Geotrypetes seraphini (Gaboon caecilian): 117358903
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Entry
117358903 CDS
T09159
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117358903 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117358903 (NUP93)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117358903 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
117358903
NCBI-ProteinID:
XP_033796640
UniProt:
A0A6P8QL92
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Position
4:complement(145374470..146132204)
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AA seq
833 aa
AA seq
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MQEVELKEKGFVVVMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSR
TLTRTSQESADVRASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEK
DNALLSAIEDSRKRTFVMAEEYHRESMLVEWEQVKQRILHTLLASGEDSLDFTQTEPSYI
SDSGPPGRSSLDNVEMSYAQQICIYNEKIVNGNLQPNLIDLCVSVAEKLNDKNISELWSM
VKQMTDILLVPATDTLKTRCSMETQMALVRQALLCLEKSYKSYTLVTVFGNLHQAQLGGV
PGTYQLVHSFLNIRLPAPIPGLQDGEVEGHPVWALIYYCLRCGDLIAAMQVVNRVQHHLG
EFKNWFQEYIHSEDRRLSPATENKVRLHYRRALRNSTDPYKRIVYCIIGRCDITDNQSEV
ADKTEDYLWLKLSQVCFEDDGTSSPQDRLTLPQLQKQLLEDYGESHFAVNQQPFLYFQVL
FLTAQFEAAIAFLFRIERLRCHAVHIALVLFELKLLLKSSGQSAQLLSQEADDPPYMRRL
NFIRLLMLYTRKFESTDPREALQYFYFLRDERDSQGENMFLRCVSELVIESREFDTLLGK
LEKDGSRKPGVIDKFTRNTKPIISKVALVAENKGLFEEAANLYYLAKNSDKVLELMNKLL
SPVVSQISSPQSNKERLKNMALSIAERYRAQGISAEKSINSTFYLLLDLITFFDEYHTGQ
VDRAFDIIERLKLVPLSQDSVEERVAAFRNFSDEIRHNLSEVLLATMNILFTRYKRLKKT
APATSARPQRVSEDRDSQLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggtggagttgaaagaaaaaggatttgttgtggtaatggacactgaagggttt
ggagaacttctgcagcaggcagagcaacttgcagctgaaacagaaggcatctcggagctg
ccacatgttgaacgaaacttacaggaaatccaacaggcaggagagcggctgcgctctcgc
actctgactcgcacatcacaagaatcggcagatgtccgagcatctgttcttcttgggtcc
agaggacttgatatatcacatatctcccagcggctggagtcacttagtgcagcaactaca
tttgagcctcttgagcctgtgaaggatacagatatacaaggattcttgaagaatgaaaaa
gataatgcattgctgtccgcaatcgaagattctagaaaaaggacttttgtcatggcagag
gaatatcacagagaatccatgctggttgaatgggagcaagtgaaacaaagaattctccat
acgttacttgcttctggagaggactctcttgactttactcagactgagcccagttatatt
agtgattcaggacccccaggtcgcagctctttggacaatgtggaaatgtcttatgctcaa
cagatttgtatatataatgagaagattgtgaatgggaatctgcaaccaaatctaatagat
ctttgtgtttctgtagctgaaaaactcaatgataagaatatttctgaactttggagtatg
gtgaaacaaatgactgacattttgctggttccagcaacagacacattaaaaactcgctgc
agtatggagacacagatggcattggtgcgacaggcattactgtgtctagaaaaaagttac
aagagctacacattggtgactgtctttggaaatctacaccaggcacagcttgggggagta
cctggaacttatcagcttgtacacagtttccttaacatacgactccctgctcctattcca
ggacttcaggatggagaggtggagggtcaccctgtctgggcactaatttactattgcctg
cgttgtggagatttaattgcagctatgcaggttgtgaatcgagtacagcatcatctagga
gaatttaagaattggttccaggaatatattcatagtgaagaccgaagattatctcctgct
actgaaaataaagttcgccttcattataggcgggccctgaggaacagcaccgacccttat
aaaagaattgtgtactgtattatagggagatgtgatattactgacaatcaaagtgaagtt
gctgataaaacagaagactacctatggttaaagttgagtcaggtgtgttttgaagatgat
ggaaccagttctcctcaggacagattgaccctaccacagttacagaaacaattacttgaa
gattatggtgaatctcattttgcagtgaaccagcaaccattcttgtattttcaagtcctg
tttttgacagcacagtttgaagctgcaattgcattcttgttccgtatagagcgcttgcgt
tgtcatgctgtacatatcgccttggttctgtttgaattgaaactactattaaagtcttct
ggacagagtgcacaactgttgagtcaagaagctgatgaccctccatatatgagacgcctt
aattttatccgtcttttaatgctctacactcgtaaatttgagtcaactgaccccagagaa
gctctccagtatttctactttctcagagatgagagagacagtcaaggagagaacatgttt
ttgcggtgtgttagtgagctggtaattgaaagtagagagtttgatacacttctgggaaaa
ctggaaaaagatggcagcaggaagcccggagttatagataagtttaccagaaacaccaag
cctattattagcaaagtggctttggttgcagagaataaaggattgtttgaggaagctgca
aatctttattatttagcaaagaattcggacaaggtattggaattaatgaacaagctgctt
agccctgttgtttctcaaatcagttctccacagtctaacaaagaaagactgaagaatatg
gcactttcaattgcagaaaggtacagagctcagggaataagtgcagagaaatccattaat
tctaccttctacctactactggatctgatcacattctttgatgaatatcatactgggcag
gtggacagggcctttgatattattgaacgtctgaaactagtgcccctgagccaggatagt
gtggaagagcgagttgctgcattcaggaacttcagtgatgaaatcagacataacttatca
gaagttcttcttgcaactatgaatatcttgtttactcggtacaagaggttgaaaaagaca
gctccagccacttctgccagaccccagcgagtatcagaggacagggattcgcaactgcga
agtcaagcccgtgctttgatcacttttgctgggatgataccttatagaatgtctggagac
acaaatgccagactagtacagatggaggtcctgatgaattaa
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