Geotrypetes seraphini (Gaboon caecilian): 117358964
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Entry
117358964 CDS
T09159
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117358964 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117358964 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gsh02044
]
117358964 (SEC31B)
Membrane trafficking [BR:
gsh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117358964 (SEC31B)
Secretion system [BR:
gsh02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117358964 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_EML
TPR_Sec16
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_SPT8
Prp18
Beta-prop_DCAF12
Beta-prop_DCAF4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
117358964
NCBI-ProteinID:
XP_033796839
UniProt:
A0A6P8QLR8
LinkDB
All DBs
Position
4:185563011..185768185
Genome browser
AA seq
1195 aa
AA seq
DB search
MKLKEIERAAVQVWSPASHYPLYLATGTSAQQLDASFSTSAALEIFEVDFGDPYLDTRHR
GSLPSASRFHKLIWGSFGVGPSDFSGVIVGGGDNGVITLYSASQILTSGKEPVIGQSQKH
TGPVRALDLNPFQSNLLVSGANDSEIYIWDLNNFSVPMTPGTKSQPLEDISVVSWNSQVQ
HILSSVHTSGKAVLWDLRKNEPIIKIGDHSNKMHCSGMMWHPEVATQLVLSSEDDRMPVI
QLWDLRFATSPLKVLENHTRGVLSISWCRADPELLLSSAKDNRILCWNPCSGEVVYELPT
GSQWCFDVQWCPRYPSVFSAASFDGWINVYSVMGGNLDTHQQNQCDKISASFNNLDPFGT
GQLLPPLQVPQQVQATVIPPVMKPPRWICRPVGVSFAFGGKLVTFGFLRNKPQELSQFQV
FISQVTTEKDFLVQSRELQTALASGNLLPYCQSKVENSELQSEKNIWNFLKVNFEHDARI
KFLKLLGYSKEQLNKKISSLLGENTLGKDLPLEVGDLGHHIHSVSGQGSDCFTGLVSSSE
FFSCLPQNTAKFEIPITTDTDGLISQALLIGDFKGAVELCLNSGRFADAIILAIAGGEKL
LAQTQLRYFAKQKNRITSLLSSVVQHKWKEIVLNCNLMNWKEALAILLTYSKPDEYAKFS
DILGGRLESEDDGRMSSHACLCYITSRNMEKLIACWSKIHKMTCPLSLQDLIEKVMVLGK
SIEFLQGTAPLVYGPLFAEKITQYVSLLASQGNLAAAMNFLPDNSEELLICQLRDRLYHA
QGEAVIDQQAPVFPYPRAPITAGSHKLPVAKTSTVPQEAAENVDPQQGFYHPTVNPPVPS
VPPLFPPQPLPAFLRTPQGFSLSTTGLARAAALPPPPPSPTYLQHPATAVISAFPQPFRQ
PQEPLPGPAAFPPTSSMPSGPPGSPAPLGPSTLGSHFPAASVPTVPHIMPQTASHSFPIL
GQPSKPTSLTTVQSPYSYPSGMGYSPGGPGALTFNPLAPSSLPPPPTVGAPEVWHKPLSV
RGVLQRKKMLDHHMPPVPITVPVMNLPTQPEIFLPQPASNQDSSQIPPGAPKEFLQMSVE
RIEKKALPAEHHLLKKTLDELVQRCSVAAIDPKTKRKLEDATQRLEYLYDKLREQTLSPH
IQAGLHEISRCIEARNYQRGLVVHTQVVSSSNFSEISNFMPALKVLMTVASKLGV
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaaattgagcgagcagctgttcaagtttggagtccagcaagccactat
ccactgtacctagcaacaggtacatcagcccagcaattggatgcctccttcagtaccagt
gccgccctagagatctttgaagtggattttggggatccttatctagacacaaggcataga
ggaagccttccatcagcgagcaggtttcacaagctgatctgggggagctttggagtgggg
ccctctgatttctcaggggtgattgtaggtggaggggataatggagtgataactttgtac
agtgcatcccagatcctaacttcagggaaagagcctgtgattggacagagtcagaagcac
acaggtcccgtgagagctcttgacttgaatccttttcagagtaatcttctggtctctggt
gccaatgactctgagatttacatctgggacttgaataacttcagtgtgccaatgacccca
ggaactaaatcccagcctctagaggacatcagtgtggtatcttggaacagtcaagtacag
cacatcctgtcttcagtacacaccagtgggaaggccgtgttgtgggatcttcggaagaat
gaacccattatcaaaattggtgaccacagcaacaagatgcattgctcaggaatgatgtgg
cacccagaagtagccacccagttggtgctttcttctgaagatgatcgcatgccagttatt
caactgtgggacttgagatttgccacctctcctctgaaggtgctggagaatcatacaaga
ggagttctgtctatttcatggtgtcgggcagacccagagctgttgctcagcagtgcaaaa
gacaaccgtattctatgctggaacccctgcagtggagaggtggtttatgaattgcccaca
gggagccagtggtgttttgatgttcagtggtgcccccgttacccatctgtgttctctgct
gcttcatttgatggctggatcaatgtttattctgttatgggtggaaatttggacactcat
cagcagaaccagtgtgacaagatttctgcatcttttaacaatttggacccatttggaaca
ggacagctgcttcctcctttgcaggtaccacagcaggtccaggccacagtgatcccacca
gtgatgaagcctccacgttggatttgcagacctgtaggagtttcatttgcttttggaggg
aaattggtcacttttggcttcttaaggaacaaaccacaggaactctctcagttccaagtg
ttcatcagccaagtcaccactgagaaggacttccttgtacaatcaagggagctacagaca
gccctagcatcaggaaatctgcttccctactgccaaagcaaggttgagaactcagagcta
caatctgaaaagaatatatggaactttttgaaggtaaattttgagcatgatgcaagaatt
aagtttctgaaactgcttggatacagcaaggagcagctgaataagaagatctcctcactt
ttgggtgaaaataccttgggtaaagatttaccattggaagtaggtgacctgggccatcac
attcactcagtatctggacagggatcagattgctttacaggactggtatcttcttcagag
tttttcagctgccttccacaaaatacagccaaatttgagatccccatcacaacagataca
gatggcctaatcagtcaggcgcttctgattggagattttaagggagctgtagaactgtgc
ttgaatagtggccgctttgcagatgccattatccttgctattgctggaggggagaagctc
ctggcacaaactcagctgcgatactttgccaaacagaaaaacaggataacctcacttctt
tcttcagtggttcagcacaaatggaaagaaatagtgctcaattgtaacttaatgaattgg
aaggaagctctggccatcctactgacctactcgaaaccagacgaatatgccaaattcagt
gatattctgggtggtcgcctggagtctgaagatgatgggaggatgtcatctcatgcctgc
ctttgttatatcacctcaagaaacatggaaaagttgatagcatgctggtcaaagatccac
aagatgacatgtcctctgtcactgcaggacttgatcgagaaagtgatggtactgggaaag
tccattgagtttctgcaggggacagcacctcttgtatatggtcctttgtttgctgaaaaa
atcacacagtatgtcagcctgttggcttcacaaggcaatttggcggctgctatgaacttt
cttcctgataattcagaggagctcctgatttgccagctgcgggaccggctataccacgct
cagggagaggctgtgatcgaccagcaggctcctgttttcccctatccacgtgctcccatc
acagctggtagccataaattaccagtggctaagactagcacagtgcctcaagaagcagct
gagaatgtggatccccaacagggtttttaccatcccactgtcaaccctcctgttccatca
gtgccacctttgtttcctcctcaaccactgccagcatttttgagaactccccaaggcttc
tctctaagtaccacaggattagccagagcagcagcactaccaccaccaccaccatcaccc
acctatctccagcaccctgcaacagcagtgatatcagcatttcctcagccatttagacag
cctcaggaacctctgccagggccagctgcctttcctcctacctcttccatgccttcagga
cccccaggctctccagctcccttgggaccttccacccttggatctcactttccagcagct
tctgttccaactgtaccacacatcatgccacagactgcttcccactccttccctatcctg
ggacagccatccaagcctacctcattgacaactgtgcagtctccatacagctacccatca
ggaatgggctactctccaggggggcctggcgctctaacgtttaatcccttggccccttcc
agtcttcctccacctcctacagtaggagcccctgaagtttggcacaagcccctatccgtc
agaggagttcttcaaagaaagaagatgctagatcaccatatgcctccagttccaatcact
gttccagtaatgaaccttcctacacagccagagatttttctaccacagccagccagcaac
caagattctagtcagatacctcccggggcacccaaagagtttcttcagatgtctgtggaa
agaattgagaagaaagcgttaccagcagagcaccatctacttaaaaaaaccttagatgag
ctggtacaacgatgctcagtagctgcaatcgacccaaaaactaaaaggaaactggaggat
gcgacgcagagacttgaatacctgtatgacaagctccgagagcaaactctttcccctcac
attcaggctggactccatgaaatctcccgctgcattgaagctcggaattaccaacggggt
ttagtcgtgcacacacaggtggtcagcagtagtaacttcagtgagatctccaatttcatg
cctgccctcaaagtcctcatgacagtagccagcaaattgggtgtgtaa
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