Geotrypetes seraphini (Gaboon caecilian): 117358967
Help
Entry
117358967 CDS
T09159
Symbol
SGPL1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00600
Sphingolipid metabolism
gsh01100
Metabolic pathways
Module
gsh_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117358967 (SGPL1)
Enzymes [BR:
gsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
117358967 (SGPL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
117358967
NCBI-ProteinID:
XP_033796848
UniProt:
A0A6P8R8U6
LinkDB
All DBs
Position
4:185336962..185542460
Genome browser
AA seq
564 aa
AA seq
DB search
MDLWKTLEIYREIGLKYLYEIRAYVNGLCSGMEAWQLITVTFVTTLLAVWLYEFLFQSES
LISRFKIQCIKISRKLPFIGVQIQKKLDKAVDDMISTMLCLKDGISYVKALPAKGLEQAK
VLQKVKEYNSLGNVPWDNGKISGAVYSGEERLTELFVKVYAEFAWSNPLHVELFPGVQKM
EAEVVRMTCTLFNGGPESCGSMTSGGTESILMACKTYRDLAFKKGIKHPEILAPNSVHAA
FDKAAHYFRMKLVHIPLDKKTMQVDVKAMAKAISQNTAMLVCSAPNFPHGIIDPIEDVAK
LAVKYKIPFHVDACLGGFLIVFMKKAGFPLQPFDFGVKGVTSISADTHKYGYAPKGSSVI
MYKNEKYRHYQFFVAPDWQGGIYASPTIAGSRAGGIIAACWATMMHIGEDGYVKATKKII
ETARFIDSELRKTKNIFVLGKPQVSVVAIGSDSFDIFQLSNSLSTKGWNLNNLQFPSSIH
MCITLQHIKPGFATQFIKDVRESINEIMKDPRAKTTGKGAIYGMAQCIPDRSMVTEVVQC
YLDCLYRTDDASNNKHLNSPPVPP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtggaaaactttggaaatctacagagagattggcctgaaatatctgtatgaa
ataagggcatatgtgaatggtctttgcagtgggatggaagcatggcaacttatcacagtt
acctttgtaaccacgctgctggcagtatggctttatgaattcctcttccagtctgagagt
ttaatttcaagatttaaaatacaatgtattaaaatatcaagaaaattgcccttcattggt
gttcagatccagaagaagttggataaggcggtggatgacatgattagtacaatgttgtgt
ttgaaagatggaataagctacgtgaaggcactgccagcaaagggcttggagcaggctaag
gtcttgcagaaggtaaaggagtataactctctgggaaatgtgccatgggataatggaaag
atttctggagctgtgtacagcggagaagaaagacttactgaattgtttgtgaaggtatat
gcagagtttgcctggagcaaccctctccatgttgagttatttccgggggtacaaaagatg
gaagccgaagtggttagaatgacctgcacactctttaatggaggaccagaatcctgtgga
tcaatgacttcaggtggaactgagagcattttgatggcctgtaaaacttacagagatctg
gcttttaaaaaagggatcaaacatccagaaatactggctccaaacagtgttcatgcagca
tttgacaaggctgcccattattttaggatgaagcttgttcacattccactggataagaag
acaatgcaagtagatgttaaggcaatggcaaaagccatttcccaaaatacagcaatgctg
gtctgctcggctcctaattttcctcatggaattatcgaccctatagaggatgtcgcaaag
ttagcagtaaaatataagatcccttttcatgtggatgcttgcctaggtggtttcctcatt
gtctttatgaagaaggctggcttccctcttcaaccatttgactttggagttaaaggtgtg
acaagtatttctgcagatacacacaagtatggctatgctccaaaaggctcatctgtgata
atgtacaaaaatgagaaatacaggcattaccagttctttgttgctcctgactggcaggga
gggatatatgcttcccctacaattgcaggctcacgagccggtggtatcattgcagcatgc
tgggcaacaatgatgcacataggggaagatggctatgtgaaggctacaaagaagattatt
gaaacagcacgcttcattgattcagagttgcggaagacaaaaaatatctttgtgttaggc
aaacctcaggtgtcggtcgttgctattgggtctgactcatttgatattttccaactttct
aattcattgagcacaaagggatggaacctaaacaacttgcagttcccatctagcattcac
atgtgcattaccctgcagcacataaagcctggatttgcaacacagttcataaaagatgtt
cgtgaatctataaatgaaatcatgaaggatcctagggctaagacaactggcaagggtgca
atctatggcatggcacagtgtattcctgacagatccatggtgacagaggttgttcaatgt
tacttggactgcctctacagaacagatgatgcttcaaataataagcacttgaatagtcct
cctgtacccccctaa
DBGET
integrated database retrieval system
