Geotrypetes seraphini (Gaboon caecilian): 117359387
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Entry
117359387 CDS
T09159
Symbol
FAM160B1
Name
(RefSeq) protein FAM160B1
KO
K26421
FHF complex subunit HOOK interacting protein 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117359387 (FAM160B1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gsh04812
]
117359387 (FAM160B1)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
117359387 (FAM160B1)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
117359387 (FAM160B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
117359387
NCBI-ProteinID:
XP_033797958
UniProt:
A0A6P8RAR7
LinkDB
All DBs
Position
4:313141171..313260062
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AA seq
757 aa
AA seq
DB search
MFSKLTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML
DILVQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLIFYTKLLGRIRQ
PLLPHINVHRPVQKLIRLCGEVLANPTENEEIQFLCIVCAKLKQDPYLVNFFLESKLRGP
AFKGPSDLPLGDSSRNARPLTADSEQTEGVCGAGKAEQTEENRLSSSADDLPPSMYSGEL
TTPIGASAKYTNQDYNLVNSLLNLTKSPDGRIAVKACEGLMLLVSLPELAAAKCLVQNTC
LCELLTDRLTSLYKALAQSVDPLDIETVEAINWGLDSYSHKEDASAFPGKRALISFLSWF
DYCDQLIKEAHKTSADVMARAIREQFFTRVMEPQLMQTSEIGILTSTALLHRIVRQVTSE
ALLQEIADFILGADREAETPRDINKHPLRHRLIEHCDHISDEISIMTLRLFEHLLQKPCE
HVLSNLVLRNLEERSYTEYKPMSQDDKDVVENGQIAGAVDLEEDPLFTDNIIPSPEWLTA
SPPTTPEHPKMDGKTEVHKIVNSFLCLVPDEAKSSYQVEGTGYDTYLRDAHRQFRDYCAI
CMRWEWPNSPKVLEKCNLTTPFFEGHFLKVLFDRMGRILDQPYDVNLQVTSVLSKLALFP
HPHIHEYLLDPYVNLAPSCRSLFSVIVRVVGDLMVRIQRIPDFTPKLLLVRKRLLGLEPE
GPIIDHMTLLEGVIVLEEFCKELAAIAFVKYHASTIP
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaagctcacctccatcctgcagcatgccgtggaggcgcttgccccttcgctt
cctttacaagaagactttgtatatcactggaaggcaatcactcattattacatagaaact
tcagatgataaagctccagtgactgacacaaacatcccttctcatctggaacagatgttg
gatattttggtacaagaggagaatgagagggagtcaggcgagactggtccctgcatggaa
tatttactccatcataaaatcctggagacactctacacattaggaaaagctgattgtcct
ccaggaatgaagcaacaggttctgattttttataccaaactcttaggaagaattcggcag
ccccttctgccgcatatcaacgtccacagaccagtgcagaaactaatccgactctgcggg
gaagtcttggctaacccgacagaaaatgaagaaattcagtttctctgtatagtgtgtgcg
aagctgaaacaggacccttacctcgtcaacttcttccttgagagcaaactgaggggtcca
gcgttcaaaggcccttcagacctacctctgggagattcatcgaggaacgcgaggcccttg
acagcagattcagagcagactgaaggagtttgtggtgctggtaaggcggagcaaacggaa
gagaatcgcctttcttcatcggctgatgatctgcctccatcaatgtactcaggagaattg
acgacacccattggggcttcagccaagtatacaaaccaagactacaacctggtgaactcc
ttgctgaatctcaccaaaagtccggatggtcggatagctgtgaaggcatgtgagggtttg
atgcttttggttagtctgccggagttggcggcagccaagtgcttggtccagaatacatgc
ttgtgtgaactgctgacagacaggctcacctcactctataaggccctggctcagtctgtg
gatcctttggatatagaaacagtggaagcaattaactggggtctggattcatacagtcat
aaagaagatgcatctgcttttcctggcaagcgggccttgatctcatttctgtcttggttt
gattattgtgatcagctcatcaaagaagcgcacaagacctctgctgatgtgatggcaaga
gctattcgagagcagttcttcaccagagtcatggagccccagctaatgcaaacgtcagag
attgggattcttacatcgacggcccttctgcatcggattgtccgtcaggtgacttcagag
gctctgctgcaagaaattgctgacttcattctgggagcagatcgggaggcggaaaccccg
agagatatcaacaagcatccacttcggcacagactgatagagcactgtgatcatatttca
gatgagattagcataatgacgctcagactgtttgagcatcttttacaaaagccctgtgaa
catgttctctctaacctggtcttgaggaatttggaggaaagaagctacactgaatataaa
cccatgtcccaggatgataaagatgttgtggaaaatggacagatagctggggcagtagat
ctggaagaagatccattgtttactgacaacataataccaagtccagaatggctcactgct
tctccacctactacaccagaacaccctaaaatggatggcaagaccgaggtccacaaaatc
gtgaacagttttttgtgtttagtgcctgatgaagcaaaatcctcatatcaagtagaagga
acgggttatgacacatacctcagagatgcccacagacagttccgagactactgtgctatc
tgtatgcgctgggaatggcccaattctccaaaggttttggaaaagtgcaatttgacaacg
cctttctttgagggtcacttcttgaaagttttgtttgaccgaatgggcaggattctggac
cagccctatgatgtgaatttacaagtgacatctgtgctgtccaagttggctctctttccc
catccacatatacatgaatacctcctggatccttatgtcaatctggctccaagttgcaga
tctctcttctccgttattgtcagggtagtgggagatctgatggtgagaatccaacgcatc
ccggattttactcctaagcttttgctagtgagaaagcgtctgctgggattggagcctgag
gggcccataattgaccacatgaccctgctggagggtgtgattgttttggaagagttctgc
aaggagctagcagccatcgcgtttgtcaagtaccacgcctcgaccattccgtga
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