Geotrypetes seraphini (Gaboon caecilian): 117359447
Help
Entry
117359447 CDS
T09159
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117359447 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117359447 (U2AF1)
Spliceosome [BR:
gsh03041
]
Complex A
U2 snRNP components
U2 related factors
117359447 (U2AF1)
Complex B
117359447 (U2AF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117359447
NCBI-ProteinID:
XP_033798132
UniProt:
A0A6P8QGU4
LinkDB
All DBs
Position
4:134343359..134743497
Genome browser
AA seq
278 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNTAQ
TADGSHLISSGPMQSTDHCPLEHFTVTLKNSSQSADGLRCAVSDVEMQEHYDEFFEEVFT
EMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNRWFNGQPILAELSPV
TDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR
DRGRGGGGGGGGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatttggcctccatcttcggcacagagaaagacaaagtcaactgttcattt
tattttaaaattggagcttgtcgtcatggagaccgatgctctcgattgcacaataaaccc
acatttagtcagaccatcttgattcaaaacatctatcgtaatccccaaaatactgcacag
acggccgacggctcacacttgatatcttctggtcccatgcaaagcactgaccattgccct
cttgaacattttaccgtaaccctcaaaaactcttcccagtctgccgacggtttgcgctgt
gcagtaagtgatgtggagatgcaagagcactatgatgagttctttgaggaggttttcaca
gaaatggaagagaaatatggtgaagttgaagagatgaatgtttgtgataatcttggtgat
catctagtgggaaacgtatatgtaaagttccgccgcgaggaagatgctgagaaggctgta
atggacctaaataaccggtggttcaatgggcaaccaatccttgctgaactctcacctgtt
actgacttccgagaagcttgttgccgtcaatatgaaatgggggaatgcacgcgaggcggg
ttctgtaactttatgcatctgaaacctatttcgagggagttgcgccgtgagttgtatgga
cgtcgtcgcaagaagcatcgctccaggtcaagatcccgtgaacgtcgctccaggtccaga
gatcgtggccgaggaggtggaggtggaggtggaggaggaggaggcggtggaggaggtggt
ggacgggaacgtgataggaggagatcacgagatcgagaacgatcgggtcgattctaa
DBGET
integrated database retrieval system
