Geotrypetes seraphini (Gaboon caecilian): 117359775
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Entry
117359775 CDS
T09159
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117359775 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117359775 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117359775 (RPGRIP1L)
Cilium and associated proteins [BR:
gsh03037
]
Primary cilia and associated proteins
MKS complex
117359775 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
Motif
Other DBs
NCBI-GeneID:
117359775
NCBI-ProteinID:
XP_033798892
UniProt:
A0A6P8QJS8
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All DBs
Position
4:complement(59011744..59338411)
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AA seq
1270 aa
AA seq
DB search
MSAPTDETAGDLPVKDVGLSLAGIGGLQESSVAQIVRDRQAVSRISREELEDRFLRLHDE
NILLKQHARKQEDKIKRMATKLIRLVKDKKKYEQVGSGPKRSGRDVELEEIIEQQQENIR
GLEKQNEGLQNRLISTKQQLQIQGHRHTPYNYVQSRINSGLRKVTEGVQESLRKGMRMQD
PEMISRSTQAVLPRYGHSLLEQARAEIRDLENMIESQKGQMEEMEHSTDILRDHIRRKEK
EYEESLLQLREQQATDQRSTIRENVEMIKLQKQLAEKCHAVTAMEGKLLQFQENQKSLNA
SYDALLSKVDELSAQLKEERFKCLHLEKQLQSTNFSEIRIEELHGRINDLEKERDLLKEN
YDKLYSSAFDVTQGHEQKWKLKEQQLKLQIAQLEAALKSDLEDKNEILDRVKLERDQNEK
LSQENKDLQLRYLEHKQQLDELKNRMTFFTKESDIDMAELSEALMLIKVRKQQKNGDLTF
LEKIEDDINKDLNQSMRELQATHAETVQELEKTRNMLIIQHKINKDYQAEVEEVTQKMEG
IQQDFERKLQQYAQLLDIRTARIRQLEAQLKDIAYGTKQYKFKPEITADDHVDEFDKTIH
LERGENLFEIHINKVLFSSGAVQNFGDQEPATFCTYAFYDFELQTTPIILGLQPAYNFTS
QYLVRVDDFFLQYMQKNTISLEVHQAHGTDYKTIAACQLKFHEILEKNGKIFCTALLIGI
GGDVQNFGTVEYWIKLRVPMSQAIRLYKERAKALGYIASNLKEPEPMQLELRTAQESTPV
LMDGNLNELHITIKGCNNLQILGSHLQPNPYAVYRFFDFADHDTLIIASSNNPQFDDHMC
FPVPMNADLDQYLKSESLCFYVFDDGETKEGVYIGKTNVPLISLAHDKCISGIFQLTNNE
GHNSGTINVILKWRHSYLPPSGSVLTADLLNFLPKEEPIPVRLSTEEDLQTPELHAAISS
VTVPKPKPRQKVVPADKKVSFLDMALPQNINSGDTPEELAQQTKKDSSTTLHLPEVIHEK
VLDDMKINEIEEKIQQEKEEGHSQLSEGQFAEQNSVTSDEETEITEELDAGDEEGIQMTG
ANEITVSDSDDAIVPSPVSKDIKQPSERIRIEIISLSFNDGSEVLLDDTIKKLFVEYRLL
NFAKEETPVSLPKLKGGQWIHYNFSNVIYVDKENNQERRDVLKKLLEEPESNNRSVQFTV
VSDPSDDEQDLECEDIGFAYVSLTEIFKNGNDVIEQNIDIFDSQSNGEIIGKLKVTVEVL
HVLRSVYKEH
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccaacagatgaaactgctggagacctgcccgtgaaagatgttgggttgagc
ctagctggaataggaggactgcaagagtcatcagttgcacagattgtgagagataggcaa
gcagtttctcgaattagccgtgaggagctagaagatcgatttcttcgtttacatgatgaa
aacattctgcttaaacaacatgcacgaaagcaagaggataaaatcaaaagaatggccacc
aagttaatacggcttgttaaagataaaaagaaatatgagcaagttggtagcggccccaag
cggtcaggacgagatgtggaactagaggaaataattgaacaacagcaggagaacattcgt
ggactcgagaaacaaaatgaaggtcttcaaaatagattaatatcaactaaacagcagctc
caaattcagggccacaggcacacaccatacaactatgtgcaatctcgtatcaattcgggt
ctcaggaaagtgactgaaggagtgcaagaaagcttgagaaaaggaatgagaatgcaagat
ccagagatgatttcaagatctactcaagctgtacttcctagatatggacatagtctgctt
gaacaagcaagggctgagataagagatctagaaaatatgatagaatcacagaagggacaa
atggaagagatggagcattcaacagatatccttagagatcatataagaagaaaagaaaag
gaatatgaagaatctcttttacaacttagagagcaacaagcaacagatcaaagatcaact
attcgagaaaatgtggagatgatcaagctccaaaaacaactagctgagaaatgtcatgca
gtaacagcaatggaaggaaaacttctacagtttcaagagaatcaaaaaagtctcaatgcg
agctatgatgctttgttgtcaaaggtggatgagctaagtgcacaacttaaagaagagcgc
ttcaagtgtcttcatcttgagaagcagttgcaatcaacaaatttttctgaaataagaata
gaagaattgcatggcagaattaatgacctagaaaaggagcgggatcttttaaaggaaaac
tatgataaactatacagtagtgccttcgatgtgacccagggccacgaacagaaatggaaa
ttaaaggagcagcaattgaaactgcagattgctcagcttgaggctgccttaaagtctgat
ctagaagataaaaatgaaatccttgatagagtaaaacttgaaagagatcaaaatgagaag
ctaagtcaagaaaacaaagacttgcagttgcgctatctggaacataagcagcaattagat
gaattaaaaaaccgcatgacatttttcaccaaggagagtgatattgatatggcagaactt
agtgaagccctgatgcttatcaaggtgcgaaagcagcaaaagaatggagatcttacattt
ctagaaaaaatagaagatgacattaataaagatttgaatcaatcaatgcgggagctacaa
gcaacacatgcagaaacagtacaagaacttgaaaagacacgaaatatgttaataatacaa
cataaaataaataaagattaccaggctgaagttgaagaagtaacacagaagatggagggt
attcagcaagattttgaacgaaaactgcaacaatatgcacaactgcttgatatcagaact
gcaagaattcgacagctggaagctcagctgaaggatattgcctatggtactaagcaatac
aaattcaaaccagaaatcacagcagatgatcacgttgatgaatttgataaaactattcac
ttggaacgaggagagaatctatttgagatccacatcaataaagtgttattttcctctgga
gctgtacaaaactttggcgatcaagagcctgcaacattctgcacttatgcattctatgac
tttgagctccagactactccaataattcttggtcttcaaccagcatacaattttacatcc
caatatttggtacgggtagatgacttttttttgcagtatatgcagaagaataccatcagc
cttgaagttcatcaggcacatggcacagattataaaactattgctgcatgccaactgaaa
ttccatgaaattctagagaagaatggtaagatcttctgcacagcccttctgattggtatt
ggaggtgatgtccagaattttggcactgtggaatactggatcaaattgcgagttcctatg
tctcaagctattagactgtacaaagagcgggcaaaggcactgggatacatagcatccaat
ctcaaggaaccagaaccgatgcaactggaactcagaactgcccaagagagcactccagtt
ctaatggatggaaatttaaatgaactgcacattacaataaaaggctgcaataatctacaa
atcctaggaagccatctacagccaaacccttatgctgtgtacagattctttgattttgct
gatcatgatacacttatcattgctagcagcaataatccacagtttgatgaccacatgtgc
ttcccggtaccaatgaatgcagacctggaccaatacttaaaatcagaatcactgtgtttt
tatgtttttgatgatggagaaacaaaagaaggtgtttatattggaaaaaccaatgtgcca
cttatctctttagctcatgacaaatgcatttcaggtatctttcaactcacaaataatgaa
ggacacaacagtggcactatcaatgttatattgaaatggaggcattcttatcttccacca
agtggatctgtattgacggcagacctactaaattttctaccaaaggaagagccaattcca
gttagattatcaacagaggaagatttgcagactccagagttacatgctgcaatttcatca
gttacagtgcccaaacctaaaccaaggcaaaaagtagttccagcagacaagaaagtgtca
tttttggatatggcgttacctcagaatataaactcaggtgatactcctgaagagttagca
caacaaacaaaaaaggatagctcaactacactacatcttccagaggttatacatgaaaaa
gtgctagatgatatgaaaataaatgaaattgaagaaaaaattcagcaagaaaaagaggag
ggtcattctcagttatccgagggtcagtttgccgagcagaattctgtcacctcagatgaa
gaaacagagataacagaagaactggatgctggagatgaagaagggatccagatgacaggt
gccaatgaaataacagtgtcagacagtgatgatgcgatagttcccagcccagtatccaaa
gatatcaaacagccatcagaaagaattcgcattgagattatctccctaagcttcaatgat
ggttctgaagtattattggatgatactataaagaagttgtttgtggaatacagactcctc
aattttgctaaagaagagactccagtttcactgccaaaactcaaaggtggtcaatggatt
cactataattttagcaatgtgatttatgtggataaagagaataaccaagaaagaagagat
gtcttaaagaaattacttgaagaacctgagtcaaataatagaagtgtgcagtttactgtg
gttagtgacccttcagatgatgagcaagatcttgaatgtgaagatattggctttgcttat
gtcagtctaacagagatatttaaaaatggaaacgatgttattgaacaaaacattgacatt
tttgattctcagtccaatggtgaaattattggaaaactgaaagtaactgtggaagtcctt
catgttctgcgctcagtctataaagaacactag
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