Geotrypetes seraphini (Gaboon caecilian): 117359510
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Entry
117359510 CDS
T09159
Symbol
LRRC29
Name
(RefSeq) leucine-rich repeat-containing protein 29 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117359510 (LRRC29)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117359510 (LRRC29)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
DUF7885
LRR_Zer-1
F-box-like
LRR_8
LRR_EndoS
LRR_At5g56370
LRR_RPS2
F-box
LRR_2
Motif
Other DBs
NCBI-GeneID:
117359510
NCBI-ProteinID:
XP_033798320
UniProt:
A0A6P8QQZ1
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Position
4:141935236..142090301
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AA seq
642 aa
AA seq
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MMGSQELPLEIISHILSFLPLSDWKEASLVNRTWYFASQDTHLQRKVVYNLPASSSSLHI
IQGLARRCAPCISLNNLDSSNVSRDVIKYISFYLGPHLESLSLRGSCLTDSSFIALIQNC
PNLHSLDLSGCNSFFMSGTLLSKQDNVLKVREALNNLRELNLSGIRYLSDLIFNRLISCT
PRLEKLLLARCHITFEFDPYRGSRNYNSSSVLSFRNILTFLKERVNCMKALDLSSTGVTT
EAVRSLVQVEQLNLRELALQNCKDLSSEAVSILCKWQPNLTSLNLSGCSELSDSAVLAVS
SHLQSLQHLYLAKVRRLTDIGLRGIADLKELQSLDMSECSLLNGSELVKGLSSSHLHPKL
QSLSFASCCLLKDISVVSLAGSLGAYLRILDLSSCMTLTDISIQAISTHLNRLTILRLAW
CKELTDWGLLGIMNPDKELNPNTEKDNGPAFSRNFGNMGFFTPPQYLDEKPRLLTDSDLV
KSREKPSPSLKSLQCLQELDLTACSKLTDISITQVIHFPELKQLSLSLLGEISNCSLVAL
AMSCHCLEQLSLSHCTNLTDEGFSAAAHFLKRLQHLHLAGCNRLTDRCLKIIGAECKQLR
SLDVSMCNNISMASINLLQSQLPMLTHIQTRFLGGADLSFTL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcagccaggaactcccgctggagataatcagccacatcctgagcttcttgcct
ctatcagactggaaggaggcatcacttgttaatcggacatggtactttgcttcacaggac
actcatcttcagcgaaaagttgtttacaaccttcctgcctcctcatcttctcttcatatc
attcagggcctggcaagaagatgtgccccatgcatcagtctgaataatctggacagttcc
aatgtgtctagagatgtcatcaaatacatttcattctacctgggacctcacctggaaagc
ttatccctgcgtggcagttgtttgactgactcttctttcatagctctcatccagaactgt
cccaacctgcactcactggatctgagtggctgcaatagtttcttcatgtcagggaccctg
ctctctaaacaagataatgtccttaaagttcgagaggctctgaacaaccttcgagagctg
aacctttctggtattcgctatctgtctgatcttatcttcaaccgactgataagctgtact
cccagactagagaaactcttgctggctcgctgccacatcacctttgaatttgatccctat
cgaggctctagaaactacaattcatcctcagtgctatctttccggaacatcctgacattt
ctcaaggaaagagtaaactgcatgaaagctttggatttaagttccactggggttactaca
gaggcagtccgatctttggtacaagtagagcagttgaatctgagggagctggctcttcag
aactgcaaagacctctcctctgaagcagtcagtatcctctgcaaatggcagcccaatctg
accagcctcaaccttagtggctgctctgaactgtcagatagtgcagtgttggctgtatca
agccatctccaaagcctccagcacctgtaccttgcaaaggtcagaaggctgacagatatt
ggtctcaggggaattgcagacctcaaagagttacagagtctggatatgtctgagtgcagc
ctgctgaatggcagtgagctggtgaagggcttgtcttcttcacatcttcatcccaaactc
caatctctcagttttgcatcctgttgcttgcttaaagatatatctgttgtctcattggct
ggatcactaggtgcttatttgcgtatcttagacctttcctcctgcatgaccctcactgat
attagtatccaagcaatctctacccacctcaaccgcctgactatcctgcgacttgcttgg
tgtaaggagctgacagactggggcctgctgggaataatgaaccctgacaaggaacttaac
ccaaatacagagaaggacaatggacctgcatttagccgaaattttgggaacatgggtttc
ttcacacctccacagtatttggacgagaagcccaggttattaacagattcagatctggtg
aaatctcgtgagaagcccagcccatctttgaaatccttacagtgtttgcaagagcttgac
ttgactgcatgcagcaagctcactgatatcagcatcacacaggtgatccacttcccggag
ctgaagcagctctccttaagcttgttgggagagatcagtaactgtagccttgtggcactt
gctatgagttgccactgcctggagcagctgtcattatctcactgcacaaatctgactgac
gaaggtttcagtgcagctgctcactttctgaagcgacttcagcatctacacttggctggt
tgtaatcggctcactgaccggtgtctgaagatcattggtgctgaatgcaaacagctaagg
agcctggatgtttccatgtgtaacaacataagcatggctagtataaaccttctccagtca
cagcttcccatgttgactcacatccagacacgctttttgggtggagctgacctttctttc
accctgtga
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