactactat
tgggttgtgaatccccaggatcgcagtggcattactccaaaaggtctagatgggccacga
cctactcagaaagaaattctttctcttcgtgcattcctgctgatgttcattaaacagctg
gtgatgaaggattatggtgtgaaggaggatgaactacaggctattctgaattatctactt
actattcatgaggatgacaatttgatggacgttttgcagttacttgtagctttaatgtct
gagcacccaagttcaatgatccctgcctttgatcaaaggaacggactgcgagtggtttac
aaacttctggcatccagaagtgaagggatacgagtgcaaggcctgaaagtcttgggatac
tttctgaaacatcttgcacccaagagaaaaaccgagatcatgttaggacacggattgttc
tccctacttgtggaaaggctgatgcttcacgcaaactcattcaccatgaccacatacaat
gtcttatttgagatcttaattgaacagatttgcacacaggtagtgcataagcagcatcct
gatccagactcctctgtgaaaattcaaaatcctcagatgctgaaagtgattgcaactctt
ctgcgcacctcttccccttctccagaaactatggaggttcgacgtgtgtttctctctgac
atgatcaagctttttaacaacagcagagaaaacaggaggagtttgctgcagtgctctgtg
tggcaagagtggatgctctcactttgttatttcaaccccaagaactcggatgagcagaag
ataacagaaatggtgtatgccatttttcggattttgctgtaccatgctgtcaagtatgaa
tggggtggctggcgtgtgtgggtggacaccctatcgatcacacattcaaaggtcacattt
gaaatgcacaaagaaagcctggcccagctgtttagagaatatgacggaaaaagaggtgaa
gaagttgatcagggcgcttcaaatcaaattagaaccatctcaggagttaacagagagatc
gaagttgcaataagttctacttgcttggagctgaaggaagcagctgacacgtcggatatt
tctgagagttttgatctgaaacagggcctgcaaaggactcggactgagaatggttctaat
gatgaacagagcagttgctcagctcatgaaataaagtcaaatgaagtagaaagcggcacc
agtttgtctggtgctgatggtattcacttagaaccaactattatagatgaagtggtggac
tctaagtgtgaaactacttgggtagaagcaactgaaatagacataaaccgaaatgaggaa
tatggggatgaaggtacttctgatgccgactcattcacagctatagaaattagctcagaa
gttggtacacctgaggcttcagaggtacctaaagaaggaacagtaaaggtaatagaagat
ggggagaatgttgatcaaaagcaagagatcgactatctttcacctcccaatatttcagaa
tcaaaacaagagcaaatgacagttgaaggtgaacttcaggaagtctcaacagaacctatg
catgcttcccaaagagagcctgactcgtctgctgcagaaattccagcatctgtggacttt
aaagggacagtggagttgccttcattaccatcaatagcaacttcagaaatcaaggaactg
gtggatgaccagcattttgatgcaaatgggaaggaagaggtggaggagattcagatggaa
aacaaggagatcactgatgtcagtggagccacagcaactgatagtgatttggattcagcc
acaaatactgcagatgttttggggggcccagagaagagaattgccaagctagacgtttca
agcattgcatctgatactgagaggctggaactgaaagctagcacaagtcaagctgctgat
cagccttataaatctttacctgaggcagcaagacagcaggagccttccggatcagaggca
gcatctgcttctaatggccagaggagagattcaagatctactatgtttcacatccctgaa
tttaagtggtcacaaatgcaccagcgtctgctcacagatctcttattttccatagagact
gatatacagatgtggagaagccattctacaaagacagtgatggactttgtgaacagcagt
gacaatgtcatctttgtgcacaatacagttcacctcctctctcaagttatggatagcatg
attatggcttgtggtgggatactgcctctgctttctgcagctacatctgctacgcatgaa
ttggaaaacattgaaccaactcaaggattgtctgttgaaacttctataacgtttcttcag
agattgatcagccttgtggatgtgttgatttttgcaagctctcttagtttcagtgaaatt
gaggctgagaagaacatgtcatcaggaggaattttacgccagtgtcttcgtttagtttgt
gcggtggcagtaagaaattgcttggaatgtcagcatcatttgcagatgaaattaggtggg
gaatgtgcaacaggccagaaagcagcacagagcttgattgggactggaaaatctacaaca
aagggtccgattgacatagtggtaggtgtcatttctccagttcgtgactttgacaggctt
ctgcaggacatggatataaaccgactcagagctgtagtcttcagagatatagaggacagt
aaacaggctcagttcctagcactggctgtggtatactttatttctgtccttatggtgtca
aaatacagagacattctggagccacagaatgagagaagacgacctcagcatagccagtca
ttcagggctacagagaatggaagtaatacagcatctccagatttagaaggtatatcgccg
atggctgcaccctcagagcctggtcctgctgaagattctgaaagtagctcatctatacga
agaagagactctggaattggggaggaaccagtggcagtcctaggaagcagttctgacatg
gcagctgttgcaggcccagatggtttcagtgctggtccagatgctgtcagtgaagttcta
tgtgcactgtcctcagaggtcaaaatgcctcctgaaaccataagtaacagtgaaattgag
caggaaaacaagaccacaacatcctctctatcatctacaaaaaatgtcaatgtgaaagat
atccttaggagcttggtaaacactccagcagatggtgtcgctgtagaacctacccttttg
ccgcctaccttccttggaaccttgggtgatcctgcattagaacagcctatacacttccgt
tcctttgacaggagtgtcattgtggccccaaagaaatctgcagttgcctcttctccagca
gctgtgaatgtggctaccaatgctgtcagtgtggtttcttctttagattcggctcaagct
cccaatttggacagggactctccaggcagtgaatcatcaaatgctaaattgccagctgtc
cctgcagtttcttcagtacctgaggactcgacctcaaacatgagcattacagaaaggctt
gaacatgctttagaaaaggttgctcctctgttgagagagatttttgtggattttgctcct
ttcctttctcgaactctgttgggcagccatgggcaagaattgctgatagaaggtacaagc
ctagtatgtatgaaatcgagcagctcagttgtagagttggtcatgcttctctgttctcag
gaatggcagaactcaattcagaagaatgcaggacttgctttcattgagcttgtcaacgaa
ggaagattgctgagccaaaccatgaaagaccacctagtgagggttgccaatgaagctgaa
tttatcctgagcagacaaagagcagaagacattcacagacatgccgagtttgagtcactg
tgtgcccagtattctgcagacaaacgagaagaagaaaagatgtgtgatcacctgatccga
gcagctaagtatcgagaccatgtgactgcaacccagttggtacaaaaaattatcaacatt
ctgactgacaagcatggagcctggggaagttcagcactgagtcgtcctcgtgagttctgg
cgccttgactactgggaagatgacttgcggcgccggcgacgatttgtacgtaacccccta
ggatcgacacatcctgaagcgacactaaaagcagccatggaacacggtcagtgtgagaac
agcgtcttgccaatagcagcagctccagatgaagacattcttcttaaaggaaaacagtcc
atcaagagtcaggtcttgggaaaccagaactcagaaatcgagatattagcagaaggagat
gacgagactttgtcatccgtcgaagagaaggatttagagaacttaactggaccagttagc
ctgtgcactgtggcccagcttgtggccccctctgtagttgtgaagggtacgctctccatt
acctcctccgaactgtactttgaggttgatgaagaagaccccagctttaagaaaatcgat
cccaagattttggcttacacagaagggctacatggaaaatggttgttcacagagattcga
gccatcttctctaggcgctaccttcttcagaacacagcactagaaatctttatggcaaac
agagttgccgtcatgttcaactttccagaccagtccatggtaaagaaagtagtacattgt
ctaccccgagttggcattggcactaattttggattgccacaaacaaggcgtatctctttg
gctagtccccgccagattttcaaagcatcgaacatgactcaacgatggcagcacagagaa
atttcaaactttgaatatttgatatttctcaacacattagcaggacgatcctacaatgac
ttgaatcagtatccagtatttccatgggttatcaccaattatgaatctgaagagctagac
cttacccttcccagcaacttcagagatttgtccaagcctgtgggagcactgaatccaaaa
agagcagccttcttttccgaacgccatgaaacatgggaggatgatcaagttccaaaattt
cattatggcacacattattcaactgcgagttttgtactggcatggctactaagaatcgag
ccctttacaacatttttcttaaatttacaaggtggtaaatttgaccatgcagatagaact
ttttcatcaatctccagagcatggcgcaactgtcagcgggatacctcagatatcaaggag
ctgatccctgaattttattatctccctgaaatgtttgtcaacttcaataattacaatcta
ggagtgatggatgatggaacaatagtgtctgatgtggaacttccaccatgggccaaaacc
ccagaagaatttgttcgcattaacagactggccttggaaagtgagtttgtgtcatgccag
cttcaccaatggattgatcttatttttggatataaacagcaaggacctgaggccgtccgt
gcccttaatgttttctattacctgacatatgaaggagcagtcaatctgagctctatagca
gatcctgtactgagagaggctgtagaagctcaaatccgaagttttggacagaccccgtct
caacttctcatagagcctcatcctccacgaagctctgccatgcaggtgtatctcctcctg
cagactccactgatgttcacagaccaagctcagcaggatgtcatcatggtcctgaagttt
ccctctaactctcctgtcactcacgtggcagccaacacccagcctggcctggcaaatcct
gctgtaattactgtgaccgctaacaggctgtttgctgtcaacaagtggcataatcttcct
gcccatcaaggtgcaatgcaggaccagccgtaccagctgccagtggaaatcgatcctctc
atagccagtaatacaggtatgcacaggaggcaaatcactgaccttttagaccaaagcatt
caagtccattctcaatgttttgtgatcacggccgacaatcgcttcatcctggtttgtggc
ttttgggataaaagcttccgggtgtattctaccgactcaggtaaactggtccaggtaata
tttggacactgggatgttgttacttgtctggctcggtctgaatcctacattgggggagat
tgctacattctgtcaggatcacgtgatgcaacccttctgctttggtactggaatggcaaa
aacaattgtatcggagacaacccaggcagtgaatttgccactcccagagccattctaaca
ggccatgactgtgagatcacctgtgctacagtttgtgctgaacttggactagtaataagt
ggttccaaagaaggaccatgtctgatacattctatgaatggagaccttttgaggactttg
gagggtcccaacaattgccggagaccaaaactcatccaggtctcaagagagggccactgt
gtggtgtactatgagaaaggccttttctgtgtattcagtgtgaatggaaaacttcaggcc
accatggaaactgaagacaatacaagggcaattcaactcagccgagatggacagtacctg
cttactggtggggacagtggagtcataatggtctggcaggtgtgtgacctcaagcacctc
tttgcatatcccggctgtgatgcagggatccggtccatggccatgtcatatgaccagagg
tgtataatgactggaatggcttctggaagcatagtgctgttctataatgacttcaaccgg
tggcatcatgaataccagacccgatactga
DBGET
integrated database retrieval system
