Geotrypetes seraphini (Gaboon caecilian): 117359506
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Entry
117359506 CDS
T09159
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04110
Cell cycle
gsh04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117359506 (SMC3)
04114 Oocyte meiosis
117359506 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117359506 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gsh00535
]
117359506 (SMC3)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117359506 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
117359506 (SMC3)
Proteoglycans [BR:
gsh00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117359506 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
Tropomyosin
AAA_29
Muted
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117359506
NCBI-ProteinID:
XP_033798305
UniProt:
A0A6P8QQX9
LinkDB
All DBs
Position
4:305137685..305290729
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETSGEKSRQLRDAQQDARDKMEDIERQVREMKAKISAMKEEREQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEES
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYTKLDQDLSEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGVNQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNLRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDSRKSRLELQKDVRKVEEELDELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTYMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRLLQQDNRQLLNERIKLEGTITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRLKDTLSRSEDLDNSIDKTEAEIKDLQKS
MDRWKSTEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDIEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggtgatcattcaaggttttcgaagctatagagatcagactattgta
gatcctttcagttccaaacataacgtcattgtgggcagaaatggatctggaaaaagtaac
tttttctatgcaattcagtttgtcctcagtgatgaatttagtcatcttcgcccagagcag
agattggctttgctgcatgaaggaacaggccctcgtgttatttctgcttttgtggaaatt
atatttgacaactctgacaacagattgccgattgacaaagaggaagtttctcttcgcaga
gtcattggagctaaaaaagaccagtatttcttggacaagaaaatggtgacaaagaatgat
gtaatgaatcttcttgaaagtgctggcttttcacgcagtaatccttattatatcgtcaaa
caaggaaagatcaatcagatggccacagctcctgattcacaaaggctgaaactgttaaga
gaagttgctggaaccagagtgtatgatgaacgcaaagaagagagtatctccttgatgaaa
gaaacagagggaaagagagaaaaaatcaacgaattgctgaaatacattgaagagcgattg
catactctggaggaggagaaagaagaacttgctcagtaccaaaaatgggataaaatgaga
agagccctggaatatacaatatataatcaggaactcaatgagacgcgtgccaagcttgat
gagctctcttcaaagcgtgagaccagtggagagaaatcaaggcaattgagagatgctcag
caggatgcaagagataaaatggaggatattgagcgacaggttcgagagatgaaagcaaag
atctctgccatgaaggaagagagagaacaactaagctctgagagacaagagcagattaaa
cagcggaccaagttagagctgaaagccaaagacttacaggatgaattggctggaaacagc
gagcagaggaaacgtttgctaaaggaaagacagaagcttctagaaaaaattgaagaaaag
cagaaagaactggcggaaacagaacccaaatttaacagtgtgaaggagaaagaagagagt
ggaattgcgagattagctcaagctacacaggaaagaacagacttgtacgctaaacaaggc
cggggcagccagtttacatccaaagaggaacgagacaaatggattaaaaaggagctcaag
tccctagatcaagctattaatgataagaaaaggcagattgcagccatacacaaagattta
gaagatacagaagcaaataaggagaagaatttggagcagtatacaaaactggaccaagat
ctcagtgaagtaaagactcgtgtggaagaactggacaaaaaatattatgaagtgaaaaac
agaaaagatgaactgcagagtgaaagaaattatttatggagagaggagaatgctgagcag
caagctcttgctgcaaagcgagaagatttagaaaagaagcaacagctccttcgagcagca
acaggaaaagctattttaaatggtattgacagcataaacaaagtactggaacactttcga
cgaaaaggtgttaaccagcatgttatcaatggttatcatgggattgtgatgaataacttt
gaatgtgagccagctttctacacttgtgttgaagttactgctggaaacaggttattttat
catattgtggattctgatgaggtcagcaccaagattttaatggagttcaataaaatgaat
ttgcctggagaagtaacatttctgcctctcaacaaactggatgttagagatacagcttat
ccagagaccaatgatgctattcccatgatcagcaaattgaggtataatctaagatttgac
aaagccttcaaacatgtttttgggaagacacttatttgtcgaagtatggaggtatctacc
cagttagccagagctttcacaatggactgtattactttagaaggtgatcaggtcagccac
cgtggggctctaaccggaggttattatgacagcaggaaatctcgccttgaattgcagaaa
gatgttagaaaggtagaagaagaacttgatgaacttgaagccaaactcaacgagaatctg
cgcagaaatattgaaaggatcaataatgaaattgatcaactaatgaatcaaatgcaacag
attgagacacagcaaaggaaatttaaggcttcaagggacagcatcttatcagagatgaaa
atgctgaaagagaagagacaacagtctgaaaaaacttatatgcccaagcaacgtagcttg
cagagtttagaggcaagtttgcatgccatggagtcaactcgtgaatctctgaaagcagaa
ctgggaacagatcttctgtcacagttgagcttagaagatcagaagagagttgatgcactc
aatgatgagattcgcttgctacagcaagacaacagacagctactgaatgaaagaattaaa
ctggaaggtactattacacgagtagagacatatcttaatgagaacctgaggaaacgcctg
gaccaagtggaacaggagttgaatgaactgcgagaaactgagggaggtactgttctcact
gctaccacatcagaactcgaagccatcaacaaaagattaaaagacaccttgtcacggtct
gaagatctggacaactctattgacaaaacggaggcagaaatcaaggatctgcaaaaaagt
atggatcgttggaagagcacggaaaaagagcatatggatgccatcaatcatgacacaaaa
gagctagagaagatgaccaatcggcaaggcatgcttctcaagaagaaagaggaatgtatg
aagaaaatacgagaactgggttcacttccacaggaagcatttgaaaaatatcagactctc
agtttaaaacagttgttccggaaattggaacagtgcaacacagagttaaagaagtacagt
catgtcaataagaaagctttagatcagtttgtgaatttctcagaacaaaaagagaaactg
ataaagcgtcaggaggaattggaccgggggtacaagtccatcatggagctaatgaatgtt
ctggaacttcgaaagtatgaggctatacagctcaccttcaagcaggtatcaaagaatttc
agtgaggtcttccagaagctggtgcctggtggcaaagccacactagttatgaagaaagga
gacattgagggaagtcagtctcaagacgagggagaaggcagcactgaaagcgagagaggg
tctggatcgcagagtagtgtcccatctgtggaccagttcactggagttggaattagggta
tcatttaccggaaaacaaggtgaaatgagggaaatgcagcagctgtcaggtggacaaaaa
tctttagtggctcttgctctcatttttgcaattcagaaatgtgatccagctcccttttat
ctattcgatgaaattgaccaagccctggatgcccaacacagaaaggctgtttcagatatg
attatggaactagcatcacatgcccagtttattacaactacttttaggcctgaactgctt
gaatcagctgataagttttatggtgtaaagttcagaaacaaggtcagtcacattgatgta
atcacagcggagcaggccaaagactttgttgaggatgataccactcatggttaa
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integrated database retrieval system
