Geotrypetes seraphini (Gaboon caecilian): 117359415
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Entry
117359415 CDS
T09159
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117359415 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117359415 (SH3RF1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117359415 (SH3RF1)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117359415 (SH3RF1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117359415 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
117359415
NCBI-ProteinID:
XP_033798044
UniProt:
A0A6P8QQC3
LinkDB
All DBs
Position
1:complement(178721063..178959881)
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AA seq
880 aa
AA seq
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MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRSELRCPECRTLVDCGV
DELPSNILLVRLLDGIRQRPRKAGTGSSLTNALRAQSGTTAICGTKDPQSSQSGLQQRAQ
ARSPPVRGVPQLPCAKALYNYEGKEAGDLKFSKGDVIILRRQVDENWYHGEISGIHGFFP
TNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDVLTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAAKQLIELDKPSGSGLDSGEGTSGAAYSNSTQKHTDTKKNTKKRHS
FTSLTMSNKSSQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHISTTGL
IVTPPPSSPVITGPSFTFPPEVTYQAALGDMNPPLPPLPMTAALMASTSSGSTSSGAGQR
PVSGSGDQISHLRQQTRPSVYVAIYPYSPRKEDELELRKGEMFLVFERCQDGWFKGTSMH
TNKIGVFPGNYVASVTRSVTNASQVKIPVTTASQSGPMVTMVSPSSAGTTSQKLQGNGID
FNKVLNSNGVPTGTIPSAHIQTSPQSKILMHMSNQMTVNQARNAVRTASVHSQERPLAAV
TPIQAQHATCLLPATLVIPHHSAPSQQLQPQLSASITYLTTPVNINRSNVPSACGTASGN
CPSLAAASLDGDASWRPIPGYTGAPASPETAVSIGNPGAVKLDKDSKKEKKGLLKLLSGA
STKRKPRVSPPQSPTLEVEQAALEIALQGAIGPEIPAAVSHGRAGSCPVDGEVLPAVATS
ALMQEALHRKSGSLDSNVPIAPPPRQPCSSLGPVLNESRPVICERYRVVVSYPPQSEAEL
ELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatctgctttgttggatctcttggaatgccctgtttgcttggagcgtctggat
gcttccgcaaaagtcttaccctgccagcataccttctgcaagagatgtctgctgggcatt
gtgagctcacgaagtgagcttcggtgtccagaatgtagaactttggtagactgtggcgtg
gatgaacttcccagtaatattctactggttaggctactggatggcatcagacagagacca
cggaaagcaggcactggaagtagcttgacaaacgcattgagggctcagagtggaactaca
gcgatctgtggtacaaaagatcctcagagttctcaaagtggactgcagcagcgtgcgcaa
gcacggagccccccagtaaggggtgtacctcagttaccttgtgccaaagcactctacaac
tacgagggaaaagaggctggagatttgaaattcagcaagggtgatgtcatcattttacgt
cggcaggttgacgagaattggtatcatggtgaaatcagtggcatccatggctttttccct
actaattttgttcagattattaaacccttacctcaacctccacctcagtgcaaagcactt
tatgactttgaagtgaaagataaggaagctgacaaagactgtttaccattttcaaaggat
gatgttttgacagtgatccgccgggtggatgagaactgggctgaaggaatgctgggggac
aaaataggaatattcccaatttcctatgtggagttcaattcagcagccaaacagttgata
gagctggacaagccctcaggttctgggttggactctggagaaggtacctcaggggcagcc
tacagcaattcaacccaaaagcacactgatactaagaagaacaccaaaaaacggcactcc
tttacctcccttaccatgtctaataagtcctcacaatcttctcaaaatcggcactccatg
gaaattagtcctcctgttctcatcagttccagtaaccccactgcggcagctcgtataagt
gagttgactggtctgtcttgcagtgctccttctcaggttcatatcagcactacaggactt
attgtgactccacctcccagtagccctgttataactggaccttcatttacttttccacca
gaagtcacctaccaagctgccctcggagacatgaatccccctcttcctcctctgcctatg
actgctgcattgatggcctccacatcatccggaagcacttcttcaggagcaggacaaagg
cctgtgtctggatctggtgaccaaatatcacatttacggcaacaaactcgaccaagtgtg
tatgttgctatttatccttattctccccgaaaggaagatgaactggaactgcgaaaagga
gagatgttcttggtatttgaacgctgtcaggatggctggtttaaaggaacttccatgcac
acaaacaaaattggtgtgtttcctggcaattatgtagcatcagtcacacggtcagtgaca
aatgccagtcaagtgaaaattcctgtgactactgctagccagtctgggccaatggtgacc
atggtcagtccttctagtgctggaacaacctcccagaaacttcagggcaatggcattgac
tttaataaggtgttaaactccaatggggtaccaaccggtacaattccatcagcacacatt
caaacgagcccacaatccaagattcttatgcacatgagtaatcaaatgacggtaaaccag
gcacgcaatgctgtcagaacagcatcagtacatagccaagagagacccttggcagcagtg
actcctatccaggctcagcatgcaacctgtcttttacctgccactcttgtcatcccacat
cattctgccccttctcagcagctgcagcctcagctctctgcatctattacttatttgaca
actcctgtgaatatcaacagatcaaatgtgccatcggcttgtggaacagcttctggaaat
tgtcccagccttgctgcagcatctttagatggagatgcaagttggagacctatccctggc
tatactggagcccctgcttctcctgaaacagctgtatcaattgggaatcctggagctgta
aaactggacaaagacagtaagaaagaaaagaaaggactgctgaaacttctctctggagcc
tctactaaacgaaagcctcgggtttcacctccacagtcccctactctagaggttgagcaa
gctgctttagagatagccttgcagggtgccataggtcccgagatcccagctgctgtgagc
catggaagagctggatcctgcccagtggacggtgaggtcttgcctgccgtggccacatct
gcattaatgcaagaggcacttcatcggaagtcaggttctttggattccaatgttccaata
gctcctcctccaaggcagccttgctcgtctttgggaccagtattgaatgaatccagacct
gtgatttgtgaaagatacagggtggtggtatcctatcctccccagagtgaagcagaattg
gaactgaaggaaggagacattgtttttgttcacaagaaacgtgaggatggctggttcaaa
ggcacattacagagaaatggaaaaaccgggctttttcctggaagctttgttgagaacctc
tga
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