Geotrypetes seraphini (Gaboon caecilian): 117359624
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Entry
117359624 CDS
T09159
Symbol
CDH23
Name
(RefSeq) cadherin-23
KO
K06813
cadherin 23
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117359624 (CDH23)
04515 Cell adhesion molecules [BR:
gsh04515
]
117359624 (CDH23)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117359624 (CDH23)
Cell adhesion molecules [BR:
gsh04515
]
Cadherins
Major cadherins
117359624 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_pro
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
117359624
NCBI-ProteinID:
XP_033798671
UniProt:
A0A6P8RDQ4
LinkDB
All DBs
Position
4:complement(196753713..198426849)
Genome browser
AA seq
3320 aa
AA seq
DB search
MMCNSAACYFLFFLWIANSLPLGLAYNRPPSFQNYFFSTYLLISEDTPVGTSVTKLLAED
LDDDPLVFGVVGEEARRVFAVESETGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKQKAN
IQVGDVNDNSPMFHDQPYAVRIAENTPVGTPIFIVNATDPDQGTGGSVLYSFQPPSKYFA
IDKSRGIVSVLNELDYETIQAFQLQVNATDQDKVKPLSTLANMAITISDVQDMAPIFINL
PYSTNIYENSSPGTTVRIITAIDQDRGRPRWIGYTIVSGNTNSIFALDYISGALTLNGHL
DRENPLYSAGFSLTVKGTELNDDRTPSSAMVVTTFNILVIDLNDNAPVFNSTEYIVSIPE
LAQLGFALPLYIQVQDKDEGVNSAFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDY
ETIPRYEFSLFANESAQDHVGFARVKINLLNENDNRPIFSRSLYNVSLLENVTIGTTVLR
VFATDNDVGTFGKVNYFFSDDPDRFSLDKDTGVITLTGRLDFENSQRYTLTVIAKDGGGE
ETTGRVRINVLDVNDNVPAFQKESYLGAIRENEPSVVTVVRLRATDEDSSPNNQIAYSIV
EASAFRSVFDINILDGYGVISVTRPLDYELISNGVIYLTVMAKDAGSPSLNSTVPVSIEV
FDENDNPPMFSRSSYIITVLENIMAGATVLFLNATDLDRSREYGQESVIYSLDGSPQFRI
NARSGEITTTTLLDREFKSEYILIIRAVDGGVGPNQKIGIATVNITLLDINDNYPQWRDE
PYIINLVEMTPPNSDVTSVFAYDPDLAENGTVVYSIIPPNKFYVLNSTTGKIRTSGIVLD
RENPDPVEAELMRKIVISATDRGRPALRAASSATVMVNLLDLNDNDPTFSNLPFTAEVFE
GAPVGSSVFQVNVIDLDEGLNGQVTYIMQVGMPRMDFTINSTSGLIVSSTVLDREKISEY
YLRVVASDAGASPKSSTSTLTVRVLDVNDESPNFFPKIYNVSLAEDVTRAFTVVRLNCTD
ADVGLNAELSYFITGGNQDGKFSVGFRDGVLRTVVSLDRETMASYLLILEAIDNGPTENR
RTGTASVHITVLDVNDNKPIFLQSSYEASVSENISESTSIMQLKATDADEGENGRVWYRI
INGNSKNNFRINISSGLVMRGSRPLDRESNSSHILEVEAYNSDQGPMRSIIRVIVYIEDV
NDEVPVFTQQQYSRLGLRETAGIGTSVTVVRAIDRDTGNGGLVIYRIVSGSDGKFEIDES
TGLLTTIDYLDYETKTSYYMNISATDQALPYNRGFCNIYITLLNEPDEPVQFSNVAYEAV
IMENIAMGTEVVRIQARSIDNLNQLTYKFDSSTSSQALALFRIDGITGIIAVKGLVDREK
GDSYVLTVVADSGAPKQDSAVKVLITVLDENDNSPQFDITSDSLVSVAEDSIIGRRVALV
LARDPDAGNNGLVTFSLISGNVANAFEIHTTNITYGEVFVARPLDRELLDQYILKIQASD
SGSPPRKTRHLLTVNILDVNDNPPIINSPMGYNVSVSENVGGGTSVTWVQATDKDIGLNS
LLSYYITQGNEDLIFRIDRVTGEIATRPSPPDRERQSIYQLLITVEDEGNPALSATTTAY
VTILDENDSAPVFQQQLYEITLDEGSVTVNGTIVTVTAIDQDEGPNSTIAYAITGGNIIR
TFHIDNKTGLIRAMKELDYEISHGQYALIVTAADQCPILSSRLTSTTTVWVHVNDINDNR
PTFLRAYEGPFDLTEGQPGPRVWTLLATDGDSGLNGQVEYSIVSGDLLGEFVISPVDGDL
RVRKDCELDRENIAFYNITVMATDRGTPPLSSSVTIGVRVLDINDNDPVLLNLPLNITIS
ENTPVSTSLLRILASDADSGRNAILTFNITAGNRENVFYIHETTGAIYVNRQLDREKVPE
YRLTITVRDNPENMRNSRRDFDLLIISIADENDNRPLFTQNNYQAEVMENSPAGTTITVL
STSILAIDTDQGPNAVVAYRLLGSQSGLFNINSSTGVVSVKAGSVIDREAFSLPILELTL
VAEDIGKLNSTAGLIITILDDNDNRPVFNPAVINVHLRENSPPGFSIVQVRATDADSGLN
QQLIYRIESGAQDRFLIDKVSGVLQVANVTVDREERDTYRLIVVATDRAFVPLSSSATVN
ILIDDVNDCPPEFINPIQTVSVLESAAVGTVIAEVTALDRDLNARLEYYIIEIVAKDDTN
ALVSGQQGAFSVNFKTGAVMVKNTLNRELVATYEVTISVHDNASDIVERSVSVPNAKLTV
NVLDVNDNAPRFRPFGVTQFADRILEGATPGTTLLSVSAVDPDKGPNGQITYSLLNLAPA
GYVQLEDPMAGKIIANRTVDYEQVQWLNFTIRASDNGSPRKSAEVPVYLQIVDINDNNPI
FTQTSYQRPVFEDIPLGTIVLKITATDADSGRYALIQYSLVDGEGKFGINPSTGDIYILS
NLDREKKDFYTLTAIARDNPGDIASNRRENSVQVLITVLDINDCRPQFAKSQFSTSVYEN
EPEGTSVITMIATDPDEGDNGVLTYNIEGPGAEAFKIDQDTGLITSRRLLQSFERFNLTV
IATDKGRAPLWGTAMLQVDVIDVNDNRPVFVRPPNGTILHIKEEIPLKSTVYEVYATDKD
EGLNGAVRYSFLKTGAGNKDWEYFGIDSISGLIQTALRLDREKQAVYSLIIVGYDLGQPV
PYETMQPLQVALDDIDDNEPIFLRPPRGSLQYQALSVPEHSKSGTAVGNVSGAVDADEGS
NAIVYYFIADGNKENSFQLTPEGKLTVLKNLDREKESYYSVIVKASSNQNWTAPRSQRSR
LQTFNPSTDSTLQEVRIFLDDINDQPPRFTKSEYTAGVATDAKVGSELIKVVAVDADIGN
NSLVFYSILDIFYIKQHSNDSEEVKNIFVVGFEDGILRTFDLFATYSPGYFVVNIMAADL
AGHNDTAIVGIYILRDDQRLKIVINEIPDRVRQFEEEFIRLLSNITGAIVNTDDVQFHVD
KKGRVNFAQTDMLIHVVNRDTNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPATTAR
APEDLSTLQMAIIILAILLFLAAMLFIFMNWYYRTVHKRKLKAIVAGSTGNRGFMDVLDM
PNTNKYSFEGANPVWLDPFCRNMELAAQAEHEDDLPENLSDFTDLWNSPARTHGTFGREP
TASKPEDDRYLRAAIQEYDSIAKLGQIMREGPIKLIQNDLDEEERTSSPGTLRFRHKQPF
ELKGPDGIHIVHGSTGTLLTSDINSLPEDDQKGLGRSLETLNADSGSSTDRNARTESAKS
TPMHKMREIIMESPLEITEL
NT seq
9963 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtaactctgctgcctgctatttcctcttcttcttatggattgcaaactctctg
cctttgggtttggcctacaacagacctccaagtttccagaattatttctttagcacatac
ttgttgattagtgaagatactccagtgggtacctcagtcaccaagttacttgcagaggat
ctggatgatgaccccttggtgttcggagtagttggggaggaggccagaagagtgtttgct
gtggaaagtgagactggagtagtttggcttaggcaacccttggacagagagactaaatca
gaattcaccgttgagttttctgtcagtgacagccagggggtgataaaacagaaagcaaat
attcaagtaggcgatgtgaatgacaacagtccaatgtttcacgatcagccgtatgctgta
cgcattgcagagaacacaccagtgggaactccgatctttatcgtgaatgccacagaccca
gaccagggcacaggtggcagcgtcctttactccttccagcccccttccaaatattttgcc
attgacaagtctcggggcattgtgtcagtattaaatgaactggattatgagacaatccaa
gcctttcagctacaggtcaatgccacggatcaagacaaagtgaagcctctctcaacgttg
gctaatatggccattaccatctcagatgtacaagatatggctccaatcttcatcaacctg
ccttacagcaccaatatctatgagaattcctcaccgggaacaactgttcgtataataaca
gccattgaccaagatcgaggacgtcccagatggataggctacacaattgtatctggtaac
accaacagcatctttgcactggactatatcagtggagctctaactttgaatgggcacttg
gaccgagaaaatcctctctacagtgccggctttagccttactgtaaagggcacagaactg
aacgatgatcgcactccatccagtgccatggtggttactactttcaatattctggtgatc
gaccttaatgacaatgctcctgttttcaacagcactgagtacattgtcagcattcctgag
ctggcccagctgggctttgctctgcccctttatatccaggtgcaggataaggatgaggga
gtcaacagtgcgtttgaagtttacctagtgggaaacaactcgaaccatttcatcatctct
ccaacatcaattcagggcaaagcagatattcgtgtgcgggttgctgtgccgctggactat
gagaccattccacgctatgaattctctctgtttgccaatgagagtgctcaggaccatgtg
gggtttgcccgggtgaagattaacctcctgaatgagaatgacaatcgtcctatcttcagt
cggtcattgtacaatgtcagtctgcttgagaatgtcactattgggaccactgtgctgagg
gtcttcgcaacagacaatgatgttggcacatttggaaaggtgaattacttctttagtgat
gaccctgacaggttctctctggataaagatacaggagtgattaccctaactggccggctg
gactttgagaattctcagcggtatacgttgaccgtcattgccaaggatggcggtggtgag
gagaccacaggtcgtgtgcgaattaacgtcttggatgtcaatgataatgttccagctttc
cagaaagagtcctaccttggggcaataagggaaaatgaaccttctgtggtcactgtggtt
cgtctccgggcaacagatgaagattcttccccaaataaccagattgcatacagcatcgtg
gaggcttcagcttttcgcagtgtcttcgatatcaatatcttggatggctacggagtcata
tctgtgactcgccccctggattatgaactaatctccaatggtgttatttacctgacagtg
atggcaaaggatgctggcagcccatctcttaacagcacggtgcccgtcagcattgaggtc
tttgatgaaaatgacaacccaccaatgttcagccggtcatcctacatcatcacagtccta
gagaacatcatggcaggagccacagtattgttcttgaatgccacagatctggaccgctcc
agggaatatgggcaggagtccgttatttactcactggatgggtcccctcagttccggatt
aatgctcgctcaggagagatcaccaccacaactctgctggaccgagaatttaagtccgag
tatatcctgattatccgggcagtggatgggggcgtgggccccaatcagaaaattggcatt
gccacagtgaatatcaccttacttgacattaatgataattacccacagtggagagatgag
ccatacatcatcaacctggtagagatgacaccacccaactctgatgtcacttcggtattt
gcctatgaccctgacctggctgagaatggcacagtggtatacagcatcattccacccaac
aagttttatgtcttgaatagcacaacagggaagattcgaaccagtgggatcgtactggac
cgggagaaccctgaccctgtcgaagcggagctaatgagaaagatagtcatctcagctact
gacagagggaggccggctttacgtgctgcgagcagtgctacggtcatggtgaatctcttg
gatctcaatgacaatgatcccactttcagcaatctgccttttactgctgaagtctttgag
ggggcccctgttggatcctcagtcttccaggtgaatgttattgaccttgatgagggtttg
aatggccaggtgacatacatcatgcaagtgggcatgccacgcatggacttcacgatcaat
agcaccagtggactgattgtgtcctcaacagttctggacagggagaagatctcagagtac
tacttacgtgtggtagcaagtgatgcaggagcatcacccaagagttctaccagcactctg
actgtccgagttttggatgtcaatgatgaaagccctaacttttttccaaaaatctacaat
gtctcattggccgaggatgtaacccgagcctttacagtggtccgtctgaactgcactgat
gctgatgtgggtctaaacgctgagctcagttacttcatcactggaggaaaccaggatgga
aaattcagtgttggtttccgggatggagtgctcaggacagtagttagcttggatcgagag
actatggcgtcatatttattgattctagaagccattgataatggccccacagagaacagg
cgcactgggacagcctctgtgcacattaccgtgctggatgtcaatgacaacaagccgatc
ttcctgcagagcagctatgaggccagtgtttcagagaacatctcagaatctaccagcatc
atgcagctgaaagctacagatgcagatgaaggtgaaaatggaagagtatggtaccggatc
atcaatgggaacagtaagaataactttcgcatcaatatcagcagtgggctggttatgcgt
gggtcccgccctctggacagagaaagcaattcctcacatatcctggaagtagaagcatac
aacagtgaccagggcccaatgaggagcatcatcagggtgattgtctacatagaagatgtt
aatgatgaggtgccagtcttcacacaacagcagtacagtcgcctgggactaagggaaact
gctggcattgggacttctgtcactgttgtacgagcaatagatcgtgacacaggtaatgga
ggtctggtgatttataggattgtgtccggctcggatgggaagtttgagattgacgagagt
acaggcctccttactaccatagattacctggactatgagactaaaaccagctactatatg
aacatctcagccactgaccaggcactcccctacaaccgtggcttctgtaacatctacatc
accctgctgaatgagccagatgagccggtgcagttttcgaacgtagcatatgaggctgtt
attatggaaaacattgcaatgggcactgaggtggtgcgcatccaggcacgatccattgac
aatttaaaccagctcacttataagtttgattcaagcaccagctcccaagcactggcactt
ttcaggattgatggaatcactggaattattgcagtgaaaggtctggtggaccgtgaaaaa
ggtgactcttatgtcttaacagtagtggcagatagcggtgcgccaaagcaagactcagct
gtgaaggtcctgatcacagtgctggatgagaatgacaacagcccacagttcgacatcacc
tcagactctttggttagtgtcgcagaggacagtatcatagggaggcgggttgccctggtc
ttggctagagatcccgatgcaggaaataatggactggtgaccttttctctcatatcggga
aacgtggctaatgcctttgagattcacactactaacataacttatggtgaagtttttgtg
gcgaggccattggacagagagctgctagaccagtacatactgaagatccaagcatcagac
agtggttctcctcctcgcaagacaagacatttgctaactgtcaacatcttggatgtgaat
gataacccacccatcatcaatagcccaatgggctacaatgttagtgtcagtgagaacgtt
ggtggtggcacatctgtgacttgggttcaggcaacagacaaggacatcgggcttaacagc
ctcctctcctactacatcacccagggaaatgaggacctcatcttccgaatagaccgggtt
actggtgagattgctacaaggccctcgcctccagaccgtgagcggcagagcatctatcag
ctgctcattactgtagaggatgaaggcaatccagccctttcggcaaccacaactgcgtat
gtgactatcctggatgaaaatgacagtgccccagttttccagcaacagttgtacgaaatc
accttagacgagggctctgtcacagtgaatggcaccattgtcaccgtcacagcaattgat
caggatgaaggcccaaacagcaccatagcatatgccatcactggcggcaacataattcgt
acctttcatatagacaacaagacggggttgatacgtgcaatgaaggagctggactatgag
ataagccatggacaatacgcattaattgtgactgctgcagatcagtgtcccattctctcc
tcccgtctcacctcaaccactacagtttgggtccacgtgaatgacataaatgacaacaga
cccacttttcttcgggcctatgagggtccctttgaccttacggaaggacagccaggaccc
agagtgtggacattattggccaccgatggagactctgggttgaatggacaggtggaatac
agcatcgtatctggtgatctgcttggtgagtttgtgatctcacctgtggatggggatctg
cgagttcgaaaagactgtgagctggaccgggaaaatattgctttttataatatcaccgtc
atggctacagatagaggaaccccaccgctgagctcctcggtcaccataggagtgcgtgtt
ttagatattaatgataatgaccctgtactcttaaatctaccactgaatataaccatcagc
gagaatacaccagtttctacctctctcctccgtattcttgccagtgatgctgacagtggg
cgaaatgctatcctgaccttcaacataacagcaggaaacagggaaaatgtcttctacatt
catgagactactggtgctatctatgtaaaccgccagctggacagagaaaaggttcctgaa
tacaggctgaccatcacagtgagggataatccagaaaatatgcgcaactccagaagggac
tttgaccttctaattatttctatagcagatgaaaatgataaccgcccactgttcactcaa
aacaattatcaggcagaagttatggaaaactcacctgcaggaactacgatcacagtattg
agcacatccattctagctatagatactgaccaaggaccgaatgcagttgtggcatatcgt
ctcctgggtagtcaatcaggcctgtttaacatcaacagcagcacaggcgttgtttcagta
aaggctggaagcgttattgacagggaagccttctccctccccattttggagcttaccctg
gtggctgaggatattggcaagttaaatagtacagctggtctgattatcaccatacttgat
gacaatgacaacaggccagtcttcaacccagcagtcataaatgtccatctacgggagaac
agtccaccaggtttctctattgtgcaggtaagagccaccgatgcagatagtggcctaaat
caacagctgatctaccgaatcgagagtggtgctcaggacagattcctcattgacaaagtt
tctggtgtgttacaagttgctaatgtcacagtggacagagaagaaagagatacatataga
ttgattgtggtagcaacagatcgtgccttcgtccctctctccagcagtgctaccgtcaac
atactcattgacgatgtcaacgattgtcctccagaattcatcaacccaatccaaacagtg
agtgtgcttgagtcagcagcagtgggcacagtgatcgctgaggtcaccgccttagacagg
gaccttaacgcccgcttggaatactacatcattgaaattgtggcgaaagatgacaccaat
gcccttgtttctggtcaacagggagcgttctctgttaacttcaaaacaggagcagtgatg
gtgaagaacactttaaacagggagctggtggccacctatgaagtcaccatttctgtccat
gataatgccagtgacattgttgagcgctcggtcagtgtgccaaatgctaagctgacagtg
aatgtcctggatgtcaacgacaatgcccctcgcttccgcccttttggggtgacacagttt
gctgatagaattttggaaggtgccaccccggggacaacactgctttccgtatcagctgtg
gatccagataaaggtccaaatggacaaatcacatactcgctgctgaatctcgcaccagca
ggttatgtccaacttgaagaccctatggcaggaaagatcattgcaaacagaacagtggat
tatgaacaggtgcagtggttgaatttcactatcagagcttccgataatgggtctccccgg
aaatcagctgaggtcccagtatacctacaaattgtggatatcaatgacaacaatcccatc
ttcacacaaacatcttaccagaggcctgtctttgaggacatcccgctgggtacaatcgtt
ctaaagatcacagctactgatgctgattcaggacgctatgcacttatccagtacagcctg
gttgatggagagggcaagtttggaataaatcccagcacgggggatatttacattctgtcg
aacctggaccgagaaaaaaaagatttctatacactgactgctattgccagagataaccca
ggggacattgccagcaaccgccgtgagaactctgtgcaggtactgatcacagttctggac
atcaatgactgcagaccccaatttgccaaaagccagttcagtaccagtgtttatgagaat
gaacctgaagggacttctgtcatcactatgatagccacagacccagatgaaggtgacaat
ggggtgttgacttacaacatcgagggcccaggagctgaggcatttaagattgatcaagat
acagggctaataacatctcgcaggcttctgcagtcatttgagagattcaatcttactgtg
atagcgacggacaaaggcagagcacctctctggggaacagccatgctccaagtggatgta
atcgatgtcaatgacaaccggccagtatttgtcagaccaccaaatggtactatcctccac
atcaaagaggaaatacctctaaaatctactgtttatgaagtatatgccacagacaaggac
gagggcttgaatggagctgtgcgttacagctttttgaaaactggcgcagggaacaaagac
tgggagtacttcggcattgattctatcagtgggctcatccaaacggcgcttcgtctggac
cgggagaaacaagctgtgtacagtttgatcatcgtcggttatgacctgggccaacctgta
ccttatgagaccatgcagcctttacaagtggcactagatgacattgatgacaatgagccc
atcttcttgagacctccaagaggaagcctccagtaccaagctctctctgttccagaacac
tccaaatcaggcactgcagtgggaaacgtcagtggtgcggtggatgcagatgagggctct
aatgccattgtttattacttcatagcagatggcaacaaggagaacagtttccagctgact
ccagagggaaagttgacggtgctgaaaaatttagaccgagaaaaggaatcttactattct
gttatcgtcaaagcctccagtaaccagaattggacagcccctcggagtcagaggtccaga
ctgcagacctttaatcccagcacagactccaccttgcaagaagtacgaatatttctagat
gatatcaacgaccagcccccacggttcactaagtctgaatacactgcaggagtggcaacc
gatgctaaggtgggttcagagctaatcaaagtggtagcagtggatgcagacataggaaac
aacagcctggtcttctatagcatccttgatatattctatattaaacagcattccaacgac
tcagaggaagtgaaaaatatctttgtcgtaggctttgaggatgggatcctgagaacattt
gacctttttgcaacatacagccctggctattttgtggtgaatatcatggcagcagatttg
gcggggcacaatgacacagctattgttggaatctacatcctgagggatgaccagcggctc
aagatagttatcaatgagatcccagatagggtgcgccagttcgaggaagagttcattcgt
ttgctctcaaacatcacgggtgctattgtgaacactgatgacgtgcagttccatgtagac
aaaaaaggacgggtgaactttgctcagaccgatatgctgatccatgtggtgaaccgagat
accaaccgtatcctggatgtggaaagagtaattcagatgattgatgagaataaggagcag
ctgcggaacctcttcaggaactacaatgtattagacgttcagcctgcaacaacagcccga
gcccctgaggacctgtccacactgcagatggcaattattattctggccattctcctcttc
ctggcagctatgctcttcatcttcatgaactggtactacaggacagtacataaaaggaag
ttaaaagcaattgtggctggctctactggtaaccgaggcttcatggatgtcctagatatg
ccgaacacaaataagtactcatttgagggtgccaaccctgtgtggctggatcctttctgc
aggaacatggagctggctgcacaagcggagcatgaagatgatcttcctgagaacctaagt
gacttcacggatctctggaatagcccagccaggactcatggtacttttgggcgagaacct
actgcttccaaaccagaagatgacagatacttgcgagcagccatccaggagtatgacagt
attgccaaactgggccagatcatgcgtgaaggacccatcaagttgatacagaatgatttg
gatgaagaagaacgaacctccagcccaggcacccttcgttttcgacacaagcagcctttt
gagctgaaaggaccagatggtattcacatagttcatggtagcacaggtaccctcttgacc
tcagacattaacagcctaccagaggacgatcagaaaggtctaggccggtccctggaaacc
ctcaatgcagacagcggatcctctactgacagaaatgctcgtacagaatcggctaagtct
acacctatgcacaaaatgagggagatcattatggaaagcccattggagatcacagaatta
tga
DBGET
integrated database retrieval system
