Geotrypetes seraphini (Gaboon caecilian): 117359257
Help
Entry
117359257 CDS
T09159
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117359257 (SORCS3)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Others
Others
117359257 (SORCS3)
Endosome - Lysosome transport
117359257 (SORCS3)
Endosome - Golgi transport
117359257 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117359257
NCBI-ProteinID:
XP_033797595
UniProt:
A0A6P8QNV5
LinkDB
All DBs
Position
4:299243773..300543300
Genome browser
AA seq
1247 aa
AA seq
DB search
MGRGTVFCLGWRDALLWTWLLLFTSGFGSAEITCRSCHAQVKLLRLPRGSGGREGRFLRE
LLDRPGKSEEDPRREGIQPAPAPAAGDRLPHSGREKGAALLGKTGLAASVRSVGIAGRWE
EDPASGKRKAGAIGAPGRVLREGGSGPPLHRTKRSGAAIGLDHGEEMQPPLGPNMGEPVP
SGSLAEGPKVDRTEGKVSRPRAEEPRLLGTSFALTGDSAHNQAMVHWSGGRNSSVILILT
KLYDFNLGSVTESSLWRSTDYGTTYEKFNEKVGLKTVLSYLYVSPTNKKKIMLLSDPEIE
SSILISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSLDQKLYSSMDFGRRWQLVHER
ITPNRFYWSVTGLDKESDLVHMEARTTDGQAHYLTCRIQECSETTRSGPFSRAIDISSLV
VQDEYIFIQVTAGGRATYYVSYRREVFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQ
NETYNLYISDTRGVYFTLALENVKSSRGLEGNINIDLYEVAGIKGIFLANKKVDDQIKTF
ITYNKGRDWRLLQAPSADLRGNSIHCLLPFCSLHLHLQMSENPYTSGSISSKDTAPWLIV
ATGNIGTELSYTDPSMFISSDGGNTWRQIFEEEYNVWYLDWGGALVAMKHTSMPIRHLWL
SFDEGRSWNRYGFTSAPLFVDGALVDPGVETQIMTVFGHFSLRSEWQLVKVDYKSIFGRR
CNENDFLMWHLHNQGELCVMGERKTYKKRRPGSQCALGRDYSRVIISEPCLCADWDFECD
YGFERHGSNQCSPAFWYNPASPSRDCSLGQSYLKSTGYRKIVTNNCTDGLREQYSAKPQQ
CLGKAPHGLQLTTSNSKLAADLGNNVTFLVHLEEGDLQRTAIQLDFGDGIAVSYANFSQV
EDGVKHVYKNTGIFQVVAHAENSVGSDTAVLFLHVICPVEHIHLSIPFVAIKNKEINITA
VVWPNQSGTLTYFWWFGNSTKPLITLDCSIAFTFSTEGMNTITVQVSAGNVLIQDTKEIA
VYEYFQSQLLSFSPNLDYHNPDIPEWREDIGRIIKRSLVQVTSIPDELILVAMFPGLPTS
AELFILPHKNMTERRKRNEAHLEQIIQVLFNALNQNLVQFELKPGVQVFVYVTQLTLAPL
VDSSTGHSSSAMLMLLSVVFVGLAGFLIYKFKRKIPWLNIYAQVQHDKEQEMIGSVSQSE
NTSKITLGDFTDPEELLDKELDTRVTGGIATVTNSESTKEIPNCTSV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggggcgagggactgtcttctgtttaggctggcgggacgcgctcctctggacctggctt
ttgctcttcacttctggatttggcagcgctgaaataacttgccgatcttgtcatgcccag
gttaaactgctgcggttgccaaggggcagcggaggaagggaggggagattcctgagggaa
cttctggatcgccctgggaagagtgaagaagaccctcggcgtgaagggatccagcccgcc
ccggctccagcggcgggagatcggctcccgcattccggcagagagaagggcgccgccctg
ctgggcaaaactgggcttgcagcttctgtccgctccgtcggaatagccgggcggtgggag
gaagaccctgcctctggcaaaaggaaagccggggcgattggggctcctggaagggtcctc
agggagggagggagcgggccccccctgcacaggacgaaaaggagcggggcagccatcgga
ctagaccacggcgaggaaatgcagcccccccttggcccaaacatgggagagcccgtcccg
agcggatccttagcggaaggaccgaaagtagaccgcactgaagggaaagtgagccggccg
cgggcggaagagccgaggctgctcggcacctcctttgcactgaccggggactcggctcac
aaccaagccatggtgcactggtcagggggacgcaacagcagtgtgattctcatcctgaca
aagctgtacgacttcaacttagggagcgtcactgaaagctcgctttggaggtcaactgat
tatggcaccacatatgaaaagttcaatgaaaaagttggattgaaaactgtgctaagttac
ctctatgtcagccccacgaacaaaaagaagataatgctcctcagtgacccagagatcgaa
agcagcatcttgatcagctcggatgaaggggccacttaccaaaagtaccgactgaatttt
tatatccagagcctgctctttcaccctaaacaggaagactggatattagcatacagcctt
gatcaaaagttatatagttccatggactttggaagaagatggcaattggtacatgaacga
atcactccaaataggttctattggtcagtgacaggtttagataaagaatcagatcttgtg
cacatggaggccagaactaccgacggacaagcccattatttaacctgcagaattcaggag
tgttctgagactacaaggagtggacccttttctcgcgcaattgacataagctctttggtt
gtccaggacgaatatatcttcattcaggtgactgctggagggagagcaacttactatgtg
tcctacagaagggaagtttttgctcaaataaaattgcccaaatattcactgccaaaggat
atgcatattatcagtacagatgagaaccaggtatttgctgcagttcaagagtggaaccaa
aacgaaacctacaatctttacatatccgatactcgaggagtctacttcacactggctttg
gagaatgtcaaaagtagccgaggccttgaggggaacatcaacattgacctttatgaggta
gcagggataaaaggaatatttctggctaacaagaaggtggatgatcaaataaagactttt
atcacttataataaaggccgtgactggcgcttgctgcaggctcccagtgccgatcttcga
ggaaattccatccattgtctactgcctttctgttccctgcacttacacttgcagatgtcg
gagaatccttacacgtcagggagcatctcaagtaaggacactgctccctggctgatcgtg
gcaacaggaaacattggtactgagctgtcatacactgatcccagtatgttcatctcatca
gacggaggaaacacctggaggcagatcttcgaagaagagtacaacgtttggtatctagac
tggggtggagcccttgtagccatgaaacatacctcaatgcccatcaggcatttgtggcta
agctttgacgaaggaaggtcctggaataggtacggctttacttcagcacctctttttgta
gatggagccctggtggatccaggtgtggagacacagatcatgacagtatttggacacttc
agcctccgttcagaatggcagctagtgaaagttgactacaaatccatctttggaaggagg
tgcaacgagaatgactttctgatgtggcatttgcacaatcagggagagctttgcgtcatg
ggggaaagaaaaacatataagaagcgccggcccggatcccagtgtgcactgggaagagat
tactctagagtcataatatcagagccttgtctctgtgctgactgggattttgaatgcgac
tatggatttgaaaggcatggcagcaaccagtgtagtcctgctttctggtataatccagcc
tcaccgtccagggactgcagcctgggtcagagttatctgaagagcacaggatataggaaa
attgtgaccaataactgcacagatggcctgagagaacagtattcagcaaagcctcagcag
tgtctcggcaaggctccccatgggctccaacttaccaccagcaacagcaaactggcagca
gacctaggaaacaatgtcacattccttgttcatttggaagagggtgatctccagaggaca
gccatccagcttgattttggagacgggattgcggtatcctatgcaaatttcagtcaggta
gaggatggcgtgaagcacgtgtacaagaacactggcatattccaagtggtggctcacgca
gagaacagcgtgggctctgacactgccgtcctcttcctccatgtgatctgtcctgtggaa
cacatccatctgagtattccattcgttgccattaaaaataaggaaattaatatcactgcg
gttgtttggcctaatcagtcagggacgctcacttacttttggtggtttgggaacagtact
aagcccttaatcaccttggactgtagtattgctttcactttcagtaccgagggaatgaat
accattacagtccaagtatctgctgggaatgtccttatccaagacaccaaagagattgcc
gtctacgaatatttccagtctcagctgttgtcattttctcctaacctggattatcataat
cctgacatccccgagtggagggaagacatcggcagaatcatcaaacgatccctggtacag
gttactagtattcccgatgagctgattttagtggccatgtttcctggcttgccaacctca
gcagagcttttcattcttccccataaaaacatgactgaaagaaggaaaagaaatgaagca
cacttagaacagattattcaagtcctctttaatgctctaaatcagaacctggtacagttt
gagctgaagccgggtgttcaagtctttgtatatgtcactcagctgacgttagcgccgttg
gtagattccagcacagggcacagcagttctgccatgctaatgcttttgtctgtggtattt
gttggcttggctggatttttaatctataaatttaaaaggaaaatcccttggctaaacatc
tatgcccaagtccagcatgataaggaacaggaaatgattggatctgtcagccaaagtgaa
aatacttccaaaatcacacttggtgatttcacagatcctgaagagcttttagacaaagaa
ctggacacacgggttacaggaggcattgccacagtgacgaacagtgaaagcacaaaagag
atcccaaactgcactagcgtttaa
DBGET
integrated database retrieval system
