Geotrypetes seraphini (Gaboon caecilian): 117359564
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Entry
117359564 CDS
T09159
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117359564 (HPS1)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
117359564 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
DUF2535
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
117359564
NCBI-ProteinID:
XP_033798439
UniProt:
A0A6P8QRB1
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All DBs
Position
4:280909456..281017780
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AA seq
710 aa
AA seq
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MKCVLISSEGAEVLFYWTDEQFQAQLCSRFGQSRQDRQQMSAFGDCVNTLFAPLIISCAT
LLEKLSDTYTCFTAENGHLCVLHLFGDCLYIAVNGDGTENEDDMRRKLYVLKRLSEAHFG
LVTLDSHLFKKELRPSDSQQRIRVWRMFQSLLLTYSRLREEDQSFAVEAVERLIHPQLSE
QCIEFLDRQVIQHINGSPERGGEEVMHAFILVHTKLLAFFSSRNASAVRPADLLTLILIV
QDLYPSLSEAEELNPELEEKISTLRKSKDSEKIPVPRHKGNTSTPYTAEMDRREQEVEGS
ALPEEYYTPDPSPNTPNTGTMNWSEERIPIFQFVDAEVQVAEDILQTLVSKPEPCNPRRI
CLDSSLREGYCPMMPHSMYCLPLWPGISMVLLTKIPRSYVALALYQLLDGFSVLEKKLKE
GQEVNQILRSHPIMFELRQRTDKFVKSLGSREVLLQNSWLEFKNKIFSRNEHGSSKELLQ
ACGSVKHQLCSLYRQFFLTKPTGGTMSLSQSLQDQAMKLVQEKLIDWKNFLLVKSKRNIT
VVSYLEDFPGLVHFIYVDRTAGQMIAPSLSINEKSTAELGNSTLSNFIKMKIWSLIGLAR
RYLQKGYTTLTLRDGDYYCCYFLWFENEMGYKLEVIEVPVLSDDSSPIGMLAGDYYRKLL
HYYSKNHPSEIVKCYELLTVHLGIIPTEFLIQQCCDLARKLWEPSRIPLL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgttctgatcagcagcgaaggggctgaggtccttttctactggactgatgag
cagtttcaagcacaactgtgcagcagatttgggcaatctcggcaggataggcagcagatg
tcggcctttggagactgcgttaatacgctctttgctcctttgatcatttcatgtgccacc
ctgctggaaaaactcagtgatacatacacttgtttcactgctgagaatggacatctctgt
gttctgcacctgtttggagactgcctgtacattgcagtgaatggagatgggactgagaat
gaagacgacatgcgcagaaagctttatgttctcaaacggctcagtgaggctcattttgga
ctggttactctggatagccacctctttaaaaaggaactgcgtccctcagattcgcaacag
cgaatacgtgtctggagaatgttccagagccttcttttgacttacagtcgacttcgagaa
gaagaccaaagttttgcagttgaggcagtggaacgactcattcacccccagctatctgag
cagtgtattgagtttttggaccgccaggttatccaacacatcaatggcagtcctgaacga
ggtggtgaagaagttatgcatgccttcatacttgtccacaccaagctgcttgcatttttt
tccagtcggaatgcgagtgctgtgagacctgcggatctccttactctgatcctcattgtt
caagatctgtatccaagcctcagtgaagcagaagagctaaaccctgagcttgaagagaaa
atatctaccttgaggaagtcgaaggacagcgaaaagatacctgttccaaggcataaagga
aacacctctacaccttatacagcagagatggatagaagagaacaggaagtggaaggctct
gcattaccagaggaatactacacccctgatccttcccccaatacaccaaacacaggaact
atgaattggtcagaagagaggattcctatttttcaatttgttgatgctgaagtgcaggtg
gcagaagacatcctgcagactttggtctccaagccagagccctgcaatcccagaaggatc
tgcctagattcaagcttgcgtgaaggttactgtcctatgatgccacactccatgtactgt
ttacccctctggcctggaatctctatggtccttctcaccaagatcccccgcagctatgta
gcacttgccctctatcagctactggatggattttctgtactggagaaaaagctaaaagag
ggacaggaagttaaccagatccttcgttctcatccaattatgtttgagcttcgacaaaga
acagacaagtttgtcaagagcctgggcagcagagaagttctgttgcaaaacagttggctt
gaatttaagaacaaaattttctccagaaatgagcatgggagctctaaggaacttcttcag
gcttgtggcagtgtaaaacatcagctctgctctctgtatcgtcagtttttcttaacaaaa
ccaactggaggaactatgagtttgtctcagagtctacaggatcaggccatgaagcttgtt
caggaaaagttgatagactggaagaacttcttactggtgaagagtaagagaaatatcacc
gtggtttcctacctggaggactttccagggctggtacactttatttatgtggatcgcact
gcagggcagatgatcgccccatccctcagtatcaacgagaagtcgactgccgaactagga
aacagcaccttatcaaatttcataaaaatgaagatctggtcactgattggcctggcaaga
cggtacctccagaagggctacacaaccttgactctccgcgacggtgactattactgctgc
tacttcctctggttcgagaatgaaatgggttataagctagaggtgatcgaagtgcctgtc
ttgtccgatgattcttctcccattggcatgctggcaggagattattataggaaactgcta
cactattacagcaagaaccacccatcagagatagtgaaatgctatgaactgttgacagtt
cacttgggaatcatccctactgaatttttgatccaacagtgctgtgatcttgcacgaaaa
ctttgggaaccttcacgaatcccactattgtga
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