Geotrypetes seraphini (Gaboon caecilian): 117359178
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Entry
117359178 CDS
T09159
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04517
IgSF CAM signaling
gsh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117359178 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117359178 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117359178 (RAPGEF2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117359178
NCBI-ProteinID:
XP_033797381
UniProt:
A0A6P8RC45
LinkDB
All DBs
Position
1:169130814..169782810
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AA seq
1642 aa
AA seq
DB search
MASYVDNSFRQAVMKKPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTLPADF
TKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLPETAVDS
EDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYSDGRTEILCMGNSFGVSPTM
EKEFMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTSERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMAVGKKLLEWFNDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAAKAKRRL
ITLTKPSREAPLPFTLLGGSEKSFGIFVDSVDLASKATEAGLKRGDQILEVNGQNFENIQ
LSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEDKRNGAPHLPKIGDIKKASRYSIPDL
AVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQDDSIVG
LRQTKHIPAALPVSGTLSSSNPDLLQSHHRILDFSTTPDLPDQVLRVFKADQQSRYIMIS
KDTTAKEVVIQAIREFALTATPEAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRY
YLKNNMETETLCSDEDAQELLRESQLTLLQLSTIEVATQLSMRNFELFRNIEPTEYIDDL
FKLKSQTSCVNLKKFEDAINQETFWVASEILRETNQLKRMKIIKHFIKIALHCRECKNFN
SMFAIISGLNLAPVARLRSTWEKLPNKYEKLFQDLQDLFDPSRNMAKYRNVLNSQNLQPP
IIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPALMFRTRK
KKWRSLGSLSQGNTNAAVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLD
LEMDEENLQTLSLQCEPATNTLPKNPGDKKCGKSETSPGTPRAGTQQKTQQQQPKVNQAL
QVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLERHKKQAEDAQSNASSQL
SSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSMPMSLHDERRQR
HSVSIVETSLGMGRIDRRATMEPDQCSLGSFTPMLENRGLYAGTTVLSSPSTEELSQDQG
DRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHIPFDGSGDNSSLWVSGSH
MDQTMFPDYSTKYSRQSHGREGFDQAQSRASWASSTGYWGEDSEGDTGTIKRRGGKDVTA
EAETSSITSVTSEESKPLPIAAHIVVSSSNAKGLIARKEGRYREPPPTPPGYVGIPIADF
TEGHSHPIRKPPDYNIALKRSRMMAGKCETQGSSTPPSHPANRPTSKPQWHKPNESDSRF
THYQSQGFSTEDEAEDEQVSAV
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtacgtggataacagcttccggcaggcggtgatgaagaagccggcagaacgc
agcccgcaggacctggagatagtgtattcatacctgcatggaatggaagcattgtccaat
ctgcgagagcatcagctgagattgatgtgtgaaaccgttcgatatgaaagacatgaagca
aatgaagttttgtattaccctgatgatattggcacatgctggtatatccttctgtctggt
tcagtattcatcaaggagtccatgtttctaccgaggagcagttttggcaagcgttctgca
ggaagcttcaggcgtggttgtgaatgcattgttttggagccttcggaaatgattgtggtg
gactatatggatgaaaatgaagaatattttcaacgccaagcatctcacagacagtctcga
aggagatttaggaaaattaaccagaaaggagaacgacaaacgattattgatactgtggat
ccttatcctgtgggcaagccacctctaccaagaggttatcatacccttcctgcagatttt
acaaaattgcaccttacagatagtctccatccacaggtgacccatgtttcatccagtcat
tcgggatgtagtatcaccagcgattctggaagcagtagtctttctgatatctaccaggcc
acagaaagcgaggctggtgatatggacctgagtgggttgccagagactgcagtggattca
gaggatgatgatgatgaagaggatattgagagagcatctgatccattgatgagcagggat
attgtcagagactgcttggagaaggaccctatagacagaacagatgatgacatagaacaa
ctgctggaatttatgcatcagttgccagcttttgccaacatgacaatgtctgtaaggaga
gaactctgtgcagtgatggtatttgcagttgtggagagagcaggaaccattgtgctgaat
gacggagaagagctggattcctggtctgtgattttgaatggctcagtggaagtgacctat
tctgatgggagaacagaaatcctatgtatgggaaatagctttggtgtctctcctaccatg
gagaaggaattcatgaaaggtgtgatgaggaccaaagtggatgattgccagtttgtatgt
attgcccagcaagattactgccgcatcctcaaccaagtggagaagaacatgcagaaggtg
gaggaggagggagagatagtgatggtaaaagaacatagagagcttgatcgcactggaaca
agaaaaggtcacattgtcatcaagggaacttctgaaagattaacgatgcatttggtggaa
gaacactcagtagtagatccaacattcatagaggatttcctgttgacatacaggactttt
ctgtcaagcccaatggcagtgggcaagaagttgctggagtggtttaatgaccctagcctc
agggacaaggttacacgggtagttcttttgtgggtgaacaatcacttcaatgactttgaa
ggtgatcctgctatgactcgctttctagaagagtttgaaaacaatttggaaagagagaaa
atgggtgggcatctgaggttgttgaatattgcctgtgctgctaaagctaagcgccgcttg
ataacactaacaaagccgtcgcgagaagcccctctgcctttcaccttgctgggaggatca
gagaagagctttggtatctttgtggatagtgtggatctcgccagcaaagcaaccgaagca
ggcttgaagcgtggtgatcagatattagaagtcaatggtcagaactttgaaaacattcag
ctgtcaaaagccatggaaatcctgagaaacaacactcacttatccatcactgtgaaaacc
aatttatttgtgtttaaagaacttctgacccgattatcagaggataaaaggaatggtgct
ccccatttgcccaaaattggtgatataaagaaagctagtcgttattctatacccgatctg
gctgtggatgtggaacaagtgatagggcttgaaaaagtgaacaagaaaagcaaagctaac
actgtcggagggagaaacaagctcaagaagatacttgacaaaactcgaatcagtattcta
ccgcagaaaccatacaatgacattggaattggtcagtctcaggatgatagcatcgtaggt
ctgaggcagacaaagcacatacctgcagctctacctgtaagtgggactctatcatctagt
aatcccgatttattgcagtctcatcaccgcatcttggacttcagtaccactccagactta
cctgaccaagttctgcgagttttcaaggcagaccagcaaagccgttacatcatgatcagc
aaggacacaacggccaaggaagtagtcattcaggcaatcagggaatttgctttgactgcc
acacctgaggcatactccttatgtgaagtgtctgtcaccccagaaggagtcatcaaacaa
agaaggcttccagatcagctgtccaagctggcagatagaattcaactcagtggcaggtat
tatctgaaaaataatatggagacagaaacgttgtgttctgatgaagatgctcaggagctt
ctgagagaaagccagcttactctgctgcagctcagcactattgaggtggcaacacagctc
tccatgaggaactttgagctgtttcgcaacattgagcctacagaatacattgatgacctg
ttcaaactgaaatcacagaccagctgtgtaaacctaaaaaagtttgaagatgctattaac
caggagaccttttgggtggcatcagagattctaagagagaccaaccaactaaagaggatg
aaaattatcaaacatttcatcaagatagcactgcactgtagagaatgcaagaatttcaac
tccatgtttgcaattatcagtggtctgaacttggctccagtggcaaggcttcgttctact
tgggaaaaacttcccaacaaatatgaaaagctgtttcaagatctgcaagacctgtttgat
ccatctaggaacatggcaaaatatcgtaatgtcctgaatagtcaaaatcttcagcctcct
ataattcctctgttccctgtcattaagaaggatcttacctttctccatgaaggtaatgac
tcaaaggtggagggattagtaaattttgagaagttgaggatgattgcaaaagaaattcgc
catgttggtcgaatggcttctgttaatatggatcccgcattaatgttcaggacaaggaag
aagaagtggaggagtttggggtctctcagccagggaaatacaaatgcagcagtgctggat
gtggcacagacagggggtcacaaaaagcgggtgcgtcgcagctccttcctcaatgccaag
aaattgtacgaagatgcccagatggcacggaaagtaaagcagtacttgtcaaatttggat
ctagaaatggatgaagagaacctgcaaactctttcactacagtgtgaacctgcaaccaat
acacttcctaaaaatccaggagacaaaaagtgtgggaaatcagagacctctccagggact
ccaagagcaggaacccaacagaaaacccagcagcagcaaccaaaagtcaaccaagcactg
caagtccctgctgtttccctctatccatctcggaaaaaagtaccagtcaaggatcttccc
ccttttggtatcaactctccccaagctttaaagaaaatcctatcattgtctgaagaagga
agtttggagcggcataaaaaacaggcagaagacgcacaatctaatgcatcatcccagctt
tcttctcctcccacttccccgcagagctctccaaggaaaggttatactctggctcctagt
ggcacggtggacaatttttcagattccggtcacagcgagatttcttcacgttctagtatt
gtcagcaattcctcctttgactccatgccaatgtcgctgcatgatgagaggcgacagagg
cattctgtgagcattgtggagacaagccttggcatgggaaggattgatagaagagccaca
atggaaccggatcagtgtagtttaggttcctttacaccaatgttggagaacaggggtttg
tatgcagggacaacagtgctgtcttctcctagcacagaagagctgtctcaggatcaagga
gatcgggcatcactggatgcagcagacagtggccgtggaagttggacttcttgctcaagt
ggttctcatgataacatacagacaatacagcaccagaggagctgggaaactctaccattt
ggtcacattccttttgacgggtcaggggacaattcatctctttgggtttctggcagccac
atggaccagactatgtttcctgattatagcacaaaatatagcaggcaaagtcatggtagg
gaaggctttgatcaagcacaatccagagcaagttgggcatcatcaacaggctactgggga
gaggactcagaaggggatacaggtaccataaagcgaagaggtgggaaggatgttactgca
gaagctgaaaccagtagcataacatctgtgacttcagaagaatccaagccacttcctata
gctgctcacatagttgtatcatcgagcaatgcaaagggtcttattgcacggaaggagggg
agatatcgagagccccctccaacacccccaggttatgtagggatccccattgctgacttc
acagaaggccattcccatccgatccggaaacctccagattacaacatagcattaaaacgg
tcgcgaatgatggcagggaagtgcgagacacaaggaagttcgacaccaccatcgcatcca
gctaacaggccaacaagcaaacctcagtggcataaaccaaatgaatccgactcacgtttt
actcactatcagtcacaaggattttccacagaggatgaggctgaagatgaacaagtctct
gccgtttaa
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integrated database retrieval system
