Geotrypetes seraphini (Gaboon caecilian): 117359394
Help
Entry
117359394 CDS
T09159
Symbol
ATXN1L
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117359394 (ATXN1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Ig_NUP210_1st
Motif
Other DBs
NCBI-GeneID:
117359394
NCBI-ProteinID:
XP_033797985
UniProt:
A0A6P8QQ44
LinkDB
All DBs
Position
4:1621532..1689728
Genome browser
AA seq
660 aa
AA seq
DB search
MKPVHERNQECLPPKKRDLPQSCTNYEHAVTSSCSPSASSASAEAPDLLITAGPSDVGLR
CSVASENCEERASVTLDQYGYLYNMAVPPAVVSMSSLPSAIIQHPAIPFPSIHCTPVSPT
SVQYIGSPYALPCAVTPSFLSGSLMSSSHIPHYVPYGSLTGSASSNPSSGNTFKKAQSAS
LSTTSSPSQLQPHAGALPVEIAHGICYHHSSCVPSVYSVHEVPLTCSGSGTVPAVQNMRK
RGNLVTVATSEELECNQGRMRNQILDLHNQLTDVGLHGAAGEHRTDGQLFSDYQTSRVEI
AIPAHRDTPDTDLEVERVVSGLNCQSPVTLSHIVSEPQNELRNVSSPAVQRNPTEAAIER
GQLDSLYLASSLQEVAHTHFHKPVAVSNGESEQGLVSASAKLVSDGEGDLVMKNSFVFAT
APMQSVSVQPPNSSRMPSHFMKGAIIQLATGELKRVEDLQTQDFVQSAELSGGLKIDSST
VVDIQESQWPGLVTLHFVVGEQQSKVSLDVPPEHPFFVYGQGWSSCSPGQTTRVFALPCH
RLQVGDVCISISLQSLNDNLASPAGCFLPSQPLSPKGRKSPCPRQQMLLTEKCKQIKNLS
SQSSHIGSPDPETSGHYCWSSPGFQRYSLQVENMQPSPLRASFIPQEVKLSIEGRSNAGK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgtccatgagagaaaccaggaatgccttccaccaaagaaacgagatcttcct
cagagctgcacaaattacgagcatgcagtgacgagcagttgctctccttccgccagctca
gcctcagctgaagcccccgacttgctcataacagccgggccaagtgacgtgggcttgcga
tgcagtgttgccagtgagaactgcgaggaacgtgctagtgtgactttagatcagtatggc
tatctctacaacatggcggtgccaccagctgtagtaagcatgagttcacttccttctgca
ataatccaacaccctgcaattccttttccatctatccactgtactccagtgtcacctacc
tcggtgcagtatataggatccccttatgcactgccatgtgcagtaactcccagcttcctg
tctggttctcttatgtcctcttcacacatccctcattatgtgccatatggatcactaacc
ggctctgcctcatcaaatccctcttcaggcaacacattcaagaaagcccaaagtgcatcc
cttagtaccacctcttctccaagccagctgcagccccatgcaggagcccttccagtggag
attgctcatggcatttgttatcatcactcgtcatgcgtgccatcagtgtattctgtacat
gaggtaccactcacatgttcaggatctggcacagttccagcagtccaaaatatgaggaaa
agaggaaacttagttacagttgccaccagtgaagagctggaatgtaatcagggaaggatg
agaaaccagattttagacttacacaaccagctgactgatgttggattgcatggtgctgca
ggagagcacaggacagatggacagctcttttcagactatcaaacatcaagggttgagatc
gctatcccagcacacagagacactccagatacagacctagaggtggagagagtggttagt
ggtttgaattgtcagagtcctgtgaccctttcccacattgtttctgaaccccagaatgag
ctcagaaatgtctcatccccagctgtgcagagaaatcctacagaagctgctatagagaga
ggccagctggatagtctgtatctggcatcatccttacaggaagttgcacatacacacttc
cacaaaccagtagcagtatccaatggggagtcagaacagggtttagtttctgcaagtgct
aagttggtttcagatggtgaaggggatcttgtaatgaagaactcctttgtttttgcaact
gcacctatgcagtcggtctcagtccagcctcccaattcctctcgcatgccctcccacttc
atgaaaggagccatcattcagctggccactggggaactaaaacgggtggaggacctacag
actcaggattttgtgcaaagtgctgaactaagtgggggtctcaaaatagactccagcact
gtggtggacatccaggagagccagtggcctgggcttgtcaccctgcattttgtagtgggc
gagcagcagagtaaggtttccctggatgtgcctcctgagcaccctttctttgtgtatggg
cagggctggtcttcctgtagtcctggtcaaacaacgcgagtctttgcactaccttgtcac
agactgcaagtgggtgatgtgtgtatctctattagtttacaaagcctgaatgataactta
gcctcgcctgctggatgtttccttcctagccaaccgctatccccaaaaggcaggaagagt
ccatgtccgagacagcagatgctcttgacagaaaaatgtaagcaaataaagaacctttca
tcacagagttctcacatagggtccccagatccagaaactagtggacattactgctggtca
agccccggattccaaagatacagtttgcaggttgagaatatgcaaccttccccacttcgc
gcctcattcattccccaggaggtcaagttgtctattgaagggcgctccaatgctggaaag
tga
DBGET
integrated database retrieval system
