Geotrypetes seraphini (Gaboon caecilian): 117359231
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Entry
117359231 CDS
T09159
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1
KO
K09364
POU domain transcription factor, class 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117359231 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117359231 (POU2F1)
03021 Transcription machinery [BR:
gsh03021
]
117359231 (POU2F1)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117359231 (POU2F1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117359231 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117359231
NCBI-ProteinID:
XP_033797505
UniProt:
A0A6P8RC98
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All DBs
Position
4:108687979..109176178
Genome browser
AA seq
761 aa
AA seq
DB search
MADGGAASQDESSAADSRMNNPSETSKSSSVESGDGNTGTQTNGLDFQKQPVPIGGAITT
AQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKFKEEAVEHQQPSQPSQQPSMQAAIPQPQ
LMLAGGQITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQQHNATGATISASAATPMTQI
PLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTSLQPAQFIISPTPQGQQGLLQAQNL
LTQLPQQSQANLLQSQPSITLASQPATPTRTIAATPVQPLPQNQSTPKRIDTPNLEEPSD
LEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKP
LLEKWLNDAENLSSDSALSSPSSLNSPGLGVEGLNRRRKKRTSIETNIRVALEKSFLENQ
KPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGASSSSPIKALFPSPTSLVA
AAPNLICSTATALTVNPVLPLTSAAAVTSVSATGTTGTGSTNTATVISTAPLVSSVMTSP
SLSPSPSASASASEASSASDTSTTQTTSTPLTSTLGTSQVMVTASGLQTAATNVLQGAAA
AQLPANASLAAMAAAAGLNPGLMAPSQFAAGGALFSLNPGTLGSALSPALMSNSTLATIQ
ALASGGSLPITSLDATGNLVFANAGGTPNIVTAPLFLNHQNLSLLTSNPVSLVSAAAASA
GATGPIASLHSTSAESIQNSLFTVASTSGAASTTTTASKAQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagcagcagactcaagaatgaac
aatccgtcagaaaccagtaaatcttcttcagtggagagtggtgatgggaacacaggcaca
caaacaaatggcctggactttcagaaacaacctgtgcccattggaggagcaatcactaca
gcccaggcacaagcatttcttggacatctccatcaggtccaactcgctggaacaagttta
caggctgctgctcagtccttaaatgtacagtctaaatttaaagaagaagctgtggagcac
cagcagccaagccagccttcccagcagccttcaatgcaggcagccataccccagccccag
ctcatgctggccggaggacagatcactgggcttaccttgacgccagcccagcaacaattg
ttactacagcaggcacaggcacagctgttggcagcagcagtacagcattctgctagtcag
cagcacaatgccactggagccacaatctcagcctctgcggcaacaccaatgacgcagata
cccctctctcagcctatacagattgcacaggacttgcagcaacttcagcagctccaacag
cagaatcttaacctgcagcagtttgtgttggtgcatccaacaaccagcctgcaaccagcg
cagtttatcatctctccaacaccacaggggcaacagggcctcctgcaagcgcagaatctc
ttaacgcaactacctcagcaaagccaagccaacctcctgcagtctcagccaagcatcacc
ctcgcctcacagccggcaaccccaacacgcacaatagcagcgaccccagttcagccactt
ccacagaaccagtcaacaccaaagcgcatcgacactcctaatttggaggaacccagcgac
cttgaggagctagagcagtttgcaaagactttcaaacaaagacgcattaaacttggattc
actcagggtgatgttgggctcgctatgggcaaactctatggaaatgacttcagccaaact
accatctctcgctttgaagccttgaacctcagctttaaaaatatgtgcaaattaaagcca
cttctggaaaagtggctgaatgatgcagaaaacctctcgtctgactctgctctctccagt
ccaagttcactaaattccccagggctgggggttgaggggctgaaccgcaggaggaagaaa
cgcaccagcattgagactaacatacgagtggccttagagaagagtttcctggagaaccaa
aaacctacctcggaagaaatcaccatgatcgctgaccaactgaacatggaaaaggaggtg
atccgtgtttggttctgtaaccggcgccagaaggagaaaagaatcaacccacctagcagt
ggtgctagcagcagctctcccattaaggcacttttccctagtccaacatcattggtggct
gccgcaccaaaccttatatgtagcacagctaccgcattgacagtaaacccagtgctccct
ttaaccagtgctgctgctgtaaccagcgtctctgctacaggcacaacaggcacaggctct
accaacacggcaactgtgatctccacagcacctctagtttcctcggttatgacatcacca
tctctaagcccttccccttctgcctcagcctccgcctcagaagcatccagtgccagtgat
accagcacaacgcagaccacctccaccccactgacttccacacttgggaccagccaggtg
atggtgacagcatctgggctgcaaacggcggctaccaatgtgctacagggagcagcagcc
gcacagctgcctgcaaatgcaagtctcgctgccatggctgccgcagcggggctcaaccca
ggcctgatggcaccctcgcagtttgcagctggaggtgccttattcagtcttaatccaggg
actcttggcagcgcactcagcccagctctgatgagcaacagcacactagcaactatacaa
gctcttgcatctggtggatctcttccaataacatcactggatgcaactgggaaccttgtc
tttgctaacgctggggggactcccaatattgtgactgccccactgttcctgaatcatcag
aacctttctttgctcaccagcaaccctgttagcctggtctctgcagctgcagcttccgcg
ggggctactggacctatcgccagccttcattccacctcagctgagtccatccagaactct
ctttttacagtggcctccaccagtggggctgcttctaccaccaccactgcctccaaggca
cagtga
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