Geotrypetes seraphini (Gaboon caecilian): 117359551
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Entry
117359551 CDS
T09159
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117359551 (RFWD3)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117359551 (RFWD3)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117359551 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
MLKL_N
PK_Tyr_Ser-Thr
Pkinase
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
zf-C3HC4
WD40
EIF3I
zf-C3HC4_2
WDR55
Beta-prop_EML_2
zf-RING_UBOX
Beta-prop_WDR3_2nd
zf-rbx1
DUF7792
WD40_Prp19
WD40_WDHD1_1st
zf-RING_5
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
zf-RING_11
Beta-prop_RIG_2nd
zf-C3HC4_4
Kinase-like
Beta-prop_SPT8
DUF7837
NBCH_WD40
RPW8
zf-ANAPC11
zf-UDP
Thiored_Isochorism
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
117359551
NCBI-ProteinID:
XP_033798410
UniProt:
A0A6P8QR82
LinkDB
All DBs
Position
4:170015712..170411418
Genome browser
AA seq
1151 aa
AA seq
DB search
MEKTEIIGALAKEIYSFYNQAQWNKKQCGRLVDRIKIIMLPVEFLQKQPQVDNDISEVLE
QLLQTLNNAKALVIKYASRGWWKKFFWAFTIKESFELINERLSDAAQGLSLSLQVEERKN
FLKKFEEVNRIKQDKKDAEADLEELKKYFEKAADSISDQVDIVNQDMKYVKEGMQQIGVN
VAEMLQLLEKQLNPSVLGATEIAKERLLIHEKLMETGNSICYRGEYLKSVVAIKQFKNPQ
VTDLSLARKTFWREVKMMKKFEHPNILHMYGICIDNTSAIPSFSIIIEYCERGTVREVLK
KEEMLTWETRIRMSQGAALGLYRLHQTTEKSVVHGNITSAKFLVDLRYSVKLAGFEISRT
ESSIKRMSNTNNQKEVHNSAYLSPQAMENINFIQNKPSEIYSFGIVLWEIAARSTPFKEM
AEEEMAMDLAPRNDNIAQSNLSLYEENTAGIEIASFPVQGLEHMTVILAEEETRSIVDSS
TNITTVLTDEIPGAMEGNEQGIQGVQLQRTLRANPRQQRRARGARRSASTRLQAPLDNFF
QVGRNRTGAAPAAMPSVEPVPLLDSNEGNSSDETLELSESDEEHNGGNSTTEVEENEQEV
QAFIPSVGANVEVQMDFSGNATSSAEYEPQDLGPGIHIKQKSLIKKTDATPAAYTEDEED
ADICAICFESWTNAGQHRLSALRCGHLFGFTCIDRWLRGHAGKCPQCNKKAKRSDIVVLY
AHSLKALDTSEQEKLKSSLEEEQMMRQKAELESAQCRLQLQIMTEKLNEFQKQVQELKMR
TVQHGPCASQQLNGSCSNLSSSLPSSQSQHQYSFYKAILVSQAGNCRVMAYCEQMSCLVV
SQPSPQATLIPGCGVKMISSANMKSSQYVPIHSKQIRGLAFSHRSDGLLLSAALDNTVKL
TSLMTNTVVQTYTAGRPIWSCCWCSDDNNYIYAGLINGSVLVYDLRNTSAFVQELKPQNS
RCPVVSLSYLPRMASATFPCGGILAGTLEGACFWEQKDAHFRPHLLPVESGGCTDIQIES
NTRHCLVTYRPGKTHSSLRCVMMELTSSHIAESDGDLTCSCYPVQTFNAGPTCKLLTKNA
IFESPDKDGNILVCAGDEASNSAMLWHAGTGNLLQKLQAHQPVLDICPFEVNQSNLLATL
TETMVKIYKWE
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacagagatcattggtgcccttgctaaggaaatctattcgttctataaccag
gcacagtggaataagaagcaatgtgggaggcttgtggatcgcataaagattataatgctg
cctgttgaatttctccagaagcagcctcaggtcgacaacgacataagcgaagtgctagaa
cagctcttacagaccttgaataatgccaaggctttggtaatcaaatatgcgtcaaggggt
tggtggaagaagttcttctgggccttcaccatcaaggaaagttttgaattgattaatgaa
cgcctgagtgatgctgcccagggattgtccctttcactgcaagttgaggaaagaaagaat
ttcttgaaaaaatttgaagaagtgaaccggataaaacaggacaagaaagatgcagaggct
gacctagaggagttaaagaaatactttgaaaaggccgctgacagtatctcggatcaggtg
gatatagtgaatcaggatatgaaatatgtgaaagagggcatgcagcaaataggagtgaat
gtagctgaaatgttgcaattattggaaaaacaattgaatccttctgttttgggtgccact
gagattgcaaaagaaagactcttaatccatgaaaagctcatggaaactggtaattcgatt
tgttatcggggggaatacctcaagtctgttgtagccatcaaacagttcaagaatccacag
gttactgatttaagtttggctcgtaaaaccttttggagagaagtaaaaatgatgaagaaa
tttgaacaccctaatattttgcacatgtatgggatctgcattgacaatacaagtgcaatt
ccttcattctccatcatcatagagtactgtgaaagaggcacagtacgagaggtgctgaag
aaagaggagatgctgacctgggagactcgcatcaggatgtctcagggggctgctcttggc
ctctacaggttacaccagacaacagagaagtctgtagtccatgggaatattactagtgct
aaattcttggtagacttacggtattctgtgaagttagcaggttttgagatatctagaacg
gagtcatccatcaagcggatgagtaataccaacaatcaaaaagaggtgcacaattcagct
tatctttctccccaggcgatggagaatattaactttatccagaacaagcccagtgaaata
tacagctttgggattgtcctttgggagattgcagccagaagtactccatttaaagaaatg
gctgaagaggaaatggctatggatctagcaccaagaaatgacaacatagctcagtctaac
ttaagtctgtatgaagaaaatactgctggcattgaaatagcatctttccctgttcaaggg
ttagagcatatgactgtaattcttgctgaagaggaaactaggtcaattgtggattcttca
actaacataaccactgtcctgacagatgagataccaggagcaatggaaggcaatgagcag
ggcatccaaggtgtgcagctgcagcgaacactgagggcaaatccccgtcagcagcgaaga
gctaggggggcacggagatctgctagtaccaggcttcaagcacctctggataactttttc
caggtgggtaggaatcggacaggagcagcaccagcagcgatgccatcagttgaacctgtg
ccactgctagacagcaatgagggaaatagctcagatgagacacttgagctgagtgaatcg
gatgaggaacataatggtggtaacagcacgacagaagtggaagagaatgagcaagaggtc
caagcttttataccaagtgtgggagctaatgttgaagttcagatggatttttctggaaat
gccacatcttcagcagagtatgaaccccaggatttggggccgggaatccacatcaaacag
aaaagcctaataaagaagactgatgcaactcctgctgcttacactgaggatgaggaagat
gcagatatttgtgctatttgctttgagtcgtggacaaatgctgggcagcaccgcctttct
gctctacgctgtggtcatctctttggctttacctgtattgatcgctggctgcgaggacat
gcagggaagtgcccacagtgcaataagaaagcaaaacgctcagacattgtggtcttatat
gcccactcacttaaagcattggacaccagtgagcaggagaagctgaagagttcactggaa
gaggagcagatgatgcgccagaaggccgagttggaatctgcacaatgccgtttgcagttg
cagatcatgacagagaaattaaatgaattccaaaagcaagtgcaggagctgaagatgcgg
acagtccagcatggcccctgtgcctcccagcaattgaatggatcctgctccaatctctcc
agcagccttccatccagccagagccagcaccaatatagcttttataaagctatcttagtt
tcgcaggctgggaactgcagggtgatggcatactgtgagcagatgagctgccttgtggtc
tcccagccatccccacaggccacactcatccctggttgtggcgtgaagatgatcagttct
gccaatatgaagagcagccaatatgtgccaatccacagcaagcaaattcgtggactagca
ttcagtcatcgatcggatggcctgctgctttctgcagccttggacaacactgttaaactc
acaagtttgatgacaaacacagtggtccagacttacactgctggtcgccccatctggagt
tgctgctggtgctcagatgacaacaactacatctatgctgggcttatcaatgggtctgtg
ctggtatatgaccttcgaaatacaagtgcatttgtacaggagctaaagccacagaattcc
aggtgtcctgtggtgtctttgtcatacctgcctcgtatggcctctgccacattcccttgt
gggggaatcctggctggtacattggaaggagcctgtttctgggagcagaaagatgcacac
ttccggccccatcttttaccagtagagtctggaggctgcactgacatccaaatagagagt
aatacacggcactgcctagtgacttacagaccaggcaagacacactcttctctacgctgt
gttatgatggagctaaccagcagccacatagcagaatcagacggtgacctaacctgttct
tgttatcctgtccaaacattcaatgctggcccaacctgtaagcttctcaccaagaatgct
atctttgagagtcctgataaagatggcaatattcttgtttgtgctggggatgaagcttcc
aactctgccatgctgtggcatgctgggacagggaatctccttcagaagcttcaggcacat
caaccagtgctggacatctgcccatttgaggtgaaccagagcaacttactagccactctg
acagagacaatggtaaagatctacaagtgggagtga
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