Geotrypetes seraphini (Gaboon caecilian): 117358910
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Entry
117358910 CDS
T09159
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117358910 (MMS19)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117358910 (MMS19)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117358910 (MMS19)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117358910 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
RTP1_C1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
117358910
NCBI-ProteinID:
XP_033796666
UniProt:
A0A6P8RB70
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All DBs
Position
4:283760229..283971076
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AA seq
1017 aa
AA seq
DB search
MAAEENGVWGLVEVFVSGLQDGKAAELATGTQVKAGNCTVLQVVEALGSYLANSEPRTRG
RGVQLLSQVLLQCYPRLTQKEVEVLVLFYENRLKDHHLITPHVLQGLKALSMCETLPQGL
AVSILKAIFQEVHVQSLMQVDRHIVYTIITNFMRTREEELKSLAADFTFGFIQVMDGEKD
PRNLLVAFQIVRDIIVKSYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGITREDLIVSLR
AVLASTPSFAEFLLPLLIEKMDSDVQSAKVDSLQTLNASCAIYGQKELKEFLSSLWSSIR
REVFQTASERIETEGLSALHTLCQSLSRSVVGSDGEDLLDSFLNCVLQDCKHHLCEPDMK
LVWPSAKLLQAAAGASYRSCYKITTSILPLLLEQYNQHTQSSQRRTIVEMLLGFLKLQGK
WIHEEEDENALTGFKDCLCTVMYSALTDPNVQLQLVGIKALTALGSLQGLLSTSDMELVV
DHLYRLIVEKDAQNHLAAMEASGSLARMYPSAFASRLVPKLSEKLQTDQMEPSQSSLRQR
CLRALSAVSTHPCIVRETVPLLLRYLQHVQKGSILCAEGMISVCQSLHLLAMQCQQDTES
LWYYHQTVIPCLLALAVQAALQETQTQAESPVLLDESVLTAMVPVISAACSHLSPELVTP
SVSQVVGLFLHGDVSFLPENSFPRRFQPFQGGESEEKQRQLVALLMAFVCPLQRNVEIPE
LDYLLLELLTLSTSSRCPFAYTSASKCFAGLVNKCPAGEQLDEVLCSVMERIESGLVDGF
DRTRVLTLLLWVTKALVLRYHPLNTQLTDKLISLLTDWELGPAAADGFFLLVSDTPDVLN
KACHADVRIMFRQRFFTENVPKLVQSFHAADEDKKPNYLKALSHVLNSLPKQVLMPELPS
LLSLLLEALSCPDRVVQLSTLTCLEPLLLDASQILSLHMDTLVMKLLSLTCSPAMAVRIA
ALQCVHALTRLPLHVLLPYKMQVIRALAKPLDDKKRLVRKEAVTARGEWFLLGSPGS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggaagagaatggagtgtggggcttggtggaagtgtttgtgtctgggctgcag
gatggcaaagctgcggagctggcaacaggtacacaggtgaaagctggaaactgtacagtt
ctacaagttgtagaagctcttgggtcatatcttgcaaactctgagccaagaacacgggga
cgaggggtccagcttctatcacaggtcttgctgcagtgttatcccaggctgacacagaaa
gaagtggaagttttggttttattctatgagaacaggctgaaggatcaccacctcatcaca
ccacatgttctccagggacttaaagctctgagtatgtgtgaaactcttccacaaggactg
gccgtttctatacttaaagcaatatttcaagaagttcatgttcagtccctgatgcaggtg
gaccgtcacattgtttacaccatcatcaccaacttcatgcggactagagaagaggaactg
aagagtctggctgcagatttcacgttcggattcattcaagtgatggatggtgagaaagat
cctcgcaatctactggtggccttccagatcgttcgagacatcattgtgaagagctactca
ctaggaccatttgtagaggaattatttgaagtaacatcctgctacttccccatagacttt
accccaccacccaatgatccacatggcattacaagagaggacctgattgtgagccttcgt
gcagtgctagcttctacacccagctttgcagagtttctgttgccattactgattgagaag
atggactcggatgtgcagagtgcaaaagtcgactctctgcagacattgaatgctagctgt
gccatctatgggcagaaggaactgaaggagtttctttcaagtctctggtcatccattcga
agagaggtgtttcagaccgcgagcgagaggattgaaacggagggtttatccgcactgcat
actctgtgtcagtcgctgtcccgctcagtggttggctcagatggagaggatctcttggac
tctttcttgaactgtgttctacaggactgtaaacaccatctttgtgaaccagacatgaag
ttagtgtggccaagtgccaaactcctccaagctgcagctggcgcctcctacaggtcatgc
tataaaatcaccacaagcatactgccactgctgctggagcagtacaaccagcacactcag
agcagtcagagaaggacaatcgtggagatgcttctgggtttcctgaaactgcaggggaag
tggatacatgaagaggaagatgagaatgcgcttacaggtttcaaagactgtctctgcact
gtgatgtactctgcactgactgatcccaatgtccaactgcagctggtgggaatcaaggcg
ttgacggccttgggctctctacaagggttgttgtcgacctcagacatggaactagtggtg
gatcacctctacaggctcattgtggaaaaggatgcacaaaaccatttggcagcaatggaa
gcttctgggtcgctggccagaatgtacccatctgcctttgccagcaggctggtgccgaag
ctctctgaaaaattacagacagaccagatggagccaagccagagttctctgaggcagcgt
tgtctcagggccttatctgcagtttctacacatccctgtatagtgagggaaacagtgcct
ctcctgctgcgctacttacaacatgtacagaaaggaagcatcttgtgtgctgaaggcatg
atctctgtttgccagagccttcaccttctggcaatgcaatgccagcaagatacagagagc
ttgtggtactaccatcaaacggtcatcccttgtctgctggctctagccgtccaagctgca
ttgcaagagacacagacccaggcagagtctcctgtcttgctggatgagagtgtcttgaca
gccatggtgccagtgataagtgcagcgtgcagccatctgagcccagagttagtcactccc
agtgtctctcaggttgtggggcttttcctgcacggagatgtttcttttctcccagaaaac
agcttccctcgcagattccagccattccaggggggcgaatcagaagagaagcaaaggcaa
ttagtggccttgttaatggcgtttgtatgccccttgcagagaaacgtggagatcccagaa
cttgactacttgctgctggagttgctgacactgagtaccagctctcgctgtccttttgcg
tacacatctgcctcaaaatgctttgcaggactagtaaacaagtgcccagcaggagagcag
ctggatgaagttctgtgcagtgtcatggaaagaattgagtcaggactggtggacggtttt
gacagaactcgagttctcacacttctactctgggttaccaaggcactggtgctgcgatat
caccctttgaacactcagctgactgataagctgatcagcttattaacagactgggagcta
ggtcccgctgctgccgatggcttcttcttacttgtgtctgacacgccagatgtgctgaac
aaagcctgccacgctgatgtacggatcatgttccggcagcgattcttcactgaaaacgtg
ccaaaattagtgcagagcttccatgcagcagatgaagataagaagccaaactacctgaag
gccctctcacatgtactgaattctctaccaaagcaagtcttaatgccagagctgccctcg
ttgttgtctctcttgcttgaggccttgtcctgccctgatcgcgtcgtccagttgtccacc
ttgacatgtctagagcctttgctgctggacgcttcccagatactgagcctgcacatggac
actcttgttatgaagctgctcagtctcacctgcagtcctgccatggctgttcggattgct
gcattacaatgtgtgcacgctctcaccagactgccactccatgtgcttctcccctacaag
atgcaggtaatccgggcactggccaagcccttggatgataagaagaggttggtgaggaag
gaagctgtcacagctcgtggggagtggttcctgttgggaagcccaggtagctga
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