Geotrypetes seraphini (Gaboon caecilian): 117358858
Help
Entry
117358858 CDS
T09159
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117358858 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117358858 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117358858 (USP16)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117358858 (USP16)
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117358858 (USP16)
Ubiquitin system [BR:
gsh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117358858 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
DUF3349
Motif
Other DBs
NCBI-GeneID:
117358858
NCBI-ProteinID:
XP_033796529
UniProt:
A0A6P8QIJ8
LinkDB
All DBs
Position
4:complement(65684818..65803105)
Genome browser
AA seq
858 aa
AA seq
DB search
MGKKRTKGRMPQPAESLEQMEPACQHVRKGLEQGSLKKALLNVNWDVCQDCQTDTKEKHN
SEEEESGASYSVWLCLKCGHRGCDRNSQDQHALKHYATPRSEFHCLVLNLGNWSVWCYEC
DNEVPYNSSNRLGQLVDYIKKQALAEASRTVSEEQENKDFENKKLEKDCKNEQEKEKYET
CKAEKEAPLPSHSDRMMVKGLSNLGNTCFFNAVLQNLYQTSILRELLKEIKMTGMTVQVE
TLDLSLNEPLLVTIEQTPGPLTAAMCQFLTEMQETKRATVTPKELFSQICQKAVRFKGYQ
QQDSQELLRYLLDGMRAEEIQRISTGIIKTMEDSTEKIEEEELKKKVKEYEKKKAVPNFV
DRIFGGELTSTIMCEECRSVSVIHESFLDLSLPVLDDQDGKKNTAQKSSKVYYEKKSEKD
EDSYMKEKAETVTAPSKHRQKKEKKQAKKQAKNQRQQQKIQDKLLPLNVYQNSKTPQEES
QPETEIVQQQTESLNKDEELGINQVDLNKDEELGINQVDLNKDEELGINQVDLNKDEELG
INQVDLNKDEENVICGLGEEENGKSSEQEEEDKISTDDAFETLFSTTEEDSRLDNLYLKD
DNEEKDLVNGINELNLRSALEPSEDHISIFDSETSGTMIYEMVNEDTERAFSTLADRKEI
KTSECSVQNCLFQFTQNEQLSETNKLLCGVCTRRQPNGPKANDKGEKKHVYTSAIKQMLV
SLPPPILTLHLKRFQQAGFNLRKVTKHVQFPEVLDLGPFCALKCKGVAEGETRVLYSLYG
IVEHSGTMRSGHYTAYVKVRTPNVPLSDLVMCEIMPPGSNTEPLKGQWFHISDTHVQAVP
TMKVLNSQAYLLFYERIL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaaagaactaagggcagaatgccacagcctgctgaatccttagagcaaatg
gaacctgcttgtcaacatgttcgcaaaggattggagcaaggcagccttaaaaaggcattg
ttaaatgtgaactgggatgtttgtcaggactgtcagacagatactaaagaaaaacataat
tcagaagaagaagaatccggtgcaagttattcagtctggctatgtctaaagtgtggtcat
cggggctgtgacaggaattctcaagaccaacatgctttaaaacattatgctacacccagg
tccgaattccattgtctagttcttaatttggggaactggagtgtatggtgctatgaatgt
gataatgaagtcccttacaacagttcaaatcgattgggtcagcttgtagactatattaag
aaacaagcccttgctgaagcttccagaacagtttcagaagagcaggaaaacaaagatttt
gaaaataagaagctggaaaaagactgcaagaatgagcaggaaaaggaaaaatatgagact
tgcaaagcagaaaaagaggcaccacttccatcacacagtgatagaatgatggtgaaggga
ctcagtaatctggggaacacctgcttctttaatgctgttttgcagaacttgtaccagaca
tcaatactgagagagctcttaaaggaaattaagatgactggaatgactgtccaggtggaa
actctggacctatcccttaatgaaccgttgctggtaactattgagcaaacaccaggacca
cttactgcagccatgtgccagtttcttactgagatgcaggagacaaaaagagccactgta
acacctaaagagctattctctcagatttgccaaaaagcagtgcgatttaaaggataccag
caacaagacagtcaggaattgcttcgttacttactggatggaatgagagctgaagaaatc
cagagaataagcactggaataattaaaacaatggaggattccactgaaaaaatagaagag
gaggagctaaaaaagaaagtaaaagagtatgaaaagaaaaaagcagttccaaactttgtg
gatcgaatttttggtggtgaactaactagtacaattatgtgtgaggaatgcagaagtgtg
tctgtgattcatgaatcatttctagatttgtctcttcctgttttagatgatcaggacggt
aaaaagaacacagctcaaaaaagttcaaaagtgtactatgaaaagaaaagtgagaaagat
gaagactcctacatgaaggagaaagcggaaaccgtaactgctccaagtaaacaccgtcag
aaaaaagaaaaaaagcaagccaagaagcaagccaagaaccaacggcaacaacaaaaaatt
caagacaagctgcttccactaaatgtctatcaaaactctaaaacaccacaagaagaaagc
cagcctgaaactgaaattgtgcagcaacagacagaatctttaaataaagatgaagaactt
ggcataaaccaggtagatttaaataaagatgaagaacttggcataaaccaggtagattta
aataaagatgaagaacttggcataaaccaggtagatttaaataaagatgaagaacttggc
ataaaccaggtagatttaaataaagatgaagaaaatgtaatatgtggactaggggaagag
gaaaatgggaaaagctcagaacaagaggaagaggacaaaatcagtactgatgatgctttt
gagaccttgttttctactactgaagaagatagtaggttggataatttataccttaaagat
gacaatgaagaaaaggaccttgtgaatggtattaatgaactaaatcttaggtctgctctt
gagcctagtgaggatcacataagtatttttgacagtgagacttcaggaacaatgatatat
gagatggtaaatgaggatacagagagagccttttccaccctcgctgatagaaaagagata
aaaacatctgaatgctcagttcagaattgcttgtttcagttcacacaaaatgagcagctc
agtgagaccaataaattgctgtgcggtgtgtgcacacgaagacaaccaaatggaccaaag
gctaatgacaaaggtgaaaagaagcatgtttatactagtgccataaagcagatgctagtc
tctctcccacccccaattcttactcttcatttaaagagatttcaacaggctggatttaat
ttgcgtaaagttaccaaacatgtacagttcccagaagtgctagacttgggccccttttgt
gcattgaagtgcaagggagttgctgaaggtgagacacgagtgctgtactctctgtatggc
atagttgaacacagcggcaccatgagatcagggcactacacagcttatgtcaaagtacga
actccaaatgtacctctttctgacctcgtcatgtgtgaaattatgcctccaggatcaaac
actgaaccactgaaaggccaatggttccacatcagtgatactcacgtgcaagctgtaccc
accatgaaagttcttaattcacaagcctaccttctgttctatgagcgaattctgtaa
DBGET
integrated database retrieval system
