Geotrypetes seraphini (Gaboon caecilian): 117359378
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Entry
117359378 CDS
T09159
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117359378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
117359378
Domain-containing proteins not elsewhere classified [BR:
gsh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117359378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
117359378
NCBI-ProteinID:
XP_033797922
UniProt:
A0A6P8QG38
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All DBs
Position
4:209052846..209176245
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AA seq
498 aa
AA seq
DB search
MDDNIGKTKPVASGVYSIKVGTETSQREASYTTTTQKVVKSQAPLISSSNQSTPVEHAPV
STSYASASMSPASANQFIAPAQQAANQTVTPPAATASAPASLPSSFQRAHTAPSTAFPGS
KNMSMAASTITSALSAQSRPIFTKSPEPSSVLDALHITPIFTTWPVLKKRTVSKRTGAIS
LPRKVNLSHFGQAHTPASAPHGYGEAPHTAPKPRVVTTASIKPSVYHPGQAPAHVPVEQE
PTSRPPWVTDDAFSQKYAPSKTTTSVTKHVLPKGAPPAPHPISTAAHPISTAAPPSHPGP
AMPRGLIQRAERFPASTRTPLCGHCNSVIRGPFLVAMGRSWHPEEFYCANCKTSLADVSF
VEEQNNVYCERCYGQHFAPTCAKCHTKIMGEVMHALRQTWHTTCFVCAACRKPFGNSLFH
MEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCNVNLEGQPF
YSKKDKPLCKKHAHAVNI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaacattggcaaaactaagccagtagcctccggagtttactccataaaggtg
gggacggagacaagtcagagggaagccagttataccactactactcagaaagtggttaaa
tcccaggcccctcttatctcatccagtaatcaaagtacccctgttgagcatgctccagtg
tctaccagctatgcctctgcttctatgtcgcctgcttcagccaatcagtttattgctcct
gctcagcaagcagccaatcagacggtgacgccaccagctgcaaccgcttcagcacctgct
tccttgccatcctctttccaaagagcacatacagcacccagcactgctttccctggatcc
aagaatatgtccatggcagcttccactattacttctgctctttctgctcagtctagaccc
atatttactaagtcacctgagccttcgtctgttttggatgcacttcatattacacctata
ttcactacttggccagtccttaagaagagaacggtttccaaaagaactggtgccatttct
cttccaagaaaagtaaatctgagccattttggacaggcccacacaccagcttctgctcct
catggctacggtgaagctccacacactgctcctaaacccagagtggtcaccactgccagc
ataaagccctctgtttaccacccaggccaagctccagctcacgttcctgtcgaacaagag
cccaccagccgtcctccttgggtaactgatgatgccttctcccaaaagtatgcacccagc
aagaccaccacctcggtaacaaagcacgttctaccaaagggtgctccaccggcgccacat
cccatttcaacagcggcacatcccatttcaacagcggcacccccctctcatcctggaccc
gcaatgccccgtggcctcattcaaagagctgagcgcttccctgctagcaccaggactccc
ctgtgtggccactgcaacagcgtcattcgaggtcccttcctggtggctatgggtcgctct
tggcacccagaggaattctactgtgccaactgcaagacctcgctggctgatgtgagcttt
gtggaggagcagaacaatgtgtactgtgaacgttgctatggacagcattttgctccaaca
tgtgcgaaatgccacaccaagatcatgggggaagtgatgcatgccttgaggcagacttgg
cacaccacctgctttgtctgtgccgcctgcaggaaaccctttggtaacagcctcttccac
atggaggatggtgagccctactgtgagaaagactacgttgcactcttcagcaccaaatgc
catggctgtgatttcccagtggaggcaggagacaagttcatcgaggctcttggacacact
tggcacgacacctgcttcatctgtgcagtatgcaacgtgaatctagaaggtcagcccttt
tattcgaagaaagataaacctctgtgcaagaagcatgcccacgctgtcaatatctaa
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